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The map label for this gene is nrtB [H]

Identifier: 77459382

GI number: 77459382

Start: 3628267

End: 3629091

Strand: Reverse

Name: nrtB [H]

Synonym: Pfl01_3160

Alternate gene names: 77459382

Gene position: 3629091-3628267 (Counterclockwise)

Preceding gene: 77459383

Following gene: 77459381

Centisome position: 56.37

GC content: 64.24

Gene sequence:

>825_bases
GTGAGGGGGTTCGATCTCAGTCATCACACGGAATTCCGATCCATGAAAATCCCGAAAGCCCGCTGGACCACCAGAGCAAC
CTCCATAGCGTTCTGCCTGCTCTTCTGGCAACTAGCCGCCAGCCACCACTGGAACCTCGGCCTCGTCACCTTCGCCAACG
TCCCGACCCCGCTGGCCGTGATCGAAGCCGCGCTCGGCCTCGGCGACTCCGGCAAGCTCATCCAGCACCTGAGCGCCAGC
CTTGGCCGGGTCTTCGCCGGCTACCTCGCGGCGCTGGTGATCGGCATCGCCCTGGGCCTGGCCATCGGCCGTTCGAAATG
GGCCGAAGACCTGCTGCTGCCACCGCTGGAAGTACTGCGCCCAATCCCCGCCGTGGCATGGATTCCACTGGCCATCCTGA
TGTTCCCGTCGTCGGAACTGTCGATGGTCTTCATCACCTTCACCGGCGCGCTGTTCCCGATCCTGCTCAACACCGTGCAC
GGCGTCGAAGGCGTCGACCCGCGGCTGATCGCCTCGGCCAAAAGCCTCGGGGCCGGGCGTCGGGCGATCCTGCTGGAAGT
GATCCTGCCGGGCGCCGCACCGAGCATCATCACCGGGCTCGCCATCGGCATGGGCACCTCGTGGTTCTGTCTGGTGACCG
CCGAAATGATCTCCGGTCAGTTCGGCATCGGTTACTACACCTGGGAGTCCTACACCATCCAGAACTACGCCGACATCGTG
GTCGGCATGTTGCTGATCGGCGTGTTGGGCATGGGCAGCAGCCTGCTGATCAAACGCCTGGGCGGGCTGTTCACTCCCTG
GCATCGACCACGAGGAAAAGCCTGA

Upstream 100 bases:

>100_bases
AAATCATGAACATCTGCTCGTTCTCGAGTCGGGTACAGGTTTTGAAAGGCTTGAAGATCTGCCCCCTTTCCCCCTCGCCC
CCTTGGGGGAGAGGGCTGGG

Downstream 100 bases:

>100_bases
TGAGCGTGATGCAAACCCCGGAAGGGCGGATCGATATCCGCCAGTTGTCCATCGTCCTCGGCGAAGGCCGGCAAGCGTTC
GAGGCGGTGCAGGGCCTGGA

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRGFDLSHHTEFRSMKIPKARWTTRATSIAFCLLFWQLAASHHWNLGLVTFANVPTPLAVIEAALGLGDSGKLIQHLSAS
LGRVFAGYLAALVIGIALGLAIGRSKWAEDLLLPPLEVLRPIPAVAWIPLAILMFPSSELSMVFITFTGALFPILLNTVH
GVEGVDPRLIASAKSLGAGRRAILLEVILPGAAPSIITGLAIGMGTSWFCLVTAEMISGQFGIGYYTWESYTIQNYADIV
VGMLLIGVLGMGSSLLIKRLGGLFTPWHRPRGKA

Sequences:

>Translated_274_residues
MRGFDLSHHTEFRSMKIPKARWTTRATSIAFCLLFWQLAASHHWNLGLVTFANVPTPLAVIEAALGLGDSGKLIQHLSAS
LGRVFAGYLAALVIGIALGLAIGRSKWAEDLLLPPLEVLRPIPAVAWIPLAILMFPSSELSMVFITFTGALFPILLNTVH
GVEGVDPRLIASAKSLGAGRRAILLEVILPGAAPSIITGLAIGMGTSWFCLVTAEMISGQFGIGYYTWESYTIQNYADIV
VGMLLIGVLGMGSSLLIKRLGGLFTPWHRPRGKA
>Mature_274_residues
MRGFDLSHHTEFRSMKIPKARWTTRATSIAFCLLFWQLAASHHWNLGLVTFANVPTPLAVIEAALGLGDSGKLIQHLSAS
LGRVFAGYLAALVIGIALGLAIGRSKWAEDLLLPPLEVLRPIPAVAWIPLAILMFPSSELSMVFITFTGALFPILLNTVH
GVEGVDPRLIASAKSLGAGRRAILLEVILPGAAPSIITGLAIGMGTSWFCLVTAEMISGQFGIGYYTWESYTIQNYADIV
VGMLLIGVLGMGSSLLIKRLGGLFTPWHRPRGKA

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=257, Percent_Identity=34.6303501945525, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1786564, Length=271, Percent_Identity=33.5793357933579, Blast_Score=118, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR005889 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29443; Mature: 29443

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGFDLSHHTEFRSMKIPKARWTTRATSIAFCLLFWQLAASHHWNLGLVTFANVPTPLAV
CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH
IEAALGLGDSGKLIQHLSASLGRVFAGYLAALVIGIALGLAIGRSKWAEDLLLPPLEVLR
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC
PIPAVAWIPLAILMFPSSELSMVFITFTGALFPILLNTVHGVEGVDPRLIASAKSLGAGR
CCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCH
RAILLEVILPGAAPSIITGLAIGMGTSWFCLVTAEMISGQFGIGYYTWESYTIQNYADIV
HHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH
VGMLLIGVLGMGSSLLIKRLGGLFTPWHRPRGKA
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRGFDLSHHTEFRSMKIPKARWTTRATSIAFCLLFWQLAASHHWNLGLVTFANVPTPLAV
CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH
IEAALGLGDSGKLIQHLSASLGRVFAGYLAALVIGIALGLAIGRSKWAEDLLLPPLEVLR
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC
PIPAVAWIPLAILMFPSSELSMVFITFTGALFPILLNTVHGVEGVDPRLIASAKSLGAGR
CCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCH
RAILLEVILPGAAPSIITGLAIGMGTSWFCLVTAEMISGQFGIGYYTWESYTIQNYADIV
HHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH
VGMLLIGVLGMGSSLLIKRLGGLFTPWHRPRGKA
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]