| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459660
Identifier: 77459660
GI number: 77459660
Start: 3920494
End: 3921432
Strand: Reverse
Name: 77459660
Synonym: Pfl01_3438
Alternate gene names: NA
Gene position: 3921432-3920494 (Counterclockwise)
Preceding gene: 77459661
Following gene: 77459659
Centisome position: 60.91
GC content: 59.0
Gene sequence:
>939_bases ATGTCGCCCATCAAAGTCATCACCTCAGGCTCGGCGTATCTGGACATCGACGCCTACGCCTGCTGCATCGCCTACGCCGA ACTGCTCAACCTGCAGGGCATTTCGGCCCGCGCCGTCAGCAGCGCAAAACCCAATGCCAGCGTTTCGACAACCGTGCTCG GCTGGGGCGCTGTTTTGCACGACTACCGCCCGACATCCAGCGATGAGTTTGTGCTGGTCGACGTATCCGATTACCACTAT TTCGACCCAATGGTCGCGCTCGATCGGGTGGTGGAAGTCATCGACCATCATCCGGGCTTCGAACAGCATTGGGCACAGAC ACTCGGATCTGCCGCCGACATCCGCCCGATCGGCGCGGCGGCGACGCAGGTTTTCCAGCGCTGGAAAGCCGCAGGATGGC TGTCGAGGATCAGCGAACAAAGCGCCGCGCTGCTGGCCACGGCGATTCTGGACAACACGCTGAATTTCACCGGGCAGATG ACCACGACAGCGGACATCGACGCCTATGCCGAGCTCGCACCCCACGGGAAACTCACAGCGGACTGGCCCGGGCAATACTT CCTCGAATGTCAGACCGCTATCGAATCTGACATCTGCGCAGCACTGGCAGCAGACTTGAAAAGGATGAAACCCGACAGCC TCCTGCCGCAGGTCTTCGCTCAAATGACGGTCTGGGACGCCGATGCCTTGCTCGAAAGGCATCGCTCGACGATCAACGAC TGGATGGCCGGGCAGGGCGATGACTGGCTGCTGAACCTCATCAGCATCCGCGACCAAAAAAGCTGTCTGCTGGCCAAACC CTTGGTCTCCCAGCAGAAGCTGAGCCATTTGTTATCACTTGAATGGCACGCTGGAATGGCCGTTATAGAGCCATCAATGC TGCGCAAGGAACTGCTGAAGCTTTCTTTACAGACCCCACGTCACAAACCCGAAAGCTGA
Upstream 100 bases:
>100_bases TGCGGCGGTGGCCGGGGGACAACGCGCTGCCTGACGTTCATTAATCGTTCATGAAAATGTGCGACGTTGCCGCCCCTGAA AAGGAAGTCAGGGACGCGTA
Downstream 100 bases:
>100_bases ATCGTCATCCCGTTGAATCCCTCAAACACGGAGCAACGCGATGTCGTCCAATACCCAAGCCGTCAACCTGCAACAGGCCA TGCCGCAAGTGTTCGAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSPIKVITSGSAYLDIDAYACCIAYAELLNLQGISARAVSSAKPNASVSTTVLGWGAVLHDYRPTSSDEFVLVDVSDYHY FDPMVALDRVVEVIDHHPGFEQHWAQTLGSAADIRPIGAAATQVFQRWKAAGWLSRISEQSAALLATAILDNTLNFTGQM TTTADIDAYAELAPHGKLTADWPGQYFLECQTAIESDICAALAADLKRMKPDSLLPQVFAQMTVWDADALLERHRSTIND WMAGQGDDWLLNLISIRDQKSCLLAKPLVSQQKLSHLLSLEWHAGMAVIEPSMLRKELLKLSLQTPRHKPES
Sequences:
>Translated_312_residues MSPIKVITSGSAYLDIDAYACCIAYAELLNLQGISARAVSSAKPNASVSTTVLGWGAVLHDYRPTSSDEFVLVDVSDYHY FDPMVALDRVVEVIDHHPGFEQHWAQTLGSAADIRPIGAAATQVFQRWKAAGWLSRISEQSAALLATAILDNTLNFTGQM TTTADIDAYAELAPHGKLTADWPGQYFLECQTAIESDICAALAADLKRMKPDSLLPQVFAQMTVWDADALLERHRSTIND WMAGQGDDWLLNLISIRDQKSCLLAKPLVSQQKLSHLLSLEWHAGMAVIEPSMLRKELLKLSLQTPRHKPES >Mature_311_residues SPIKVITSGSAYLDIDAYACCIAYAELLNLQGISARAVSSAKPNASVSTTVLGWGAVLHDYRPTSSDEFVLVDVSDYHYF DPMVALDRVVEVIDHHPGFEQHWAQTLGSAADIRPIGAAATQVFQRWKAAGWLSRISEQSAALLATAILDNTLNFTGQMT TTADIDAYAELAPHGKLTADWPGQYFLECQTAIESDICAALAADLKRMKPDSLLPQVFAQMTVWDADALLERHRSTINDW MAGQGDDWLLNLISIRDQKSCLLAKPLVSQQKLSHLLSLEWHAGMAVIEPSMLRKELLKLSLQTPRHKPES
Specific function: Unknown
COG id: COG1227
COG function: function code C; Inorganic pyrophosphatase/exopolyphosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34332; Mature: 34201
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPIKVITSGSAYLDIDAYACCIAYAELLNLQGISARAVSSAKPNASVSTTVLGWGAVLH CCCCEEEECCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEEHHHHHHHHHH DYRPTSSDEFVLVDVSDYHYFDPMVALDRVVEVIDHHPGFEQHWAQTLGSAADIRPIGAA CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHH ATQVFQRWKAAGWLSRISEQSAALLATAILDNTLNFTGQMTTTADIDAYAELAPHGKLTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCEEC DWPGQYFLECQTAIESDICAALAADLKRMKPDSLLPQVFAQMTVWDADALLERHRSTIND CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH WMAGQGDDWLLNLISIRDQKSCLLAKPLVSQQKLSHLLSLEWHAGMAVIEPSMLRKELLK HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHH LSLQTPRHKPES HHHCCCCCCCCC >Mature Secondary Structure SPIKVITSGSAYLDIDAYACCIAYAELLNLQGISARAVSSAKPNASVSTTVLGWGAVLH CCCEEEECCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEEHHHHHHHHHH DYRPTSSDEFVLVDVSDYHYFDPMVALDRVVEVIDHHPGFEQHWAQTLGSAADIRPIGAA CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHH ATQVFQRWKAAGWLSRISEQSAALLATAILDNTLNFTGQMTTTADIDAYAELAPHGKLTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCEEC DWPGQYFLECQTAIESDICAALAADLKRMKPDSLLPQVFAQMTVWDADALLERHRSTIND CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH WMAGQGDDWLLNLISIRDQKSCLLAKPLVSQQKLSHLLSLEWHAGMAVIEPSMLRKELLK HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHH LSLQTPRHKPES HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA