| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is nudG [C]
Identifier: 77459512
GI number: 77459512
Start: 3774748
End: 3775110
Strand: Direct
Name: nudG [C]
Synonym: Pfl01_3290
Alternate gene names: 77459512
Gene position: 3774748-3775110 (Clockwise)
Preceding gene: 77459511
Following gene: 77459516
Centisome position: 58.63
GC content: 60.61
Gene sequence:
>363_bases ATGAAAGTACGAGCAACGGTCATCTGCGAGCAGGACCGACACATTCTTCTGGTGCGCAAACCCAGGTGCCGCTGGACGCT GCCGGGCGGCACCGTCGAGCCGGGAGAAACCCGCGCGCAAGCCGCCGCCCGCGAACTCAAGGAAGAGACCGGACTGGACA GCGATGAGATGCTCTATCTGATGGAGTTGCAGAACGGCAGCACCCGGCACCACGTCTACGAGGCGTCGGTGCTGAACATC GATCAGGTTCGCCCGCTGAATGAAATTGTCGACTGTCTCTGGCACCCGCTCGATGCGGTGCAGAATCTGAACGTCAGTAA CGCTACGCTGAACATCGTCCGCGCCTTCCAGCGACGTCTTTGA
Upstream 100 bases:
>100_bases CACTTTTGCCGCTGCCAGGCACTCAGAAGCTCTAGACCGGCAGCGGCCCAAATATTGCTAATTCATGACAGATTTATGAC AACCGACATTCGGGTAACAC
Downstream 100 bases:
>100_bases CCGTCAGCCGGCGAAAGCCCGGCGTCCGGCGCTCATTTCGGTGCGCAATTCACCGATGAAATTGGAAATGTCACGAATGG TGACCAGATGCTCCGGGGAA
Product: NUDIX hydrolase
Products: CMP; diphosphate [C]
Alternate protein names: MutT/Nudix Family Protein; NUDIX Family Hydrolase; NTP Pyrophosphohydrolase; Hydrolaso; MutT/NUDIX Family Hydrolase
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MKVRATVICEQDRHILLVRKPRCRWTLPGGTVEPGETRAQAAARELKEETGLDSDEMLYLMELQNGSTRHHVYEASVLNI DQVRPLNEIVDCLWHPLDAVQNLNVSNATLNIVRAFQRRL
Sequences:
>Translated_120_residues MKVRATVICEQDRHILLVRKPRCRWTLPGGTVEPGETRAQAAARELKEETGLDSDEMLYLMELQNGSTRHHVYEASVLNI DQVRPLNEIVDCLWHPLDAVQNLNVSNATLNIVRAFQRRL >Mature_120_residues MKVRATVICEQDRHILLVRKPRCRWTLPGGTVEPGETRAQAAARELKEETGLDSDEMLYLMELQNGSTRHHVYEASVLNI DQVRPLNEIVDCLWHPLDAVQNLNVSNATLNIVRAFQRRL
Specific function: Specific For Pyrimidine Substrates. Acts On 5-Methyl- Dctp, Ctp And Dctp In Decreasing Order. [C]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.- [C]
Molecular weight: Translated: 13744; Mature: 13744
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRATVICEQDRHILLVRKPRCRWTLPGGTVEPGETRAQAAARELKEETGLDSDEMLYL CCEEEEEEECCCCEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEE MELQNGSTRHHVYEASVLNIDQVRPLNEIVDCLWHPLDAVQNLNVSNATLNIVRAFQRRL EEECCCCCCEEEEEEEECCCHHCCCHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKVRATVICEQDRHILLVRKPRCRWTLPGGTVEPGETRAQAAARELKEETGLDSDEMLYL CCEEEEEEECCCCEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEE MELQNGSTRHHVYEASVLNIDQVRPLNEIVDCLWHPLDAVQNLNVSNATLNIVRAFQRRL EEECCCCCCEEEEEEEECCCHHCCCHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CTP; H2O [C]
Specific reaction: CTP + H2O = CMP + diphosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA