| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77459412
Identifier: 77459412
GI number: 77459412
Start: 3668385
End: 3669464
Strand: Direct
Name: 77459412
Synonym: Pfl01_3190
Alternate gene names: NA
Gene position: 3668385-3669464 (Clockwise)
Preceding gene: 77459408
Following gene: 77459413
Centisome position: 56.98
GC content: 43.33
Gene sequence:
>1080_bases ATGGCAGTACGAAACATATTTGCTTTTTATAACAACAAAGGTGGAGTTGGCAAAACTACACTGTGCCAAAATGCCGCCAG TCTTTATGCTGAGAATAATCCGGAGCAATTAGTCTTGGTCATAGACTTATGCCCTCAAGCTAACATTTCTCAATTCTTTC TTGGCGGCGCTCATGTAGGTTACGCAGCGAACCAGCGCTTGCAATCGCAAGCAACTCGACGAAACGTAGTTGGCTTTATG GACTGGCTCATTAAGGGAAACTCAGGATTCACAAGCTTGCCTATGAGTTATATGACCCAGGTCTCCCAATACAACACACA CGTTACTGAAAACTTGCATTTAATTGCCGGCGACTCTTTTCTCGAATCACAAACGCTTGCGCTAAACTTCCAGACCATGA ATCCTGGCAACATACACGCATGGAAAGAGTATGTAACTGCCATTGAACGATTATGCGCATTAGAGCTTCAAAAATCCAAT TACGAAGACATGACCGTTTTCATTGACTGCAACCCTAGCTTTTCAATTTACACACAAATGGCTCTGGTATCCTCAACATC GTTAATTGTCCCAACGATGGCCGACTTCAGTTCGCTTGAAGGCATCAAGGGTATACTCATGTTGCTTTATGGGAAATACC CTTCTTCTGCAGCACAAAAATACGCATCAAGCGTTATAACATTCAGCAGTCAAGTGAAAACCTTCGGACTTAAACTTCCG ACACTGTACGAAATTCCTTTCAACAACTTCACGGTTAACGCAGGCGTTGCTAGCGCATACGAATCCGTGAGATTGGAGTT AATAAACTATGCTTGGTCACAATTTCAAGCAGACCCGACTATATTCGCATCATCAAACACTCCCCCTGCAAATTTAGAGC AGTGGGAAGACCTATACACCTCTAACATAAAAGATTTCCACACTGCTGGAAAAGTATCCTCAAGTTTAGGGATACCACTG CATCGCCTCCCATTACAGAGCAGCTACCTGATGCCTAATGGACAAAACATCGGCTTACCACCTAGAAACTACAAAGAATC ACTGGATCATCTGACGGAGTTTGTAAGAAAACTCGCCTAA
Upstream 100 bases:
>100_bases ATTACCTAATTTTCGGGTCTGCATCTGTAGATGCTCTTGCAAGTATAGCGCTTAGCCATCATCATCGAATTTTTCAAAGG TAAAAAAAGGAGATTGCAAC
Downstream 100 bases:
>100_bases ATAACATCCTTTAGAAAATCCAAATATAGATTACAGCTACTCAAATAGAACAAAGATCCATGGGGATGGATTTATTTTGT AGGAAATAGATCTGTCCCCT
Product: ATPase domain-containing protein
Products: NA
Alternate protein names: ATPase; ATPase Domain Protein; Chromosome Partitioning ATPase; Cobyrinic Acid Ac-Diamide Synthase
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MAVRNIFAFYNNKGGVGKTTLCQNAASLYAENNPEQLVLVIDLCPQANISQFFLGGAHVGYAANQRLQSQATRRNVVGFM DWLIKGNSGFTSLPMSYMTQVSQYNTHVTENLHLIAGDSFLESQTLALNFQTMNPGNIHAWKEYVTAIERLCALELQKSN YEDMTVFIDCNPSFSIYTQMALVSSTSLIVPTMADFSSLEGIKGILMLLYGKYPSSAAQKYASSVITFSSQVKTFGLKLP TLYEIPFNNFTVNAGVASAYESVRLELINYAWSQFQADPTIFASSNTPPANLEQWEDLYTSNIKDFHTAGKVSSSLGIPL HRLPLQSSYLMPNGQNIGLPPRNYKESLDHLTEFVRKLA
Sequences:
>Translated_359_residues MAVRNIFAFYNNKGGVGKTTLCQNAASLYAENNPEQLVLVIDLCPQANISQFFLGGAHVGYAANQRLQSQATRRNVVGFM DWLIKGNSGFTSLPMSYMTQVSQYNTHVTENLHLIAGDSFLESQTLALNFQTMNPGNIHAWKEYVTAIERLCALELQKSN YEDMTVFIDCNPSFSIYTQMALVSSTSLIVPTMADFSSLEGIKGILMLLYGKYPSSAAQKYASSVITFSSQVKTFGLKLP TLYEIPFNNFTVNAGVASAYESVRLELINYAWSQFQADPTIFASSNTPPANLEQWEDLYTSNIKDFHTAGKVSSSLGIPL HRLPLQSSYLMPNGQNIGLPPRNYKESLDHLTEFVRKLA >Mature_358_residues AVRNIFAFYNNKGGVGKTTLCQNAASLYAENNPEQLVLVIDLCPQANISQFFLGGAHVGYAANQRLQSQATRRNVVGFMD WLIKGNSGFTSLPMSYMTQVSQYNTHVTENLHLIAGDSFLESQTLALNFQTMNPGNIHAWKEYVTAIERLCALELQKSNY EDMTVFIDCNPSFSIYTQMALVSSTSLIVPTMADFSSLEGIKGILMLLYGKYPSSAAQKYASSVITFSSQVKTFGLKLPT LYEIPFNNFTVNAGVASAYESVRLELINYAWSQFQADPTIFASSNTPPANLEQWEDLYTSNIKDFHTAGKVSSSLGIPLH RLPLQSSYLMPNGQNIGLPPRNYKESLDHLTEFVRKLA
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39851; Mature: 39720
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRNIFAFYNNKGGVGKTTLCQNAASLYAENNPEQLVLVIDLCPQANISQFFLGGAHVG CCHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHEECCCCCC YAANQRLQSQATRRNVVGFMDWLIKGNSGFTSLPMSYMTQVSQYNTHVTENLHLIAGDSF HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCHHCCCEEEEECCCH LESQTLALNFQTMNPGNIHAWKEYVTAIERLCALELQKSNYEDMTVFIDCNPSFSIYTQM HCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH ALVSSTSLIVPTMADFSSLEGIKGILMLLYGKYPSSAAQKYASSVITFSSQVKTFGLKLP HHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC TLYEIPFNNFTVNAGVASAYESVRLELINYAWSQFQADPTIFASSNTPPANLEQWEDLYT EEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH SNIKDFHTAGKVSSSLGIPLHRLPLQSSYLMPNGQNIGLPPRNYKESLDHLTEFVRKLA CCCHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure AVRNIFAFYNNKGGVGKTTLCQNAASLYAENNPEQLVLVIDLCPQANISQFFLGGAHVG CHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHEECCCCCC YAANQRLQSQATRRNVVGFMDWLIKGNSGFTSLPMSYMTQVSQYNTHVTENLHLIAGDSF HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCHHCCCEEEEECCCH LESQTLALNFQTMNPGNIHAWKEYVTAIERLCALELQKSNYEDMTVFIDCNPSFSIYTQM HCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH ALVSSTSLIVPTMADFSSLEGIKGILMLLYGKYPSSAAQKYASSVITFSSQVKTFGLKLP HHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC TLYEIPFNNFTVNAGVASAYESVRLELINYAWSQFQADPTIFASSNTPPANLEQWEDLYT EEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH SNIKDFHTAGKVSSSLGIPLHRLPLQSSYLMPNGQNIGLPPRNYKESLDHLTEFVRKLA CCCHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA