| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yebZ [H]
Identifier: 77459669
GI number: 77459669
Start: 3931120
End: 3931977
Strand: Direct
Name: yebZ [H]
Synonym: Pfl01_3447
Alternate gene names: 77459669
Gene position: 3931120-3931977 (Clockwise)
Preceding gene: 77459668
Following gene: 77459672
Centisome position: 61.06
GC content: 63.29
Gene sequence:
>858_bases ATGAGCGAAGCGCTGGTGCTGTGCCGGTTCCTGCATTTCATCGTGGTATTGATGCTGTTCGGGGCCTGGCTGTTCCGGCC GCTGCTGCTCAAGGGTGAAGCGCCGGCGCTGGATCGGCGGCTGGCGCAACTGTCCCGCTGGCTGGTGGCAATTGCCCTGG CCAGCGGCGTCTGTTGGGCGTTGTTGATTACCGCCAGCATGGCCGGTTCGGCGGCGGCCGCGTTTGATCCGGCCACCGTC GAGCTAGTGCTGGGGCACACGTTTTTCGGTCAGGTCTGGCGCTGGCATCTGTTGATCAACGCCTTGTTGCTGGCCTTGCT GTTTACGCCTTGGCATTCAAACCGGCCATTGCGACTGGGCCTGAGCGCGCTGTTGCTGATGACGCTGGCACCGGTCGGAC ACGGCGCGATGCTCGATGGTTTCAGCGGGCAGATGCTGATCCTCAATCAGGCCATTCACCTGACGTGCGTCGGCGCCTGG CTCGGCGGTCTGCCGATGCTGGTGATGATCCTGCGCCAACCTGACAAAAACATTCGCGAAATCCTGCGGCGATTCAGTGG GCTCGGTTACGGGCTGGTCGCCGGCCTGCTGATCACCGGGTTGATCAACGTGCGCGTGCTCACCGGCCAGTGGTGGCCGA CACCGCTGTTCTCGGGATTCGCCCTGATCCTGCTGATCAAGGCGCTGCTGGTGTTCGGCATGCTTGCACTGGCACTGTTC AATCGCCTGCGGATCAACGATTGCGAACAGCGGATCGACACCCTCAAGCGCAGCGTCATGCTCGAATGGCTGCTGGGGAT CGGCGCCGTGGCGGCGGTGTCCGTGCTAGGCACCCTGCCGCCAATGATCGCTGCCTGA
Upstream 100 bases:
>100_bases ACCGCTGACCGCTGGCGAGTACAAGGTCGAATGGCACGCGGTGTCGGTCGACACGCACAAGAGCGAAGGCGCCTATCAGT TCAAGGTTGGCCAGTAATTC
Downstream 100 bases:
>100_bases GGTCAGTGTTTCTGGGTGTCGCCCGCCGCCGTATCAATGCTGACCACCACCGACATCCCCGGCCGCAAACGCTCGCTCTC CTGCTGATCCGGATCGATGG
Product: copper resistance D
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSEALVLCRFLHFIVVLMLFGAWLFRPLLLKGEAPALDRRLAQLSRWLVAIALASGVCWALLITASMAGSAAAAFDPATV ELVLGHTFFGQVWRWHLLINALLLALLFTPWHSNRPLRLGLSALLLMTLAPVGHGAMLDGFSGQMLILNQAIHLTCVGAW LGGLPMLVMILRQPDKNIREILRRFSGLGYGLVAGLLITGLINVRVLTGQWWPTPLFSGFALILLIKALLVFGMLALALF NRLRINDCEQRIDTLKRSVMLEWLLGIGAVAAVSVLGTLPPMIAA
Sequences:
>Translated_285_residues MSEALVLCRFLHFIVVLMLFGAWLFRPLLLKGEAPALDRRLAQLSRWLVAIALASGVCWALLITASMAGSAAAAFDPATV ELVLGHTFFGQVWRWHLLINALLLALLFTPWHSNRPLRLGLSALLLMTLAPVGHGAMLDGFSGQMLILNQAIHLTCVGAW LGGLPMLVMILRQPDKNIREILRRFSGLGYGLVAGLLITGLINVRVLTGQWWPTPLFSGFALILLIKALLVFGMLALALF NRLRINDCEQRIDTLKRSVMLEWLLGIGAVAAVSVLGTLPPMIAA >Mature_284_residues SEALVLCRFLHFIVVLMLFGAWLFRPLLLKGEAPALDRRLAQLSRWLVAIALASGVCWALLITASMAGSAAAAFDPATVE LVLGHTFFGQVWRWHLLINALLLALLFTPWHSNRPLRLGLSALLLMTLAPVGHGAMLDGFSGQMLILNQAIHLTCVGAWL GGLPMLVMILRQPDKNIREILRRFSGLGYGLVAGLLITGLINVRVLTGQWWPTPLFSGFALILLIKALLVFGMLALALFN RLRINDCEQRIDTLKRSVMLEWLLGIGAVAAVSVLGTLPPMIAA
Specific function: Unknown
COG id: COG1276
COG function: function code P; Putative copper export protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CopD family [H]
Homologues:
Organism=Escherichia coli, GI1788145, Length=288, Percent_Identity=30.9027777777778, Blast_Score=87, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008457 [H]
Pfam domain/function: PF05425 CopD [H]
EC number: NA
Molecular weight: Translated: 31142; Mature: 31011
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEALVLCRFLHFIVVLMLFGAWLFRPLLLKGEAPALDRRLAQLSRWLVAIALASGVCWA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLITASMAGSAAAAFDPATVELVLGHTFFGQVWRWHLLINALLLALLFTPWHSNRPLRLG HHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH LSALLLMTLAPVGHGAMLDGFSGQMLILNQAIHLTCVGAWLGGLPMLVMILRQPDKNIRE HHHHHHHHHHCCCCCCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ILRRFSGLGYGLVAGLLITGLINVRVLTGQWWPTPLFSGFALILLIKALLVFGMLALALF HHHHHCCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NRLRINDCEQRIDTLKRSVMLEWLLGIGAVAAVSVLGTLPPMIAA HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC >Mature Secondary Structure SEALVLCRFLHFIVVLMLFGAWLFRPLLLKGEAPALDRRLAQLSRWLVAIALASGVCWA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLITASMAGSAAAAFDPATVELVLGHTFFGQVWRWHLLINALLLALLFTPWHSNRPLRLG HHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH LSALLLMTLAPVGHGAMLDGFSGQMLILNQAIHLTCVGAWLGGLPMLVMILRQPDKNIRE HHHHHHHHHHCCCCCCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ILRRFSGLGYGLVAGLLITGLINVRVLTGQWWPTPLFSGFALILLIKALLVFGMLALALF HHHHHCCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NRLRINDCEQRIDTLKRSVMLEWLLGIGAVAAVSVLGTLPPMIAA HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]