| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459406
Identifier: 77459406
GI number: 77459406
Start: 3664213
End: 3664641
Strand: Direct
Name: 77459406
Synonym: Pfl01_3184
Alternate gene names: NA
Gene position: 3664213-3664641 (Clockwise)
Preceding gene: 77459405
Following gene: 77459408
Centisome position: 56.91
GC content: 56.41
Gene sequence:
>429_bases TTGTGGAACGATCAAATGAAGACCCCGATCCTCCTGCTCCTCGCAATGTATTGCACGGGTACAAGCTCTGCGTTTTCCGG CGGCTTGCAAGCGACAAACGTCAAGCACGGGCCAGCAGGCATCGCCGTCGATGAGCCCTTGGTGTCGGCCAGATCCAAAT TGATCAAACAGGGATGGAAGCCAACCCGGATGCACACCAGCGATGGCTATGAATACAGTGGTTTCGAGCGCGAGCTGGCT GCGCGCAATTTCCTGGAACTCGACACCTGCTCTTTCGATAGCTCGCGCTGCATCCTGTTCTATTCAAAGAAAGGCGCCTG CTTGCGAGTCGACACCATGGGTGAGCAGCTCAAAGACATGACGGTTACGCGATGGGCTGATGAATGCCCGGATGCGCCTT CAGAGCCAGATAGCGGCGACGCGGGATAA
Upstream 100 bases:
>100_bases ACTGTCGGAGAAGAAATCAAAGACATGAAAATTTATTCCTGGAGCTTCAAATGTCCCGAAAAGGATTGAAGCCCAAAGGG AACAGAAATCTGTTCCTTTT
Downstream 100 bases:
>100_bases GAAACAAAGGGGACTGAATGAAATATTCAGTCCCCTTTTCTCTAGGAGCGGGCTTGCTCGCGAAGGCGCCAGAATTGACA CCAGCTTAATCAGCAGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MWNDQMKTPILLLLAMYCTGTSSAFSGGLQATNVKHGPAGIAVDEPLVSARSKLIKQGWKPTRMHTSDGYEYSGFERELA ARNFLELDTCSFDSSRCILFYSKKGACLRVDTMGEQLKDMTVTRWADECPDAPSEPDSGDAG
Sequences:
>Translated_142_residues MWNDQMKTPILLLLAMYCTGTSSAFSGGLQATNVKHGPAGIAVDEPLVSARSKLIKQGWKPTRMHTSDGYEYSGFERELA ARNFLELDTCSFDSSRCILFYSKKGACLRVDTMGEQLKDMTVTRWADECPDAPSEPDSGDAG >Mature_142_residues MWNDQMKTPILLLLAMYCTGTSSAFSGGLQATNVKHGPAGIAVDEPLVSARSKLIKQGWKPTRMHTSDGYEYSGFERELA ARNFLELDTCSFDSSRCILFYSKKGACLRVDTMGEQLKDMTVTRWADECPDAPSEPDSGDAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15595; Mature: 15595
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWNDQMKTPILLLLAMYCTGTSSAFSGGLQATNVKHGPAGIAVDEPLVSARSKLIKQGWK CCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCC PTRMHTSDGYEYSGFERELAARNFLELDTCSFDSSRCILFYSKKGACLRVDTMGEQLKDM CCCCCCCCCCCCCCHHHHHHHHCCEECCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHH TVTRWADECPDAPSEPDSGDAG HHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MWNDQMKTPILLLLAMYCTGTSSAFSGGLQATNVKHGPAGIAVDEPLVSARSKLIKQGWK CCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCC PTRMHTSDGYEYSGFERELAARNFLELDTCSFDSSRCILFYSKKGACLRVDTMGEQLKDM CCCCCCCCCCCCCCHHHHHHHHCCEECCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHH TVTRWADECPDAPSEPDSGDAG HHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA