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The map label for this gene is ykgB [H]

Identifier: 77459444

GI number: 77459444

Start: 3702143

End: 3703318

Strand: Reverse

Name: ykgB [H]

Synonym: Pfl01_3222

Alternate gene names: 77459444

Gene position: 3703318-3702143 (Counterclockwise)

Preceding gene: 77459445

Following gene: 77459443

Centisome position: 57.52

GC content: 61.99

Gene sequence:

>1176_bases
ATGAACATGCGTAAATTCTGGCCATTGCTGATGGCCGGCAGCGTCGGCGCGATGGGACTTTCAAGTGCCTCGGCCGAGAG
CTTCCAGTTTTTGGTGGGCTCCTACACCGCCGGCACCAGCGAAGGCATCTACCGGATGAACTTCGACAGCGCCACCGGAC
AGATCGACGCCAAACCGCTGCAAGTGATCAAGAGCGAAAACCCGTCGTGGCTGACCCTGTCGAAGGATCAGCGCCGGTTG
TTCGTGGTCAACGAAAACGGCCCAGGCCAGAAAGATCCGGTCGGTCGTGTGAGCAGCTACGCCATCGATCCGAAGACTCA
CGCGCTGACCCTGATCAATCAGGTCCAGAGCCTGGGCAACGAGCCGACCCATTCCAGCCTCAGCGGCGACGCCAGCCATC
TGTTCGTCAGCAACTACTCGGTGGTTGAAGACCCGGGCGGCACCCTCGCGGTATTGCCGGTGGGCAGCGACGGCAAGCTC
AAACCGGTGGTGCAGATGAGCGCGCACCCGGCGAGCCGGGTCAATCCCGAGCGTCAGGCCTCGAACCACGTGCACTCGAC
GGTGTCCTCGCCGGACGGCCGTTACGTGTTCTCCAATGACCTGGGTGCGGACAAGGTCTTCATCTACCAATTCGACCCGA
AAGCCAAACCGGATCTGCCGCTGACCCCGGCGAAGACCGCGTCGGTGCAACTGCCAGCCGGCAGCGGCCCGCGTCATCTG
TTGTTCAGCGCGGACGGCAAACATGCCTGGCTGACCATGGAAATGAGTGCTCAGGTCGCGGTGTTCGACTACAAGGACGG
CGTGCTGACCCAGACGCAACTGGTCGATCTGGCGGCCGGCCAGCCAACCGCGGACAAAGCCGCCGCCGCGCTGCACGCGT
CCGCCGATGGCAAATTCCTCTACGTCAGCAACCGCGGTACCGCCAATCAGCTGCTGGTGTTCGCCATCGACCCGGCCAGT
GGCCAGCTCAAGGAATTGCAACGACGTTCGGTGGAAGGCGATCACCCGCGCGAGTTCAGCCTCGATCCAAGCGGCAAATT
CCTGCTGATCGCCAATCAGAAGAGCAACCAGATTGTCGTGGTCGAGCGCGACGGCAAGACCGGTCTGCTGGGCAAAACCG
TGCAAAAACTGCCGATGGACGCCCCGAGCGATCTCAAGTTTCTCGTGCGTCAATAA

Upstream 100 bases:

>100_bases
TGATCGTCGGTTTTTCCAGCGACACCAAGACCGTTGGCGAACACCGTCTGGTCTGCCTCGGGGATGTACTGAGCAGCGCC
GACGACGAGGATGAAGCCGA

Downstream 100 bases:

>100_bases
GCCGCAGGCCCCGGTCTACGGGGCCTGAAGCTTTGTATTAATCCTGCTGATAACAGGTAATGTTGCAAAGCATTTCAAGC
GATCAACCCTCGAGCGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MNMRKFWPLLMAGSVGAMGLSSASAESFQFLVGSYTAGTSEGIYRMNFDSATGQIDAKPLQVIKSENPSWLTLSKDQRRL
FVVNENGPGQKDPVGRVSSYAIDPKTHALTLINQVQSLGNEPTHSSLSGDASHLFVSNYSVVEDPGGTLAVLPVGSDGKL
KPVVQMSAHPASRVNPERQASNHVHSTVSSPDGRYVFSNDLGADKVFIYQFDPKAKPDLPLTPAKTASVQLPAGSGPRHL
LFSADGKHAWLTMEMSAQVAVFDYKDGVLTQTQLVDLAAGQPTADKAAAALHASADGKFLYVSNRGTANQLLVFAIDPAS
GQLKELQRRSVEGDHPREFSLDPSGKFLLIANQKSNQIVVVERDGKTGLLGKTVQKLPMDAPSDLKFLVRQ

Sequences:

>Translated_391_residues
MNMRKFWPLLMAGSVGAMGLSSASAESFQFLVGSYTAGTSEGIYRMNFDSATGQIDAKPLQVIKSENPSWLTLSKDQRRL
FVVNENGPGQKDPVGRVSSYAIDPKTHALTLINQVQSLGNEPTHSSLSGDASHLFVSNYSVVEDPGGTLAVLPVGSDGKL
KPVVQMSAHPASRVNPERQASNHVHSTVSSPDGRYVFSNDLGADKVFIYQFDPKAKPDLPLTPAKTASVQLPAGSGPRHL
LFSADGKHAWLTMEMSAQVAVFDYKDGVLTQTQLVDLAAGQPTADKAAAALHASADGKFLYVSNRGTANQLLVFAIDPAS
GQLKELQRRSVEGDHPREFSLDPSGKFLLIANQKSNQIVVVERDGKTGLLGKTVQKLPMDAPSDLKFLVRQ
>Mature_391_residues
MNMRKFWPLLMAGSVGAMGLSSASAESFQFLVGSYTAGTSEGIYRMNFDSATGQIDAKPLQVIKSENPSWLTLSKDQRRL
FVVNENGPGQKDPVGRVSSYAIDPKTHALTLINQVQSLGNEPTHSSLSGDASHLFVSNYSVVEDPGGTLAVLPVGSDGKL
KPVVQMSAHPASRVNPERQASNHVHSTVSSPDGRYVFSNDLGADKVFIYQFDPKAKPDLPLTPAKTASVQLPAGSGPRHL
LFSADGKHAWLTMEMSAQVAVFDYKDGVLTQTQLVDLAAGQPTADKAAAALHASADGKFLYVSNRGTANQLLVFAIDPAS
GQLKELQRRSVEGDHPREFSLDPSGKFLLIANQKSNQIVVVERDGKTGLLGKTVQKLPMDAPSDLKFLVRQ

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=302, Percent_Identity=29.4701986754967, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 41983; Mature: 41983

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMRKFWPLLMAGSVGAMGLSSASAESFQFLVGSYTAGTSEGIYRMNFDSATGQIDAKPL
CCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCEECCCHH
QVIKSENPSWLTLSKDQRRLFVVNENGPGQKDPVGRVSSYAIDPKTHALTLINQVQSLGN
HHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCC
EPTHSSLSGDASHLFVSNYSVVEDPGGTLAVLPVGSDGKLKPVVQMSAHPASRVNPERQA
CCCCCCCCCCCCEEEEECCEEEECCCCEEEEEEECCCCCCCEEEEECCCCHHHCCCHHHH
SNHVHSTVSSPDGRYVFSNDLGADKVFIYQFDPKAKPDLPLTPAKTASVQLPAGSGPRHL
HHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEE
LFSADGKHAWLTMEMSAQVAVFDYKDGVLTQTQLVDLAAGQPTADKAAAALHASADGKFL
EEECCCCEEEEEEEECCEEEEEECCCCCEEHEEEEEECCCCCCHHHHHHEEEECCCCCEE
YVSNRGTANQLLVFAIDPASGQLKELQRRSVEGDHPREFSLDPSGKFLLIANQKSNQIVV
EEECCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCEECCCCCCCEEEEECCCCCEEEE
VERDGKTGLLGKTVQKLPMDAPSDLKFLVRQ
EEECCCCCCHHHHHHHCCCCCCCCHHHHHCC
>Mature Secondary Structure
MNMRKFWPLLMAGSVGAMGLSSASAESFQFLVGSYTAGTSEGIYRMNFDSATGQIDAKPL
CCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCEECCCHH
QVIKSENPSWLTLSKDQRRLFVVNENGPGQKDPVGRVSSYAIDPKTHALTLINQVQSLGN
HHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCC
EPTHSSLSGDASHLFVSNYSVVEDPGGTLAVLPVGSDGKLKPVVQMSAHPASRVNPERQA
CCCCCCCCCCCCEEEEECCEEEECCCCEEEEEEECCCCCCCEEEEECCCCHHHCCCHHHH
SNHVHSTVSSPDGRYVFSNDLGADKVFIYQFDPKAKPDLPLTPAKTASVQLPAGSGPRHL
HHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEE
LFSADGKHAWLTMEMSAQVAVFDYKDGVLTQTQLVDLAAGQPTADKAAAALHASADGKFL
EEECCCCEEEEEEEECCEEEEEECCCCCEEHEEEEEECCCCCCHHHHHHEEEECCCCCEE
YVSNRGTANQLLVFAIDPASGQLKELQRRSVEGDHPREFSLDPSGKFLLIANQKSNQIVV
EEECCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCEECCCCCCCEEEEECCCCCEEEE
VERDGKTGLLGKTVQKLPMDAPSDLKFLVRQ
EEECCCCCCHHHHHHHCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]