| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is cynS [H]
Identifier: 77459591
GI number: 77459591
Start: 3845180
End: 3845644
Strand: Direct
Name: cynS [H]
Synonym: Pfl01_3369
Alternate gene names: 77459591
Gene position: 3845180-3845644 (Clockwise)
Preceding gene: 77459589
Following gene: 77459592
Centisome position: 59.72
GC content: 64.52
Gene sequence:
>465_bases ATGCAATCCCAAGCCTACAACGACAGCCGCATCGCCCTGACCACCCGCGCCCTGGATGCCAAGGCACAGAAAAACCTGTC GTGGCAGGATCTGGCCGACGGCACCGGCCTGAGCCTGGCCTACGTCACCGCCGCCCTCCTCGGCCAGCACCCGCTGCCAA AAGCCGCGGCCGAAGTGGTCGGCGACAAGCTTGAGCTGAGCGCCGAAGACGTCGCCGCCCTGCAAATCATCCCGCTGCGC GGCAGCCTCGACGGTGTGCCGACCGACCCGACCATCTACCGCTTCCACGAGATGATCCAGATCTACGGCACCACCCTGAA GGCGCTGGTTCACGAGCAGTTCGGCGACGGCATCATCAGCGCGATCAACTTCAAGCTCGACATCAAGAAAGTCGAAGACC CTGAAGGCGGTTCCCGCGCCGTGGTCACCCTCGACGGCAAGTTCCTGCCGCTGCGTCCGTTCTGA
Upstream 100 bases:
>100_bases AGTGCTTATGCTTTGCATTGTATATCGGACTTGGACGCTATGGATCAATCGGCAGAAGATGAATCCCACACAGCAAGCCA ACCCCGAAAGGAGAAGCACC
Downstream 100 bases:
>100_bases TCCCTCCGGGCCCGTACACCGCGTGCGGGCCCATCCAAACCTGAATTGCCCTGTCGTCACCACACCTGTCTGGAGGCTGC CCCATGCAAAAAATTCTGTT
Product: cyanate hydratase
Products: NA
Alternate protein names: Cyanase; Cyanate hydrolase; Cyanate lyase [H]
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MQSQAYNDSRIALTTRALDAKAQKNLSWQDLADGTGLSLAYVTAALLGQHPLPKAAAEVVGDKLELSAEDVAALQIIPLR GSLDGVPTDPTIYRFHEMIQIYGTTLKALVHEQFGDGIISAINFKLDIKKVEDPEGGSRAVVTLDGKFLPLRPF
Sequences:
>Translated_154_residues MQSQAYNDSRIALTTRALDAKAQKNLSWQDLADGTGLSLAYVTAALLGQHPLPKAAAEVVGDKLELSAEDVAALQIIPLR GSLDGVPTDPTIYRFHEMIQIYGTTLKALVHEQFGDGIISAINFKLDIKKVEDPEGGSRAVVTLDGKFLPLRPF >Mature_154_residues MQSQAYNDSRIALTTRALDAKAQKNLSWQDLADGTGLSLAYVTAALLGQHPLPKAAAEVVGDKLELSAEDVAALQIIPLR GSLDGVPTDPTIYRFHEMIQIYGTTLKALVHEQFGDGIISAINFKLDIKKVEDPEGGSRAVVTLDGKFLPLRPF
Specific function: Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide [H]
COG id: COG1513
COG function: function code P; Cyanate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyanase family [H]
Homologues:
Organism=Escherichia coli, GI1786535, Length=155, Percent_Identity=63.8709677419355, Blast_Score=204, Evalue=2e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008076 - InterPro: IPR003712 - InterPro: IPR010982 [H]
Pfam domain/function: PF02560 Cyanate_lyase [H]
EC number: =4.2.1.104 [H]
Molecular weight: Translated: 16644; Mature: 16644
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSQAYNDSRIALTTRALDAKAQKNLSWQDLADGTGLSLAYVTAALLGQHPLPKAAAEVV CCCCCCCCCEEEEEEEHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHC GDKLELSAEDVAALQIIPLRGSLDGVPTDPTIYRFHEMIQIYGTTLKALVHEQFGDGIIS CCCEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE AINFKLDIKKVEDPEGGSRAVVTLDGKFLPLRPF EEEEEEEEEECCCCCCCCEEEEEECCCEEECCCC >Mature Secondary Structure MQSQAYNDSRIALTTRALDAKAQKNLSWQDLADGTGLSLAYVTAALLGQHPLPKAAAEVV CCCCCCCCCEEEEEEEHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHC GDKLELSAEDVAALQIIPLRGSLDGVPTDPTIYRFHEMIQIYGTTLKALVHEQFGDGIIS CCCEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE AINFKLDIKKVEDPEGGSRAVVTLDGKFLPLRPF EEEEEEEEEECCCCCCCCEEEEEECCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA