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The map label for this gene is qseB [H]

Identifier: 77459994

GI number: 77459994

Start: 4270074

End: 4270742

Strand: Reverse

Name: qseB [H]

Synonym: Pfl01_3772

Alternate gene names: 77459994

Gene position: 4270742-4270074 (Counterclockwise)

Preceding gene: 77459995

Following gene: 77459993

Centisome position: 66.33

GC content: 64.72

Gene sequence:

>669_bases
ATGCGCTTGCTTCTGGTGGAAGACCACGTACCGCTGGCCGACGAACTGCTCGCCGGCCTGCAACGTCAGGGCTACGCGGT
GGACTGGCTGGCGGACGGGCGCGACGCGGTCTATCAGGGCAGCAGCGAGCCCTATGACCTAATCGTCCTCGACCTCGGTC
TGCCCGGCGTGCCGGGGCTTGAGGTGCTGGCGCAATGGCGCGCTGGCGGTCTGACGATTCCGGTGCTGATTCTCACCGCC
CGCGACTCCTGGGCCGAGCGCATCGAAGGCCTGAAGGCCGGCGCCGACGATTACCTGACCAAACCTTTCCACCCGGAAGA
ACTGTACTTGCGCATCCAGTCGCTGCTGCGCCGCTCCAAGGGCCAGGCCAACCAGCCGACGCTCAAGGCTGCCGGGCTGC
ACTTGGACGAGGGCCGTCAGTGTGTCGTGCGCGACGGTGCCGACATTCAGCTGACCGCCGCCGAATTCCGTCTGCTGCGC
TACTTCATGCTGCACCCGGAGCAGATCCTTTCCAAGAGCCACCTCGCCGAACACCTCTACGACGGTGAGACCGAGCGTGA
TTCCAACGTGCTGGAAGTCCACGTCAACCACCTGCGGCGCAAGCTCGGCAAGAGCGTGATCGAAACCCGTCGTGGTCAGG
GTTATCTGTTTGGCGGACAGGCTTCGTGA

Upstream 100 bases:

>100_bases
CATTTATGAAGTCGAGTTGCTGACCGTCGAAGGTGTGGCCCGCGAGCTGCACCTGAAGGCCGACACCGGCGAACTCGTGA
AAGACAAGGAAGATTGACCG

Downstream 100 bases:

>100_bases
GATCGATCCAGCGCCGCTTGAGTCTGGGGTTGATCAGCGTGCTGGTGGTCGTCGGCGTACTGCTGGCGCAAACCAGTCTG
TGGTTGTTCGAGGTGGGATT

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MRLLLVEDHVPLADELLAGLQRQGYAVDWLADGRDAVYQGSSEPYDLIVLDLGLPGVPGLEVLAQWRAGGLTIPVLILTA
RDSWAERIEGLKAGADDYLTKPFHPEELYLRIQSLLRRSKGQANQPTLKAAGLHLDEGRQCVVRDGADIQLTAAEFRLLR
YFMLHPEQILSKSHLAEHLYDGETERDSNVLEVHVNHLRRKLGKSVIETRRGQGYLFGGQAS

Sequences:

>Translated_222_residues
MRLLLVEDHVPLADELLAGLQRQGYAVDWLADGRDAVYQGSSEPYDLIVLDLGLPGVPGLEVLAQWRAGGLTIPVLILTA
RDSWAERIEGLKAGADDYLTKPFHPEELYLRIQSLLRRSKGQANQPTLKAAGLHLDEGRQCVVRDGADIQLTAAEFRLLR
YFMLHPEQILSKSHLAEHLYDGETERDSNVLEVHVNHLRRKLGKSVIETRRGQGYLFGGQAS
>Mature_222_residues
MRLLLVEDHVPLADELLAGLQRQGYAVDWLADGRDAVYQGSSEPYDLIVLDLGLPGVPGLEVLAQWRAGGLTIPVLILTA
RDSWAERIEGLKAGADDYLTKPFHPEELYLRIQSLLRRSKGQANQPTLKAAGLHLDEGRQCVVRDGADIQLTAAEFRLLR
YFMLHPEQILSKSHLAEHLYDGETERDSNVLEVHVNHLRRKLGKSVIETRRGQGYLFGGQAS

Specific function: Member of a two-component regulatory system qseB/qseC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=44.954128440367, Blast_Score=186, Evalue=1e-48,
Organism=Escherichia coli, GI1790552, Length=217, Percent_Identity=42.8571428571429, Blast_Score=157, Evalue=5e-40,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=38.0090497737557, Blast_Score=154, Evalue=5e-39,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=36.1990950226244, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=37.10407239819, Blast_Score=142, Evalue=1e-35,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=34.5291479820628, Blast_Score=138, Evalue=3e-34,
Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=35.2422907488987, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=33.4841628959276, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=36.4035087719298, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=31.2775330396476, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1789809, Length=230, Percent_Identity=32.1739130434783, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=30.4347826086957, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=32.5892857142857, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI145693140, Length=239, Percent_Identity=29.2887029288703, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1790437, Length=130, Percent_Identity=32.3076923076923, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1788550, Length=116, Percent_Identity=29.3103448275862, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24796; Mature: 24796

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLVEDHVPLADELLAGLQRQGYAVDWLADGRDAVYQGSSEPYDLIVLDLGLPGVPGL
CEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCEEEEEEECCCCCCCHH
EVLAQWRAGGLTIPVLILTARDSWAERIEGLKAGADDYLTKPFHPEELYLRIQSLLRRSK
HHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHC
GQANQPTLKAAGLHLDEGRQCVVRDGADIQLTAAEFRLLRYFMLHPEQILSKSHLAEHLY
CCCCCCCHHCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DGETERDSNVLEVHVNHLRRKLGKSVIETRRGQGYLFGGQAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
>Mature Secondary Structure
MRLLLVEDHVPLADELLAGLQRQGYAVDWLADGRDAVYQGSSEPYDLIVLDLGLPGVPGL
CEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCEEEEEEECCCCCCCHH
EVLAQWRAGGLTIPVLILTARDSWAERIEGLKAGADDYLTKPFHPEELYLRIQSLLRRSK
HHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHC
GQANQPTLKAAGLHLDEGRQCVVRDGADIQLTAAEFRLLRYFMLHPEQILSKSHLAEHLY
CCCCCCCHHCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DGETERDSNVLEVHVNHLRRKLGKSVIETRRGQGYLFGGQAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]