| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459987
Identifier: 77459987
GI number: 77459987
Start: 4260829
End: 4261284
Strand: Reverse
Name: 77459987
Synonym: Pfl01_3765
Alternate gene names: NA
Gene position: 4261284-4260829 (Counterclockwise)
Preceding gene: 77459988
Following gene: 77459986
Centisome position: 66.19
GC content: 57.24
Gene sequence:
>456_bases ATGAGTCTGGTTATTTTGTTGGCAGTGGTGGTGTTGGCCGGTGCGGTGTTGAGTGTGCAGGCGGCGATCAATGGGCGTCT TGGGGAAACCGTTGGTGTGTTGCGCAGTAGCCTCCTGACTTTCGTGGTTGGCGCGGTGAGTACAGGGCTGCTGATTCTGT TTTTCGAACCGGCCCATGCGGTCAGCCTGCTGGATGTGCCGAAGTGGCAGTTGAGTGGGGCGCTGTTTGGGGTTGTTTAT ATGATGGTGATGGTGGGGGCGGTGCCTCGGGTGGGGACGGCTGTGGCGACGGTGGCGGTGATTGTCGGGCAGTTGGGGAT GGGGATGTTGATTGATAATTTTGGCTGGTTGGGGAATCCCGCTATTGAGTTGTCTTCGAGTCGGGTTTTGGCGATGGTTT GTTTGGGGCTGGCGTTGGTGTTCATGTATCGCAGTAGCGTGCGTCAGGCCGTTTGA
Upstream 100 bases:
>100_bases CGGGTGGTTTGGGGCCACGCGCAAGAAGGTCAATGCTGAGCGGTGGCTGGCGTTGGGGTTGATTGTGGCGGCTTTGGTTT TGATTGCGCGGGGGTGAGTG
Downstream 100 bases:
>100_bases ACTTGGCGGCCTTTGGGCCGACCAGGCTCTTGTTCGTTTTGCGTGTATATCCGTTTCTTCGGGGGTTGCGGCTGGCGGTT TCGCCCTTACGGCGAGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSLVILLAVVVLAGAVLSVQAAINGRLGETVGVLRSSLLTFVVGAVSTGLLILFFEPAHAVSLLDVPKWQLSGALFGVVY MMVMVGAVPRVGTAVATVAVIVGQLGMGMLIDNFGWLGNPAIELSSSRVLAMVCLGLALVFMYRSSVRQAV
Sequences:
>Translated_151_residues MSLVILLAVVVLAGAVLSVQAAINGRLGETVGVLRSSLLTFVVGAVSTGLLILFFEPAHAVSLLDVPKWQLSGALFGVVY MMVMVGAVPRVGTAVATVAVIVGQLGMGMLIDNFGWLGNPAIELSSSRVLAMVCLGLALVFMYRSSVRQAV >Mature_150_residues SLVILLAVVVLAGAVLSVQAAINGRLGETVGVLRSSLLTFVVGAVSTGLLILFFEPAHAVSLLDVPKWQLSGALFGVVYM MVMVGAVPRVGTAVATVAVIVGQLGMGMLIDNFGWLGNPAIELSSSRVLAMVCLGLALVFMYRSSVRQAV
Specific function: Unknown
COG id: COG3238
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15658; Mature: 15527
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVILLAVVVLAGAVLSVQAAINGRLGETVGVLRSSLLTFVVGAVSTGLLILFFEPAHA CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHH VSLLDVPKWQLSGALFGVVYMMVMVGAVPRVGTAVATVAVIVGQLGMGMLIDNFGWLGNP HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCC AIELSSSRVLAMVCLGLALVFMYRSSVRQAV CEEECCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLVILLAVVVLAGAVLSVQAAINGRLGETVGVLRSSLLTFVVGAVSTGLLILFFEPAHA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHH VSLLDVPKWQLSGALFGVVYMMVMVGAVPRVGTAVATVAVIVGQLGMGMLIDNFGWLGNP HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCC AIELSSSRVLAMVCLGLALVFMYRSSVRQAV CEEECCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA