| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is pstS [H]
Identifier: 77459394
GI number: 77459394
Start: 3651473
End: 3652582
Strand: Reverse
Name: pstS [H]
Synonym: Pfl01_3172
Alternate gene names: 77459394
Gene position: 3652582-3651473 (Counterclockwise)
Preceding gene: 77459395
Following gene: 77459393
Centisome position: 56.73
GC content: 60.9
Gene sequence:
>1110_bases ATGTTCAAGCGCACTCTGATCGCAGCTTCCCTGACCGTCGCTGCCCTGGCTTCCGCCCAGGCCATGGCCGCCAACGTAAC CGGTGGTGGCGCGACTCTGCCTGCCGCTCTGTACAAAGGTTCTGCCAACAGCATCCTGCCAGCCAACTTCAGCTACCTGG GTACCGGTAGCGGCACCGGCAAGACCGCTTTCCTGACCAACAACTCGGCACTGTTCAACACCACCGGTTCGGTTCACTTC GCCGGTAGCGACTCGATCCTCAGCGCTTCGGAAATCAGCACCTACAACACCAACTTCGGCGCTTCGTACGGCCCGCTGAT TCAACTGCCTTCGGTGGCTACTTCGGTTGCCATTCCGTACAAAAAATCCGGTCAGACCGCTCTGAACCTGACCAGCGCTC AGCTGTGCGACGCCTTCTCCGGCGCCAAAACCACCTGGGGCGCTCTGCTGGGCACTTCCGACACCACGCCGATCCGCGTT GTTTATCGCAACGTTTCCAGCGGCACCACGGAAATCCTGACCCGTCACCTGAACTCGATCTGCCCGACCAAGTTCGCCAC CAACTCCACCTTCGCCAGCGCTCGTCTGCCAGCCGGTTCGACCCTGCCTACGACCTGGGTAGGCGTTGCCGGTACTGCTG ACGTGGCCACTCAAGTCAACGCCGTTGACGGCTCCATCGGTTACGTTGGTCCGGACGGTGTGAACGCCGCCAGCAACGCC GTGGTTGCTCGCGTCAACGGCGTACAGCCAACCACCGCCAACGTTTCGCTGGCACTGGGTTCGGCGACTCTGCCAACCGC GCCTTCGAACCCTGCCCAGTGGGTACCGGTCGTTCCTAACCCAGCCAGCGGTTACCCGATCGTGGCTTACACCAACTTCA TCTTCGGCCAGTGCTACAAGGACGCAACCGTGGCCGCTGACGTCAAATCCTTCCTGACCACTCACTACAGCAACCCGGGC AACAACGCTGCCACCATCGCTCACAGCTTCACTCCGGTTCCAACCAACTGGAAAGCGGCCGTGACTGCCAACTTCATCAC CAACACCTCGGGCAACAACCTGGACATCAACAACGCCAGCGTCTGCAACGCTGTCGGCCGTCCTTTGTAA
Upstream 100 bases:
>100_bases CACGGACCCCGCTTGCGAAGGTCAGCGGTGAGTCTTCCCAGTGTCATGCAAGACCCCTGCAAACCTGTGTTCACACCCAA CGTTGAAAAGGAGATTCTTC
Downstream 100 bases:
>100_bases GCCTCGTTTCACGGCAATGAAATGGCAGCAGCCTTCGGGCTGCTGCCATTTTTTTTGGACGATCTACTCCTCATTCATGA AGTTTGTGTGACATCCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: L-AP; Low molecular weight phosphatase [H]
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MFKRTLIAASLTVAALASAQAMAANVTGGGATLPAALYKGSANSILPANFSYLGTGSGTGKTAFLTNNSALFNTTGSVHF AGSDSILSASEISTYNTNFGASYGPLIQLPSVATSVAIPYKKSGQTALNLTSAQLCDAFSGAKTTWGALLGTSDTTPIRV VYRNVSSGTTEILTRHLNSICPTKFATNSTFASARLPAGSTLPTTWVGVAGTADVATQVNAVDGSIGYVGPDGVNAASNA VVARVNGVQPTTANVSLALGSATLPTAPSNPAQWVPVVPNPASGYPIVAYTNFIFGQCYKDATVAADVKSFLTTHYSNPG NNAATIAHSFTPVPTNWKAAVTANFITNTSGNNLDINNASVCNAVGRPL
Sequences:
>Translated_369_residues MFKRTLIAASLTVAALASAQAMAANVTGGGATLPAALYKGSANSILPANFSYLGTGSGTGKTAFLTNNSALFNTTGSVHF AGSDSILSASEISTYNTNFGASYGPLIQLPSVATSVAIPYKKSGQTALNLTSAQLCDAFSGAKTTWGALLGTSDTTPIRV VYRNVSSGTTEILTRHLNSICPTKFATNSTFASARLPAGSTLPTTWVGVAGTADVATQVNAVDGSIGYVGPDGVNAASNA VVARVNGVQPTTANVSLALGSATLPTAPSNPAQWVPVVPNPASGYPIVAYTNFIFGQCYKDATVAADVKSFLTTHYSNPG NNAATIAHSFTPVPTNWKAAVTANFITNTSGNNLDINNASVCNAVGRPL >Mature_369_residues MFKRTLIAASLTVAALASAQAMAANVTGGGATLPAALYKGSANSILPANFSYLGTGSGTGKTAFLTNNSALFNTTGSVHF AGSDSILSASEISTYNTNFGASYGPLIQLPSVATSVAIPYKKSGQTALNLTSAQLCDAFSGAKTTWGALLGTSDTTPIRV VYRNVSSGTTEILTRHLNSICPTKFATNSTFASARLPAGSTLPTTWVGVAGTADVATQVNAVDGSIGYVGPDGVNAASNA VVARVNGVQPTTANVSLALGSATLPTAPSNPAQWVPVVPNPASGYPIVAYTNFIFGQCYKDATVAADVKSFLTTHYSNPG NNAATIAHSFTPVPTNWKAAVTANFITNTSGNNLDINNASVCNAVGRPL
Specific function: Has both a phosphomonoesterase and phosphodiesterase activity [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Secreted. Periplasm. Note=Secreted and to some extent periplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 37457; Mature: 37457
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKRTLIAASLTVAALASAQAMAANVTGGGATLPAALYKGSANSILPANFSYLGTGSGTG CCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCC KTAFLTNNSALFNTTGSVHFAGSDSILSASEISTYNTNFGASYGPLIQLPSVATSVAIPY CEEEEECCCEEEECCCEEEECCCCCEEEHHHCEEECCCCCCCCCCEEECCCHHHEEECCC KKSGQTALNLTSAQLCDAFSGAKTTWGALLGTSDTTPIRVVYRNVSSGTTEILTRHLNSI CCCCCEEEEECHHHHHHHHCCCCCHHHHEECCCCCCEEEEEEEECCCCHHHHHHHHHHHH CPTKFATNSTFASARLPAGSTLPTTWVGVAGTADVATQVNAVDGSIGYVGPDGVNAASNA CCCCCCCCCCEEEEECCCCCCCCCEEEECCCCHHHHEEEEECCCCCCEECCCCCCCCCCE VVARVNGVQPTTANVSLALGSATLPTAPSNPAQWVPVVPNPASGYPIVAYTNFIFGQCYK EEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHC DATVAADVKSFLTTHYSNPGNNAATIAHSFTPVPTNWKAAVTANFITNTSGNNLDINNAS CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEECCCCH VCNAVGRPL HHHHCCCCC >Mature Secondary Structure MFKRTLIAASLTVAALASAQAMAANVTGGGATLPAALYKGSANSILPANFSYLGTGSGTG CCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCC KTAFLTNNSALFNTTGSVHFAGSDSILSASEISTYNTNFGASYGPLIQLPSVATSVAIPY CEEEEECCCEEEECCCEEEECCCCCEEEHHHCEEECCCCCCCCCCEEECCCHHHEEECCC KKSGQTALNLTSAQLCDAFSGAKTTWGALLGTSDTTPIRVVYRNVSSGTTEILTRHLNSI CCCCCEEEEECHHHHHHHHCCCCCHHHHEECCCCCCEEEEEEEECCCCHHHHHHHHHHHH CPTKFATNSTFASARLPAGSTLPTTWVGVAGTADVATQVNAVDGSIGYVGPDGVNAASNA CCCCCCCCCCEEEEECCCCCCCCCEEEECCCCHHHHEEEEECCCCCCEECCCCCCCCCCE VVARVNGVQPTTANVSLALGSATLPTAPSNPAQWVPVVPNPASGYPIVAYTNFIFGQCYK EEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHC DATVAADVKSFLTTHYSNPGNNAATIAHSFTPVPTNWKAAVTANFITNTSGNNLDINNAS CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEECCCCH VCNAVGRPL HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 8454193 [H]