| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77459230
Identifier: 77459230
GI number: 77459230
Start: 3448305
End: 3448976
Strand: Direct
Name: 77459230
Synonym: Pfl01_3008
Alternate gene names: NA
Gene position: 3448305-3448976 (Clockwise)
Preceding gene: 77459229
Following gene: 77459231
Centisome position: 53.56
GC content: 59.08
Gene sequence:
>672_bases ATGAAAGCCTCGACGTTTCAAACCCTCATTATTGGATTGCTTTGCCTGGCGGCCGCCGGGCTAAGTGGTGGATTGTATAA CCAGTATCAGCGCGTGGCGGAACTACAGAGCACGAACACGCAATACCGACAAACCCTGGATACCCTGCAACGTGATTCAA GCGCCCTCAAGGACACCCAGGAGAAGCTGCAGTACGCGCTGAAAGATCTGAAACAGATGGTCGATACCGGCGAGCAACAG GCCAATACCCTCGATCCGATGTTGGATCAGTGGGCGCAAGAAATACAGGAACTGCGCGACGGTCTGGCAGCCCGCGCCAC CGTGGCAGACCTGACAGCGCTACGCGCACGCCTTGAGCACGTCGAGCAGCAGCTCCTGGGGCTCAAAACTCTGTCATCAA CTCCACCACCGACGTCTCCCGCGACCAAGCTGAAAAAGACCATTCGCCCCAAGCCCGCCCCGCTCTCGCCACCGTTCTCG GTGTTGAGTGTCGAGTCCCGTGGTGGTGAGCGTTTTCTGGCGGTCGCACCTCATGACAGTCGCTCTCTCACGGATGTCCG GCTGCTACATAGCGGTGAGCAACTGGGGGCCTGGCACCTAAAAGTACTGGAGCCGAACTCAGCCGTCTTCGCGGTGGCCA CTCAGCCAGACCAGGCCGTGCAAGTCCCTTGA
Upstream 100 bases:
>100_bases CCGATGAAGTCAGCCGTTCGGTCTGCTTCGAACAGCAGAAAACGGAGGCCGGCGTCGTGCGGGCCACACCAAGCTCATCC CATCAGGCGGAGGCACGTCC
Downstream 100 bases:
>100_bases GAAGCGATCATGAACAAAGCGTCACTACTCCCCGTCGCCTGCCTGGTTTCGCTACTGACCACAGGTGCTGCGATGGGTAA CCCCGTCACGACACAGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MKASTFQTLIIGLLCLAAAGLSGGLYNQYQRVAELQSTNTQYRQTLDTLQRDSSALKDTQEKLQYALKDLKQMVDTGEQQ ANTLDPMLDQWAQEIQELRDGLAARATVADLTALRARLEHVEQQLLGLKTLSSTPPPTSPATKLKKTIRPKPAPLSPPFS VLSVESRGGERFLAVAPHDSRSLTDVRLLHSGEQLGAWHLKVLEPNSAVFAVATQPDQAVQVP
Sequences:
>Translated_223_residues MKASTFQTLIIGLLCLAAAGLSGGLYNQYQRVAELQSTNTQYRQTLDTLQRDSSALKDTQEKLQYALKDLKQMVDTGEQQ ANTLDPMLDQWAQEIQELRDGLAARATVADLTALRARLEHVEQQLLGLKTLSSTPPPTSPATKLKKTIRPKPAPLSPPFS VLSVESRGGERFLAVAPHDSRSLTDVRLLHSGEQLGAWHLKVLEPNSAVFAVATQPDQAVQVP >Mature_223_residues MKASTFQTLIIGLLCLAAAGLSGGLYNQYQRVAELQSTNTQYRQTLDTLQRDSSALKDTQEKLQYALKDLKQMVDTGEQQ ANTLDPMLDQWAQEIQELRDGLAARATVADLTALRARLEHVEQQLLGLKTLSSTPPPTSPATKLKKTIRPKPAPLSPPFS VLSVESRGGERFLAVAPHDSRSLTDVRLLHSGEQLGAWHLKVLEPNSAVFAVATQPDQAVQVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24405; Mature: 24405
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASTFQTLIIGLLCLAAAGLSGGLYNQYQRVAELQSTNTQYRQTLDTLQRDSSALKDTQ CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EKLQYALKDLKQMVDTGEQQANTLDPMLDQWAQEIQELRDGLAARATVADLTALRARLEH HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEQQLLGLKTLSSTPPPTSPATKLKKTIRPKPAPLSPPFSVLSVESRGGERFLAVAPHDS HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCHHEEEEECCCCCEEEEECCCCC RSLTDVRLLHSGEQLGAWHLKVLEPNSAVFAVATQPDQAVQVP CCHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MKASTFQTLIIGLLCLAAAGLSGGLYNQYQRVAELQSTNTQYRQTLDTLQRDSSALKDTQ CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EKLQYALKDLKQMVDTGEQQANTLDPMLDQWAQEIQELRDGLAARATVADLTALRARLEH HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEQQLLGLKTLSSTPPPTSPATKLKKTIRPKPAPLSPPFSVLSVESRGGERFLAVAPHDS HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCHHEEEEECCCCCEEEEECCCCC RSLTDVRLLHSGEQLGAWHLKVLEPNSAVFAVATQPDQAVQVP CCHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA