| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yibF [C]
Identifier: 77459551
GI number: 77459551
Start: 3807354
End: 3807959
Strand: Direct
Name: yibF [C]
Synonym: Pfl01_3329
Alternate gene names: 77459551
Gene position: 3807354-3807959 (Clockwise)
Preceding gene: 77459546
Following gene: 77459552
Centisome position: 59.14
GC content: 62.21
Gene sequence:
>606_bases ATGAAACTGATCGGAATGCTCGACTCACCCTATGTCCGCCGCGTGGCGATCTCCGCCAAGTGCCTGGGTATTGAACTGGA ACACGACCCAGTGTCGGTGTTTCGCCACTTCGAACGCTTCCAGCAGATCAACCCGGTGGTCAAGGCGCCGACCCTGGTGC TCGATGACGGCGAAGTGCTGATCGACTCGACCCTGATCCTCGACTATCTCGAAGCCCTGTCCGGCAAAACCCTGCTCCCA ACCGACCTGCCGCAACGGGTCAAAGCCCTGCGCCTGATCGGCCTCGGCCTCGCCGCCTGCGAAAAAGCCGTGCAGCTCTA CTACGAACGCAACCTGCGCCCGGCCGACATTCAATATCAGCCGTGGGTCGAACGCGTCGAAGGCCAACTCGCCGCCGCCT TCACCGCCCTTGAACATGAACTCGAAAAACACCCGCTGCCCACCGACGGCCCTCTCCAGCAGGACGGCATCACTCTCGCC GTCGCCTGGAGCTTCACCGGCCTCGTCGTCCCCGACCAGATCGACGCTCAACGTTTCCCGCGCATCGCCCAATACACCGA GTACGCCGAAAGCACCCAGGCGTTCATCAACACCCCGATGACCTGA
Upstream 100 bases:
>100_bases CAACGACCGTCGACCCGTTGTCACGAGCTAGTCAGCCCACAGACTTTGCCGCTACATTCGTCACCCACATCACCAGATCG TCGCCTCCAGGGAAGTGCAC
Downstream 100 bases:
>100_bases CCATGAGCGCCACCGAAACCGCCGCCCCAGCTCTGAAAGAAATCTTCAACGCCGAACGCCTGCAACACATCGCCACTGAA ATGAGCGCCGTGTACCCGGC
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase-Like; Glutathione Transferase; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Glutathione S-Transferase Related Protein; Glutathione S-Transferase N- Domain; Glutathione S-Transferase With Thioredoxin-Like Domain; Glutathione S-Transferase Like Protein; S-Transferase; Glutathione S-Transferase N-Terminal Domain Protein
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKLIGMLDSPYVRRVAISAKCLGIELEHDPVSVFRHFERFQQINPVVKAPTLVLDDGEVLIDSTLILDYLEALSGKTLLP TDLPQRVKALRLIGLGLAACEKAVQLYYERNLRPADIQYQPWVERVEGQLAAAFTALEHELEKHPLPTDGPLQQDGITLA VAWSFTGLVVPDQIDAQRFPRIAQYTEYAESTQAFINTPMT
Sequences:
>Translated_201_residues MKLIGMLDSPYVRRVAISAKCLGIELEHDPVSVFRHFERFQQINPVVKAPTLVLDDGEVLIDSTLILDYLEALSGKTLLP TDLPQRVKALRLIGLGLAACEKAVQLYYERNLRPADIQYQPWVERVEGQLAAAFTALEHELEKHPLPTDGPLQQDGITLA VAWSFTGLVVPDQIDAQRFPRIAQYTEYAESTQAFINTPMT >Mature_201_residues MKLIGMLDSPYVRRVAISAKCLGIELEHDPVSVFRHFERFQQINPVVKAPTLVLDDGEVLIDSTLILDYLEALSGKTLLP TDLPQRVKALRLIGLGLAACEKAVQLYYERNLRPADIQYQPWVERVEGQLAAAFTALEHELEKHPLPTDGPLQQDGITLA VAWSFTGLVVPDQIDAQRFPRIAQYTEYAESTQAFINTPMT
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22527; Mature: 22527
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIGMLDSPYVRRVAISAKCLGIELEHDPVSVFRHFERFQQINPVVKAPTLVLDDGEVL CCEECCCCCCHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHCCCHHCCCEEEEECCCEE IDSTLILDYLEALSGKTLLPTDLPQRVKALRLIGLGLAACEKAVQLYYERNLRPADIQYQ EHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PWVERVEGQLAAAFTALEHELEKHPLPTDGPLQQDGITLAVAWSFTGLVVPDQIDAQRFP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEECCCCCCHHHCH RIAQYTEYAESTQAFINTPMT HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKLIGMLDSPYVRRVAISAKCLGIELEHDPVSVFRHFERFQQINPVVKAPTLVLDDGEVL CCEECCCCCCHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHCCCHHCCCEEEEECCCEE IDSTLILDYLEALSGKTLLPTDLPQRVKALRLIGLGLAACEKAVQLYYERNLRPADIQYQ EHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PWVERVEGQLAAAFTALEHELEKHPLPTDGPLQQDGITLAVAWSFTGLVVPDQIDAQRFP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEECCCCCCHHHCH RIAQYTEYAESTQAFINTPMT HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA