| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459328
Identifier: 77459328
GI number: 77459328
Start: 3557831
End: 3560125
Strand: Reverse
Name: 77459328
Synonym: Pfl01_3106
Alternate gene names: NA
Gene position: 3560125-3557831 (Counterclockwise)
Preceding gene: 77459330
Following gene: 77459327
Centisome position: 55.3
GC content: 61.53
Gene sequence:
>2295_bases ATGTCGTACCGCGTCATCAGCATTGCATTGCTGTTTTTAAGCTTTGGCGCGGCGGCGCAGAGTCCCGCTGTTTCTTCTTC TATTTCCTACACCCGGGACATCCAGCCGATCTTCACCGAAAAGTGTGTGGCCTGCCATGCGTGCTACGACTCTGCTTGCC AGCTTAATCTGGGCAGCGGCGAAGGTGCGGCCCGTGGCGCGAGCAAGATGCCCGTCTACGATGGCGAACGCACCCAGGCG GCGCCGACCACGCGGCTGTTCTATGACGCCTTCGGCAAACGGGCCTGGCAGCAGAAAGATTTCTACTCGGTGCTCGACGC CCAGGGCAGTCAGGCGGCGCTGATGGCGCGCATGCTGGAGCTGGGGCACAAAACGCCACTGACCCCCAACGCCAAATTGC CGGAAGACATCGTGCTGGGCCTCAATCGCGAGAACCTGTGCGCGATGCCCGCCGAGTTCGACGGCTATGCCGGCGCCCAT CCGAAAGAGGGCATGCCGCTGGCGGTGACCGGTCTGACCGATCAGCAATATCAGACGCTGCAACGCTGGCTCGCTTCCGG TGCGCCGATCGACGAGCAAGGCCTGGCGCCAAGCGCTAAGGAGGCGATGCAGATCGTCCAGTGGGAAAACCTGCTCAACC AGCCTGGCGCGCGGGAAAGTCTGGTCGGGCGCTGGTTGTTCGAACACTGGTTTTTGGCGCACATCTATTTCAAGGACGGC GAGCCGGGGCATTACTTCCAGTGGGTGCGTTCGCGCACACCGACCGGCCAGCCGATCGATCTGATCGCCACGCGTCGCCC GAACGACGATCCGGGCACCCAGGTTTACTATCGCTTGTGGCCGGTGCAGGGCGTGATCGTGCACAAGACCCACATCACCT ATCCGCTGAGCGCGGCGAAGATGGCGCGGGTCAAAAGCCTGTTCTACAACGGCAACTGGCAGGTCAACGCTTTGCCGGGC TACGGGCCGCAGAGTCGAGCCAACCCGTTCGCGACCTTCGAGGCGATCCCGGCGCAGGCGCGTTACCAGTTCATGCTCGA TAACGCCGAATACTTCGTGCGCACCTTCATTCGCGGCCCAGTGTGCCGTGGGCAGATCGCGACCGACGTGATCCGCGACA ACTTCTGGGCGCTGTTCCAGGCGCCGGAACACGACCTGTACATCACCGACCCGAACTATCGCGGCCAGGCCACGCCGTTG CTGGCCATGCCGGGGCAGAACGACGATGTCGGCAGTGTCCTGAGCCTGTGGCACAACTACCGCAACAAGCGAAACCAATA CGAAGCCCTGCGCCGTGACAGCTACGCCGACCTGCCGGCACCGAGCTGGTCGACCCTGTGGGCCGGCAACGACAACGCCT TGCTCAGCATCTTCCGTCACTTCGACAGCGCTTCGGTGACCAAGGGCCTGATCGGCGAGGTGCCGCAGACGATGTGGCTG TTCGACTATCCGCTGCTGGAGCGCACCTATTACCAGCTGGCGGTGAATTTCGATGTGTTCGGCAACGTCTCTCATCAGGC GCAAACACGCCTGTATTTCGACCTGATCCGCAACGGCGCCGAGCAGAACTTCCTGCGCCTGATGCCTGCCGATTCCCGCG AGGGTTACCTTGACGATTGGTACCAGAGCAGCGGCCAGTTCAAGATGTGGCTCGATTACGAAGCCATCGACGACGACAAG CCGACCGCACTGAAACTCGACGAGAAAGACCCGAAACACGATTTCGCCATGCAATTGCTGGCGCGCTACGGCGATCTCAA CGCGCGTCCGGATCCGATCAACCGTTGCGAAGACGCCTATTGCTCGCGCCCGAACATCGACCCGGCGCTGCAAAATGCCG AGCAGGCGCTGAGTCGCCTGACTTCGCGCCCGGCGGCGGGGCTGAAAGTGATCGATCAATTGCCGGAAGCCACCATGCTG CGGGTTGAAACCCGTAGCGGCAAACGTGAGGTCTACAGCCTGCTGCGCAATCGTGCCCACAGCAACGTGGCGTTCCTGCT CGGTGAATCGCTGCGTTATCAGCCGGGCCTGGACACGCTGACGATCTATCCAGGCGTGCTCAGCAGCTACCCGAATTTCA TGTTCAACGTCCCGGCGGATCAGGTGCCTGCGTTTGTCGATGCCATGGAAAACGCGAAGGATGCGCCGCAATTCGAGAAG ATCGTCGAACGTTGGGGCATCCGCCGCAGTCATCCGCAGTTCTGGTTCTATTTCCACGACCTGAGCCAGTACATCCACGA GACCGAGCCGGTGGAAGAGGGCGTGCTGGATATGAACCGGTACGAGAATCTTTGA
Upstream 100 bases:
>100_bases TTAGAGCATGTGGCGCTTTTGCATGAATATCGCTCATGTTGGTACGGGCGTCATAACGGTAGAATCGCGGCGTTTTTTCT TCAGGATCAGGATCAGGGAC
Downstream 100 bases:
>100_bases TCGTTTGAACGATGGCGGTTGTCCCAATCCTGTGATGTACGGAATCGGGAGCGCCATCGATGTTGATTTCAGTGCAGGCC CTGCGAGCGCTCGCCGCGTG
Product: Fatty acid cistrans isomerase
Products: NA
Alternate protein names: Fatty Acid Cistrans Isomerase; Esterified Fatty Acid Cis/Trans Isomerase; Cis/Trans Isomerase; 9-Hexadecenoic Acid Cis-Trans Isomerase; Fatty Acid Cis/Trans Isomerase Superfamily; Fatty Acid Cis/Trans Isomerase Superfamily Protein; Fatty Acid Cis-Trans Isomerase; Exported Fatty Acid Cis/Trans Isomerase; Esterified Fatty Acid Cis/Trans Isomerase Family Protein
Number of amino acids: Translated: 764; Mature: 763
Protein sequence:
>764_residues MSYRVISIALLFLSFGAAAQSPAVSSSISYTRDIQPIFTEKCVACHACYDSACQLNLGSGEGAARGASKMPVYDGERTQA APTTRLFYDAFGKRAWQQKDFYSVLDAQGSQAALMARMLELGHKTPLTPNAKLPEDIVLGLNRENLCAMPAEFDGYAGAH PKEGMPLAVTGLTDQQYQTLQRWLASGAPIDEQGLAPSAKEAMQIVQWENLLNQPGARESLVGRWLFEHWFLAHIYFKDG EPGHYFQWVRSRTPTGQPIDLIATRRPNDDPGTQVYYRLWPVQGVIVHKTHITYPLSAAKMARVKSLFYNGNWQVNALPG YGPQSRANPFATFEAIPAQARYQFMLDNAEYFVRTFIRGPVCRGQIATDVIRDNFWALFQAPEHDLYITDPNYRGQATPL LAMPGQNDDVGSVLSLWHNYRNKRNQYEALRRDSYADLPAPSWSTLWAGNDNALLSIFRHFDSASVTKGLIGEVPQTMWL FDYPLLERTYYQLAVNFDVFGNVSHQAQTRLYFDLIRNGAEQNFLRLMPADSREGYLDDWYQSSGQFKMWLDYEAIDDDK PTALKLDEKDPKHDFAMQLLARYGDLNARPDPINRCEDAYCSRPNIDPALQNAEQALSRLTSRPAAGLKVIDQLPEATML RVETRSGKREVYSLLRNRAHSNVAFLLGESLRYQPGLDTLTIYPGVLSSYPNFMFNVPADQVPAFVDAMENAKDAPQFEK IVERWGIRRSHPQFWFYFHDLSQYIHETEPVEEGVLDMNRYENL
Sequences:
>Translated_764_residues MSYRVISIALLFLSFGAAAQSPAVSSSISYTRDIQPIFTEKCVACHACYDSACQLNLGSGEGAARGASKMPVYDGERTQA APTTRLFYDAFGKRAWQQKDFYSVLDAQGSQAALMARMLELGHKTPLTPNAKLPEDIVLGLNRENLCAMPAEFDGYAGAH PKEGMPLAVTGLTDQQYQTLQRWLASGAPIDEQGLAPSAKEAMQIVQWENLLNQPGARESLVGRWLFEHWFLAHIYFKDG EPGHYFQWVRSRTPTGQPIDLIATRRPNDDPGTQVYYRLWPVQGVIVHKTHITYPLSAAKMARVKSLFYNGNWQVNALPG YGPQSRANPFATFEAIPAQARYQFMLDNAEYFVRTFIRGPVCRGQIATDVIRDNFWALFQAPEHDLYITDPNYRGQATPL LAMPGQNDDVGSVLSLWHNYRNKRNQYEALRRDSYADLPAPSWSTLWAGNDNALLSIFRHFDSASVTKGLIGEVPQTMWL FDYPLLERTYYQLAVNFDVFGNVSHQAQTRLYFDLIRNGAEQNFLRLMPADSREGYLDDWYQSSGQFKMWLDYEAIDDDK PTALKLDEKDPKHDFAMQLLARYGDLNARPDPINRCEDAYCSRPNIDPALQNAEQALSRLTSRPAAGLKVIDQLPEATML RVETRSGKREVYSLLRNRAHSNVAFLLGESLRYQPGLDTLTIYPGVLSSYPNFMFNVPADQVPAFVDAMENAKDAPQFEK IVERWGIRRSHPQFWFYFHDLSQYIHETEPVEEGVLDMNRYENL >Mature_763_residues SYRVISIALLFLSFGAAAQSPAVSSSISYTRDIQPIFTEKCVACHACYDSACQLNLGSGEGAARGASKMPVYDGERTQAA PTTRLFYDAFGKRAWQQKDFYSVLDAQGSQAALMARMLELGHKTPLTPNAKLPEDIVLGLNRENLCAMPAEFDGYAGAHP KEGMPLAVTGLTDQQYQTLQRWLASGAPIDEQGLAPSAKEAMQIVQWENLLNQPGARESLVGRWLFEHWFLAHIYFKDGE PGHYFQWVRSRTPTGQPIDLIATRRPNDDPGTQVYYRLWPVQGVIVHKTHITYPLSAAKMARVKSLFYNGNWQVNALPGY GPQSRANPFATFEAIPAQARYQFMLDNAEYFVRTFIRGPVCRGQIATDVIRDNFWALFQAPEHDLYITDPNYRGQATPLL AMPGQNDDVGSVLSLWHNYRNKRNQYEALRRDSYADLPAPSWSTLWAGNDNALLSIFRHFDSASVTKGLIGEVPQTMWLF DYPLLERTYYQLAVNFDVFGNVSHQAQTRLYFDLIRNGAEQNFLRLMPADSREGYLDDWYQSSGQFKMWLDYEAIDDDKP TALKLDEKDPKHDFAMQLLARYGDLNARPDPINRCEDAYCSRPNIDPALQNAEQALSRLTSRPAAGLKVIDQLPEATMLR VETRSGKREVYSLLRNRAHSNVAFLLGESLRYQPGLDTLTIYPGVLSSYPNFMFNVPADQVPAFVDAMENAKDAPQFEKI VERWGIRRSHPQFWFYFHDLSQYIHETEPVEEGVLDMNRYENL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86735; Mature: 86603
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRVISIALLFLSFGAAAQSPAVSSSISYTRDIQPIFTEKCVACHACYDSACQLNLGSG CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCEEEECCCC EGAARGASKMPVYDGERTQAAPTTRLFYDAFGKRAWQQKDFYSVLDAQGSQAALMARMLE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LGHKTPLTPNAKLPEDIVLGLNRENLCAMPAEFDGYAGAHPKEGMPLAVTGLTDQQYQTL HCCCCCCCCCCCCCHHHEECCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHH QRWLASGAPIDEQGLAPSAKEAMQIVQWENLLNQPGARESLVGRWLFEHWFLAHIYFKDG HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEEEECC EPGHYFQWVRSRTPTGQPIDLIATRRPNDDPGTQVYYRLWPVQGVIVHKTHITYPLSAAK CCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCEEEEEEEEECCCCHHHH MARVKSLFYNGNWQVNALPGYGPQSRANPFATFEAIPAQARYQFMLDNAEYFVRTFIRGP HHHHHHHEECCCEEEEECCCCCCCCCCCCCHHHHHCCCCCEEEEEECCHHHHHHHHHHCC VCRGQIATDVIRDNFWALFQAPEHDLYITDPNYRGQATPLLAMPGQNDDVGSVLSLWHNY CCCCHHHHHHHHCCCEEEEECCCCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHH RNKRNQYEALRRDSYADLPAPSWSTLWAGNDNALLSIFRHFDSASVTKGLIGEVPQTMWL HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHH FDYPLLERTYYQLAVNFDVFGNVSHQAQTRLYFDLIRNGAEQNFLRLMPADSREGYLDDW CCCHHHHHEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHH YQSSGQFKMWLDYEAIDDDKPTALKLDEKDPKHDFAMQLLARYGDLNARPDPINRCEDAY HCCCCCEEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH CSRPNIDPALQNAEQALSRLTSRPAAGLKVIDQLPEATMLRVETRSGKREVYSLLRNRAH CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCC SNVAFLLGESLRYQPGLDTLTIYPGVLSSYPNFMFNVPADQVPAFVDAMENAKDAPQFEK CCEEEEECCCCCCCCCCCEEEECCHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCHHHHH IVERWGIRRSHPQFWFYFHDLSQYIHETEPVEEGVLDMNRYENL HHHHHCCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure SYRVISIALLFLSFGAAAQSPAVSSSISYTRDIQPIFTEKCVACHACYDSACQLNLGSG CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCEEEECCCC EGAARGASKMPVYDGERTQAAPTTRLFYDAFGKRAWQQKDFYSVLDAQGSQAALMARMLE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LGHKTPLTPNAKLPEDIVLGLNRENLCAMPAEFDGYAGAHPKEGMPLAVTGLTDQQYQTL HCCCCCCCCCCCCCHHHEECCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHH QRWLASGAPIDEQGLAPSAKEAMQIVQWENLLNQPGARESLVGRWLFEHWFLAHIYFKDG HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEEEECC EPGHYFQWVRSRTPTGQPIDLIATRRPNDDPGTQVYYRLWPVQGVIVHKTHITYPLSAAK CCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCEEEEEEEEECCCCHHHH MARVKSLFYNGNWQVNALPGYGPQSRANPFATFEAIPAQARYQFMLDNAEYFVRTFIRGP HHHHHHHEECCCEEEEECCCCCCCCCCCCCHHHHHCCCCCEEEEEECCHHHHHHHHHHCC VCRGQIATDVIRDNFWALFQAPEHDLYITDPNYRGQATPLLAMPGQNDDVGSVLSLWHNY CCCCHHHHHHHHCCCEEEEECCCCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHH RNKRNQYEALRRDSYADLPAPSWSTLWAGNDNALLSIFRHFDSASVTKGLIGEVPQTMWL HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHH FDYPLLERTYYQLAVNFDVFGNVSHQAQTRLYFDLIRNGAEQNFLRLMPADSREGYLDDW CCCHHHHHEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHH YQSSGQFKMWLDYEAIDDDKPTALKLDEKDPKHDFAMQLLARYGDLNARPDPINRCEDAY HCCCCCEEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH CSRPNIDPALQNAEQALSRLTSRPAAGLKVIDQLPEATMLRVETRSGKREVYSLLRNRAH CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCC SNVAFLLGESLRYQPGLDTLTIYPGVLSSYPNFMFNVPADQVPAFVDAMENAKDAPQFEK CCEEEEECCCCCCCCCCCEEEECCHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCHHHHH IVERWGIRRSHPQFWFYFHDLSQYIHETEPVEEGVLDMNRYENL HHHHHCCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA