Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77459991

Identifier: 77459991

GI number: 77459991

Start: 4264919

End: 4266235

Strand: Reverse

Name: 77459991

Synonym: Pfl01_3769

Alternate gene names: NA

Gene position: 4266235-4264919 (Counterclockwise)

Preceding gene: 77459993

Following gene: 77459990

Centisome position: 66.26

GC content: 61.5

Gene sequence:

>1317_bases
ATGAATGCAGTGATTGCTGCGGTCGGCGTCATGCTGATCCTCAGCCTGTCCCGGGTGCATGTGGTGATCGCGTTGATCGT
CGGTGCGCTGGTCGGTGGCCTGACCGGTGGTCTGGGCATCGACGCCACGCTCAAGGCTTTCAACAGTGGCCTGGGTGGCG
GGGCGACAGTGGCGTTGTCCTACGCGTTGCTCGGCGCTTTCGCCGTGGCGATTGCCAAGTCCGGCCTGGCCCACGCGCTG
GCCGACAAGGCCCTGGCGATGGTCGACCGCCAGCATGCGACCGGTGGCGGCAGCGTCAAATGGCTGCTGATCGGCCTGCT
GTGGGTGGTGGCGATCGCGTCGCAGAACATCCTGCCGATTCACATCGCGTTCATTCCGCTGCTGGTGCCGCCGCTTCTCT
ATGTATTGACCAAGCTGCAACTGGACCGACGCCTGATCGCCTGCGTCATGACCTTCGGCCTGATCACGCCGTACATGTTC
CTGCCGGTGGGCTTCGGCAACATTTTCCTCAACGAGATCCTGCTGGCCAACGTTGCCCGCAGTGGCGTGGACATCAGCGG
TATCAACGTCACCCATGCCATGGGGATTCCGGCGCTGGGCATGCTGGTGGGGCTGGGCATCGCTTTTATCAGCTATCGCA
AGAAGCGCGTCTACGACTTGGGCAAAATCGAGCAGGTCGAGCAGGTGGCGGTGCAGTACAACCCGCGAAGCCTGTTGATC
GCCGGAGTCGCCATTGCCGCAGCCTTCATTATTCAGTTGCTGCTGGATTCGATGATTATCGGGGCGCTGACCGGTTTCCT
GATCTTTTCAGCGTCGGGCATCGTCAAATGGCGCGAGACGGATGACCTGTTTACCGAAGGCATGAAGATGATGGCGATGA
TCGGCTTCATCATGATCGCCGCTTCCGGATTCGCCGAAGTGATGAAGGCCACCGGCGAGGTGCAGACCCTGGTCGAGTCT
TCGGCGTCGTGGATCAATCACAGCAAGGGCATCGGTGCGTTGCTGATGCTGCTGGTCGGTCTTCTGGTGACCATGGGCAT
CGGCTCGTCGTTTTCCACGGTGCCGATTCTGGCGGCGATTTTCGTGCCGCTGTGCGTGCAACTGGGCTTCAGCCCGATTG
CCATTGTCTGCATCGTCGGCACGGCCGGTGCCTTGGGCGATGCCGGTTCGCCCGCGTCCGACTCGACCCTTGGCCCGACC
TCCGGTCTGAACATCGACGGCCAGCACCATCACATCTGGGACACCGTGGTCCCGACTTTCCTGCATTACAACCTGCCGCT
GCTGGCGTTTGGCTGGGTGGCTGCGATGGTCCTTTAA

Upstream 100 bases:

>100_bases
ACCCTCTATGCAAATCCGCTGGCGACCTTCGTGGCTTGTCGGCCGGACTCATTCTGTCTGGCGGTGAATGGCTTTACCGT
CGTGTTTTCGAGGTAGTGAA

Downstream 100 bases:

>100_bases
CTCCCGTGATCGTTCCCACGCTCTGCGTGGGAACGCCTCTTGTGACGCTCTGCGTCACGCTTTGGGACGCGGAGCGTCCC
GGGCTGCATTCCCACGCAGA

Product: Na+/H+ antiporter NhaC

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MNAVIAAVGVMLILSLSRVHVVIALIVGALVGGLTGGLGIDATLKAFNSGLGGGATVALSYALLGAFAVAIAKSGLAHAL
ADKALAMVDRQHATGGGSVKWLLIGLLWVVAIASQNILPIHIAFIPLLVPPLLYVLTKLQLDRRLIACVMTFGLITPYMF
LPVGFGNIFLNEILLANVARSGVDISGINVTHAMGIPALGMLVGLGIAFISYRKKRVYDLGKIEQVEQVAVQYNPRSLLI
AGVAIAAAFIIQLLLDSMIIGALTGFLIFSASGIVKWRETDDLFTEGMKMMAMIGFIMIAASGFAEVMKATGEVQTLVES
SASWINHSKGIGALLMLLVGLLVTMGIGSSFSTVPILAAIFVPLCVQLGFSPIAIVCIVGTAGALGDAGSPASDSTLGPT
SGLNIDGQHHHIWDTVVPTFLHYNLPLLAFGWVAAMVL

Sequences:

>Translated_438_residues
MNAVIAAVGVMLILSLSRVHVVIALIVGALVGGLTGGLGIDATLKAFNSGLGGGATVALSYALLGAFAVAIAKSGLAHAL
ADKALAMVDRQHATGGGSVKWLLIGLLWVVAIASQNILPIHIAFIPLLVPPLLYVLTKLQLDRRLIACVMTFGLITPYMF
LPVGFGNIFLNEILLANVARSGVDISGINVTHAMGIPALGMLVGLGIAFISYRKKRVYDLGKIEQVEQVAVQYNPRSLLI
AGVAIAAAFIIQLLLDSMIIGALTGFLIFSASGIVKWRETDDLFTEGMKMMAMIGFIMIAASGFAEVMKATGEVQTLVES
SASWINHSKGIGALLMLLVGLLVTMGIGSSFSTVPILAAIFVPLCVQLGFSPIAIVCIVGTAGALGDAGSPASDSTLGPT
SGLNIDGQHHHIWDTVVPTFLHYNLPLLAFGWVAAMVL
>Mature_438_residues
MNAVIAAVGVMLILSLSRVHVVIALIVGALVGGLTGGLGIDATLKAFNSGLGGGATVALSYALLGAFAVAIAKSGLAHAL
ADKALAMVDRQHATGGGSVKWLLIGLLWVVAIASQNILPIHIAFIPLLVPPLLYVLTKLQLDRRLIACVMTFGLITPYMF
LPVGFGNIFLNEILLANVARSGVDISGINVTHAMGIPALGMLVGLGIAFISYRKKRVYDLGKIEQVEQVAVQYNPRSLLI
AGVAIAAAFIIQLLLDSMIIGALTGFLIFSASGIVKWRETDDLFTEGMKMMAMIGFIMIAASGFAEVMKATGEVQTLVES
SASWINHSKGIGALLMLLVGLLVTMGIGSSFSTVPILAAIFVPLCVQLGFSPIAIVCIVGTAGALGDAGSPASDSTLGPT
SGLNIDGQHHHIWDTVVPTFLHYNLPLLAFGWVAAMVL

Specific function: Unknown

COG id: COG2056

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991
- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 45617; Mature: 45617

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVIAAVGVMLILSLSRVHVVIALIVGALVGGLTGGLGIDATLKAFNSGLGGGATVALS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHH
YALLGAFAVAIAKSGLAHALADKALAMVDRQHATGGGSVKWLLIGLLWVVAIASQNILPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEH
HIAFIPLLVPPLLYVLTKLQLDRRLIACVMTFGLITPYMFLPVGFGNIFLNEILLANVAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
SGVDISGINVTHAMGIPALGMLVGLGIAFISYRKKRVYDLGKIEQVEQVAVQYNPRSLLI
CCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH
AGVAIAAAFIIQLLLDSMIIGALTGFLIFSASGIVKWRETDDLFTEGMKMMAMIGFIMIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHH
ASGFAEVMKATGEVQTLVESSASWINHSKGIGALLMLLVGLLVTMGIGSSFSTVPILAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FVPLCVQLGFSPIAIVCIVGTAGALGDAGSPASDSTLGPTSGLNIDGQHHHIWDTVVPTF
HHHHHHHHCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LHYNLPLLAFGWVAAMVL
HHCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MNAVIAAVGVMLILSLSRVHVVIALIVGALVGGLTGGLGIDATLKAFNSGLGGGATVALS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHH
YALLGAFAVAIAKSGLAHALADKALAMVDRQHATGGGSVKWLLIGLLWVVAIASQNILPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEH
HIAFIPLLVPPLLYVLTKLQLDRRLIACVMTFGLITPYMFLPVGFGNIFLNEILLANVAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
SGVDISGINVTHAMGIPALGMLVGLGIAFISYRKKRVYDLGKIEQVEQVAVQYNPRSLLI
CCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH
AGVAIAAAFIIQLLLDSMIIGALTGFLIFSASGIVKWRETDDLFTEGMKMMAMIGFIMIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHH
ASGFAEVMKATGEVQTLVESSASWINHSKGIGALLMLLVGLLVTMGIGSSFSTVPILAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FVPLCVQLGFSPIAIVCIVGTAGALGDAGSPASDSTLGPTSGLNIDGQHHHIWDTVVPTF
HHHHHHHHCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LHYNLPLLAFGWVAAMVL
HHCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12620739; 8021208 [H]