| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459323
Identifier: 77459323
GI number: 77459323
Start: 3554097
End: 3554798
Strand: Direct
Name: 77459323
Synonym: Pfl01_3101
Alternate gene names: NA
Gene position: 3554097-3554798 (Clockwise)
Preceding gene: 77459322
Following gene: 77459324
Centisome position: 55.2
GC content: 65.53
Gene sequence:
>702_bases ATGATCAAGCGTATTGCGCAGACCGCAGGTTTCACCGGCCTTCTGGCCGCCCTGCTCCTGACGTTGCTGCAAAGCTTCTG GGTTTCGCCGCTGATTTTGCAGGCCGAGACCTTCGAGAAAGCCGAACCGGTGGCCGAAGTTCACGAACACGCCGCCGGCA CCGCCGCCCACACCCACGATGCCGAAGCCTGGGAGCCGGAAGACGGCTGGCAGCGCGTGGTGTCCACCACCGGCGGCAAT CTGGTGGTTGCCGTGGGTTTCGCCCTGATGCTGGCGGGCCTGTACACCCTGCGTGCGCCGACCAAAACTTCGCAAGGCCT GCTCTGGGGTCTGGCCGGTTATGCGACCTTCGTACTCGCGCCGACCATGGGCCTGCCACCTGAGCTGCCGGGCACCGCCG CCGCGGATCTGGCCTCGCGGCAGATGTGGTGGATCGGCACTGCGGCCTCCACCGCTGTCGGCCTGGCCTTGATAGCGTTC AGCCGCCACTGGCTGATGAAGACCCTCGGCGTGGCGATCCTTGCCGTGCCGCACGTGATCGGCGCGCCGCAACCGGAAGT GCATTCGATGCTCGCCCCGGAAGCCCTCGAAGCCCAGTTCAAAATCGCTTCGCAGCTGACCAACGTCGCGTTCTGGCTAG CCCTGGGCCTGATCAGCGCCTGGTTGTTCCGCCGCAAAAGCGAAGGTCAGTACCACGCATGA
Upstream 100 bases:
>100_bases TGGTGTACTTCGCCGGTTTCTCGCACATCGAAGCGGTGCACAACGCCGCGCACGATACCCGCCACAGCGCCGCGTTCCCG TGCCACTGAGACCTGCCGAC
Downstream 100 bases:
>100_bases CCGATGACAGCGCAGCGCCGACCTTCGTGGTCGGCCTGGGCTGCCAGCGCGGCTGCCCGGCCAGTACGCTGCGTGCATTA CTTGATCAGGCATTGCAGGC
Product: cobalt transporter subunit CbtA
Products: NA
Alternate protein names: Integral Membrane Protein; Cobalt Transporter Subunit
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MIKRIAQTAGFTGLLAALLLTLLQSFWVSPLILQAETFEKAEPVAEVHEHAAGTAAHTHDAEAWEPEDGWQRVVSTTGGN LVVAVGFALMLAGLYTLRAPTKTSQGLLWGLAGYATFVLAPTMGLPPELPGTAAADLASRQMWWIGTAASTAVGLALIAF SRHWLMKTLGVAILAVPHVIGAPQPEVHSMLAPEALEAQFKIASQLTNVAFWLALGLISAWLFRRKSEGQYHA
Sequences:
>Translated_233_residues MIKRIAQTAGFTGLLAALLLTLLQSFWVSPLILQAETFEKAEPVAEVHEHAAGTAAHTHDAEAWEPEDGWQRVVSTTGGN LVVAVGFALMLAGLYTLRAPTKTSQGLLWGLAGYATFVLAPTMGLPPELPGTAAADLASRQMWWIGTAASTAVGLALIAF SRHWLMKTLGVAILAVPHVIGAPQPEVHSMLAPEALEAQFKIASQLTNVAFWLALGLISAWLFRRKSEGQYHA >Mature_233_residues MIKRIAQTAGFTGLLAALLLTLLQSFWVSPLILQAETFEKAEPVAEVHEHAAGTAAHTHDAEAWEPEDGWQRVVSTTGGN LVVAVGFALMLAGLYTLRAPTKTSQGLLWGLAGYATFVLAPTMGLPPELPGTAAADLASRQMWWIGTAASTAVGLALIAF SRHWLMKTLGVAILAVPHVIGAPQPEVHSMLAPEALEAQFKIASQLTNVAFWLALGLISAWLFRRKSEGQYHA
Specific function: Unknown
COG id: COG5446
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24898; Mature: 24898
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRIAQTAGFTGLLAALLLTLLQSFWVSPLILQAETFEKAEPVAEVHEHAAGTAAHTHD CCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AEAWEPEDGWQRVVSTTGGNLVVAVGFALMLAGLYTLRAPTKTSQGLLWGLAGYATFVLA CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH PTMGLPPELPGTAAADLASRQMWWIGTAASTAVGLALIAFSRHWLMKTLGVAILAVPHVI CCCCCCCCCCCCHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAPQPEVHSMLAPEALEAQFKIASQLTNVAFWLALGLISAWLFRRKSEGQYHA CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIKRIAQTAGFTGLLAALLLTLLQSFWVSPLILQAETFEKAEPVAEVHEHAAGTAAHTHD CCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AEAWEPEDGWQRVVSTTGGNLVVAVGFALMLAGLYTLRAPTKTSQGLLWGLAGYATFVLA CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH PTMGLPPELPGTAAADLASRQMWWIGTAASTAVGLALIAFSRHWLMKTLGVAILAVPHVI CCCCCCCCCCCCHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAPQPEVHSMLAPEALEAQFKIASQLTNVAFWLALGLISAWLFRRKSEGQYHA CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA