| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fecA [C]
Identifier: 77459421
GI number: 77459421
Start: 3675630
End: 3676349
Strand: Reverse
Name: fecA [C]
Synonym: Pfl01_3199
Alternate gene names: 77459421
Gene position: 3676349-3675630 (Counterclockwise)
Preceding gene: 77459423
Following gene: 77459420
Centisome position: 57.1
GC content: 66.25
Gene sequence:
>720_bases GTGCAGCGAGGCCGTGCCAGGGAGGATGTTGTGCGCTCAGCGCTCATGCGCCAGCTCTGTCTGGGGCTGCTGCTTGGCTT GTTTCTGAGCCGCGCCAGCGCCGACCCGGTGCCGGCGACGATGCGCATGACCTTGCACATCCCGGCCCAGGAACTGGCCC GCGCCCTCGAACAGTTCAGCCGCGCCACCGGCATGGCGGTGCTGGTCGACAGCCAGTTGAGTCGCGGTCGACGCTCATTG GCGGTGGAAGGTGAATTCACCGCCGCCGAAGCGTTGCGGCGGATGCTCGGCGGCAGCGGCTTGATGGCCAAGTACAGCCG CGACGACGCGTTCACCTTGCAAGTGGCGCAGGTCGAGGACGTGCCAATGCCGGCGGAGAAACCGACCCCCGCCAGCGCAG CCGTCAACCGCAGTTACGCCACGGCGGTGCAGGCCGCGATTGAACGCAACCTGTGCCGCTCGCCGCTGACCCGGCCCGGC AGTTTTCGCGCGGTGTTGCAGCTGTGGATCGGCCGCGACGGCGTGGTGCAGCACAACCGGTTGGTCACCTCGACCGGCGA TGTTCGGCGCGATGCAGCGCTGGTAGACAGCTTTCACACGCTCAAAATCGACCGGCCGACACCCGGCGCATTGCGCCAGC CAGTCACGTTGCTGTTGTTACCCGAATCGTCAGGAAAGCGCATGGAATGCACACAATGGGAAGGAGTTTCCGGGGGATGA
Upstream 100 bases:
>100_bases GCAACGGCGGCGCCGATCCCGTGATGGTTTTTTTGCAGTGGCCGTCACACCAGATTCATAAACAGCCCTCAGGATGACGG TTTTCAGGGATACATCAGCC
Downstream 100 bases:
>100_bases AAGACGCCGGACAAAGTTCGATGGTCCAGCTGTTCCTGACGTCCTACGAGGACTTTCGGGTGCGCCTGCGACGCCGTCTC GGCTCGGAGGACCTGGCCAA
Product: secretin/TonB, short-like
Products: NA
Alternate protein names: Secretin/nB Short N-Terminal Domain-Containing Protein; NB-Ferrisiderophore Receptor Protein; Secretin/nB-Like Protein; Secretin/nB Short-Like; NB Family Protein; NB-Dependent Siderophore Receptor
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MQRGRAREDVVRSALMRQLCLGLLLGLFLSRASADPVPATMRMTLHIPAQELARALEQFSRATGMAVLVDSQLSRGRRSL AVEGEFTAAEALRRMLGGSGLMAKYSRDDAFTLQVAQVEDVPMPAEKPTPASAAVNRSYATAVQAAIERNLCRSPLTRPG SFRAVLQLWIGRDGVVQHNRLVTSTGDVRRDAALVDSFHTLKIDRPTPGALRQPVTLLLLPESSGKRMECTQWEGVSGG
Sequences:
>Translated_239_residues MQRGRAREDVVRSALMRQLCLGLLLGLFLSRASADPVPATMRMTLHIPAQELARALEQFSRATGMAVLVDSQLSRGRRSL AVEGEFTAAEALRRMLGGSGLMAKYSRDDAFTLQVAQVEDVPMPAEKPTPASAAVNRSYATAVQAAIERNLCRSPLTRPG SFRAVLQLWIGRDGVVQHNRLVTSTGDVRRDAALVDSFHTLKIDRPTPGALRQPVTLLLLPESSGKRMECTQWEGVSGG >Mature_239_residues MQRGRAREDVVRSALMRQLCLGLLLGLFLSRASADPVPATMRMTLHIPAQELARALEQFSRATGMAVLVDSQLSRGRRSL AVEGEFTAAEALRRMLGGSGLMAKYSRDDAFTLQVAQVEDVPMPAEKPTPASAAVNRSYATAVQAAIERNLCRSPLTRPG SFRAVLQLWIGRDGVVQHNRLVTSTGDVRRDAALVDSFHTLKIDRPTPGALRQPVTLLLLPESSGKRMECTQWEGVSGG
Specific function: Feca Is The Outer Membrane Receptor Protein In The Iron(III) Dicitrate Transport System. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25991; Mature: 25991
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRGRAREDVVRSALMRQLCLGLLLGLFLSRASADPVPATMRMTLHIPAQELARALEQFS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHH RATGMAVLVDSQLSRGRRSLAVEGEFTAAEALRRMLGGSGLMAKYSRDDAFTLQVAQVED HHCCEEEEECCHHHCCCHHEEECCCHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEEECC VPMPAEKPTPASAAVNRSYATAVQAAIERNLCRSPLTRPGSFRAVLQLWIGRDGVVQHNR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEECCE LVTSTGDVRRDAALVDSFHTLKIDRPTPGALRQPVTLLLLPESSGKRMECTQWEGVSGG EEECCCCHHHHHHHHCCHHEEEECCCCCCHHHCCEEEEEEECCCCCCEECCCCCCCCCC >Mature Secondary Structure MQRGRAREDVVRSALMRQLCLGLLLGLFLSRASADPVPATMRMTLHIPAQELARALEQFS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHH RATGMAVLVDSQLSRGRRSLAVEGEFTAAEALRRMLGGSGLMAKYSRDDAFTLQVAQVED HHCCEEEEECCHHHCCCHHEEECCCHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEEECC VPMPAEKPTPASAAVNRSYATAVQAAIERNLCRSPLTRPGSFRAVLQLWIGRDGVVQHNR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEECCE LVTSTGDVRRDAALVDSFHTLKIDRPTPGALRQPVTLLLLPESSGKRMECTQWEGVSGG EEECCCCHHHHHHHHCCHHEEEECCCCCCHHHCCEEEEEEECCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA