| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459271
Identifier: 77459271
GI number: 77459271
Start: 3490990
End: 3491976
Strand: Reverse
Name: 77459271
Synonym: Pfl01_3049
Alternate gene names: NA
Gene position: 3491976-3490990 (Counterclockwise)
Preceding gene: 77459272
Following gene: 77459268
Centisome position: 54.24
GC content: 45.29
Gene sequence:
>987_bases TTGAACCTCACCAAGAAGGTACTCATGACTCAAAAAAAAACTCACGACCTTCATGATTTTATGCGCCAGATAAGCGTTGA AATGGCAGCAGAGTATGATCGCATCCAGAAGCGAGCTACCGAAGATCCAGGTACTGCGGGAGATCAGGGAGAGGAAAACT GGGCAGAGCTTCTTAGAGACTGGCTTCCGCGGAGCTACGAAGTGGTCACAAAAGGCCGAATCATCAGCCAAGAGGGTGAT ACAAGCCCACAAATTGATGTCCTTGTATTAAAAAGCTCATATCCGAAAAAGATGCTTAATAAGAAACTTTATTTGGCCGC TGGCGTGGCGGCAGCATTTGAGTGCAAGACCACTCTTAAGGCATCGCACATTTCTGATGCTATAAAGACATGCGTTAAGA TCAAAAGCTTCTATCAAAGCCGTATTGGGACACCATATAAAGAACTACACTCCCCTATAGTATATGGGCTATTAGCGCAC TCCCACTCATGGAAAAAAGAAAGTTCGACGCCACTAGATAATATACAGGTGAATCTATATGATTCTGACGCTGCGTCTGT ACAACATCCGAGGCAAAAACTAGATATATTATGCGTCGCGGATCTCGCAACCTGGACGTCGTCAGCAATGACATTCATTG GACCTCACCAGATTCCTGACTGGGAGTCGATGATTCAGAATTATGGCGTAAATGGCTCTGCGACGAGCGCGTATATAGGC CATGCATATTCACATGAGCAGCAGGTCGAACAATTCACCCCTATTGGAGTACTCATCTCATATCTTTCCCAAAAGCTGGC CTGGGAAGATCCTGCATTTCGCGATCTGGCTGATTATTACCGATTAACTAACATAGCTGGATCTGGAAGGGGACACATGA GGAAGTGGCCCGCCTCCATATATTCTGATGAGATTCGTTCTCGTGTCGAAAAGGGTATGCTATCAAACGGTAAATTATGG GACGAGTGGAGTATATACTTTGCATAA
Upstream 100 bases:
>100_bases TGCTGCATTATCAATATTAGTTTTTTGTGAAATGACCGCGCCATAGGAACTCACCCGGGGAATTATGCGCTAATTGATGT CTCCTTAACGTTATCTCTAC
Downstream 100 bases:
>100_bases GATGGCTAGCACCCGACTCAAATAGTTGGTGATTCGCCCCGACTGCTTTATAGGCATTCAAGTTTTATAGGATAGCTGCG AACCCCTGTGTAACTTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MNLTKKVLMTQKKTHDLHDFMRQISVEMAAEYDRIQKRATEDPGTAGDQGEENWAELLRDWLPRSYEVVTKGRIISQEGD TSPQIDVLVLKSSYPKKMLNKKLYLAAGVAAAFECKTTLKASHISDAIKTCVKIKSFYQSRIGTPYKELHSPIVYGLLAH SHSWKKESSTPLDNIQVNLYDSDAASVQHPRQKLDILCVADLATWTSSAMTFIGPHQIPDWESMIQNYGVNGSATSAYIG HAYSHEQQVEQFTPIGVLISYLSQKLAWEDPAFRDLADYYRLTNIAGSGRGHMRKWPASIYSDEIRSRVEKGMLSNGKLW DEWSIYFA
Sequences:
>Translated_328_residues MNLTKKVLMTQKKTHDLHDFMRQISVEMAAEYDRIQKRATEDPGTAGDQGEENWAELLRDWLPRSYEVVTKGRIISQEGD TSPQIDVLVLKSSYPKKMLNKKLYLAAGVAAAFECKTTLKASHISDAIKTCVKIKSFYQSRIGTPYKELHSPIVYGLLAH SHSWKKESSTPLDNIQVNLYDSDAASVQHPRQKLDILCVADLATWTSSAMTFIGPHQIPDWESMIQNYGVNGSATSAYIG HAYSHEQQVEQFTPIGVLISYLSQKLAWEDPAFRDLADYYRLTNIAGSGRGHMRKWPASIYSDEIRSRVEKGMLSNGKLW DEWSIYFA >Mature_328_residues MNLTKKVLMTQKKTHDLHDFMRQISVEMAAEYDRIQKRATEDPGTAGDQGEENWAELLRDWLPRSYEVVTKGRIISQEGD TSPQIDVLVLKSSYPKKMLNKKLYLAAGVAAAFECKTTLKASHISDAIKTCVKIKSFYQSRIGTPYKELHSPIVYGLLAH SHSWKKESSTPLDNIQVNLYDSDAASVQHPRQKLDILCVADLATWTSSAMTFIGPHQIPDWESMIQNYGVNGSATSAYIG HAYSHEQQVEQFTPIGVLISYLSQKLAWEDPAFRDLADYYRLTNIAGSGRGHMRKWPASIYSDEIRSRVEKGMLSNGKLW DEWSIYFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37159; Mature: 37159
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLTKKVLMTQKKTHDLHDFMRQISVEMAAEYDRIQKRATEDPGTAGDQGEENWAELLRD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH WLPRSYEVVTKGRIISQEGDTSPQIDVLVLKSSYPKKMLNKKLYLAAGVAAAFECKTTLK HCCCCEEEHCCCEEEECCCCCCCCEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHH ASHISDAIKTCVKIKSFYQSRIGTPYKELHSPIVYGLLAHSHSWKKESSTPLDNIQVNLY HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE DSDAASVQHPRQKLDILCVADLATWTSSAMTFIGPHQIPDWESMIQNYGVNGSATSAYIG CCCHHHHHCHHHHHCCCEEHHHHHHHHCCHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHH HAYSHEQQVEQFTPIGVLISYLSQKLAWEDPAFRDLADYYRLTNIAGSGRGHMRKWPASI HHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCHHH YSDEIRSRVEKGMLSNGKLWDEWSIYFA HHHHHHHHHHHCCCCCCCCCCCCEEEEC >Mature Secondary Structure MNLTKKVLMTQKKTHDLHDFMRQISVEMAAEYDRIQKRATEDPGTAGDQGEENWAELLRD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH WLPRSYEVVTKGRIISQEGDTSPQIDVLVLKSSYPKKMLNKKLYLAAGVAAAFECKTTLK HCCCCEEEHCCCEEEECCCCCCCCEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHH ASHISDAIKTCVKIKSFYQSRIGTPYKELHSPIVYGLLAHSHSWKKESSTPLDNIQVNLY HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE DSDAASVQHPRQKLDILCVADLATWTSSAMTFIGPHQIPDWESMIQNYGVNGSATSAYIG CCCHHHHHCHHHHHCCCEEHHHHHHHHCCHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHH HAYSHEQQVEQFTPIGVLISYLSQKLAWEDPAFRDLADYYRLTNIAGSGRGHMRKWPASI HHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCHHH YSDEIRSRVEKGMLSNGKLWDEWSIYFA HHHHHHHHHHHCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA