| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459724
Identifier: 77459724
GI number: 77459724
Start: 3982641
End: 3983312
Strand: Reverse
Name: 77459724
Synonym: Pfl01_3502
Alternate gene names: NA
Gene position: 3983312-3982641 (Counterclockwise)
Preceding gene: 77459731
Following gene: 77459723
Centisome position: 61.87
GC content: 47.02
Gene sequence:
>672_bases ATGGGCGTCACGAAGAACTTCATCACCACCATTCGCAACAGCGAGCAAGCCTTAGAGATTGGCAAAGACATGGGAGAGGT GGCAATTGACGCAATCCTCTCTGATAAGTTTGGTATCGATGGTGTGCTGAAGGATGTACCAATTCTCAACATCATCGTGA GTCTGCATAAGGCTGGGAACAAGATTTCAGCCCACTTCTTCGCCAAGAACATGCTGGCATTCCTCACAGAAATAAACCGA GTCCCCAATGAAAAGCGCATTGAGTTCCTAAACGAAAACTGTGCCAATGAGGAAGGGATTGAGAATGTTGGTGAAGTGAC CCTCATGATCCTAGACAAGCTAGATCACCCTAAGCTTGCTACGATGCTGGGGCGTGCGTTTGCTCTGATGACCTTGGGCG AAATCGATAAGTATGTGTTCGACATCTACGCCCATACGATAAAAGTGATGAATCCTTATCTTCTGCAACAATTGAAGCAG TGCTATCAGATTAAAGGGATGATAGGGGTTGACGCACCAGCGGCCACCATTTTGGCTAACTACGCCTTGTTAAAGGTTGG CTACAAGCTGAACCACAGCGGTAATACAGCCGACATGGATTTGTCCATAGCACCCACTGCGTTTGGTGAGCTTTTCTATA AGCGAATAGTTGTAGGCAGCGACACATACTGA
Upstream 100 bases:
>100_bases AACGGGAGAGCAAGACGGCTATCCAAGCTGCTCAGTGCGTAGTGTCGCTTTGATAGCAGTGAAGCTATACTCACCTCCCA ACCTGCTGAAGGAGAAGCAC
Downstream 100 bases:
>100_bases ATCAGGGGAAGATCATGACCGCAGAACTTGCAACCACAGTGACAAAGGAAGACGTCACCTTCTACTTAAGCATAGCGGCT GCAATGCTGGCTCTTGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MGVTKNFITTIRNSEQALEIGKDMGEVAIDAILSDKFGIDGVLKDVPILNIIVSLHKAGNKISAHFFAKNMLAFLTEINR VPNEKRIEFLNENCANEEGIENVGEVTLMILDKLDHPKLATMLGRAFALMTLGEIDKYVFDIYAHTIKVMNPYLLQQLKQ CYQIKGMIGVDAPAATILANYALLKVGYKLNHSGNTADMDLSIAPTAFGELFYKRIVVGSDTY
Sequences:
>Translated_223_residues MGVTKNFITTIRNSEQALEIGKDMGEVAIDAILSDKFGIDGVLKDVPILNIIVSLHKAGNKISAHFFAKNMLAFLTEINR VPNEKRIEFLNENCANEEGIENVGEVTLMILDKLDHPKLATMLGRAFALMTLGEIDKYVFDIYAHTIKVMNPYLLQQLKQ CYQIKGMIGVDAPAATILANYALLKVGYKLNHSGNTADMDLSIAPTAFGELFYKRIVVGSDTY >Mature_222_residues GVTKNFITTIRNSEQALEIGKDMGEVAIDAILSDKFGIDGVLKDVPILNIIVSLHKAGNKISAHFFAKNMLAFLTEINRV PNEKRIEFLNENCANEEGIENVGEVTLMILDKLDHPKLATMLGRAFALMTLGEIDKYVFDIYAHTIKVMNPYLLQQLKQC YQIKGMIGVDAPAATILANYALLKVGYKLNHSGNTADMDLSIAPTAFGELFYKRIVVGSDTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24688; Mature: 24557
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVTKNFITTIRNSEQALEIGKDMGEVAIDAILSDKFGIDGVLKDVPILNIIVSLHKAGN CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC KISAHFFAKNMLAFLTEINRVPNEKRIEFLNENCANEEGIENVGEVTLMILDKLDHPKLA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHH TMLGRAFALMTLGEIDKYVFDIYAHTIKVMNPYLLQQLKQCYQIKGMIGVDAPAATILAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH YALLKVGYKLNHSGNTADMDLSIAPTAFGELFYKRIVVGSDTY HHHHHHCEEECCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GVTKNFITTIRNSEQALEIGKDMGEVAIDAILSDKFGIDGVLKDVPILNIIVSLHKAGN CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC KISAHFFAKNMLAFLTEINRVPNEKRIEFLNENCANEEGIENVGEVTLMILDKLDHPKLA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHH TMLGRAFALMTLGEIDKYVFDIYAHTIKVMNPYLLQQLKQCYQIKGMIGVDAPAATILAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH YALLKVGYKLNHSGNTADMDLSIAPTAFGELFYKRIVVGSDTY HHHHHHCEEECCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA