| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459219
Identifier: 77459219
GI number: 77459219
Start: 3439114
End: 3440304
Strand: Direct
Name: 77459219
Synonym: Pfl01_2997
Alternate gene names: NA
Gene position: 3439114-3440304 (Clockwise)
Preceding gene: 77459218
Following gene: 77459220
Centisome position: 53.42
GC content: 60.2
Gene sequence:
>1191_bases ATGAACGCCGCCCCGTTCAATCGCTGGCAGCGTGTCCTGCAGCAATGCACCCAGCAGCTGAGTGAACGCTGGCCCGAACG CCCTGCCACTGAACATCCCTCCAACCAGGCCCTGCAAGCTGGCTTTCTGTTCAGTGGTCAAGCTCACGAAGTCGTGCCAC GTCGGCTGCTGTTGGATTGTCGGTTGACGCCGTTGGAGCGTAATGCCTGGCAAGTGTTTCGGCTCATGCTGCAAGGCCAG GGCGTGGTTACGCCGCGCTATGAAGATTTGCAGCCTTACCTGTCGAACGTGCCCTACGGTGCATTAGCCTCCCGTGAAAC CATCGCCCGCGTGTTGACGATGCTCAGACTAACTCGTTGGCTCAGCTTGGTGAGTCGCGGACGCCACCCGCTCAGTGGAC GTCTTCAAGGTTCACTGTATGTTCTGCACGATGAGCCGTTAACTCCTGCCGAAGCCATGGAGCTGGATCAGGATTACCTG GAGCTGGTCGGACATGCCCTGGGTCATGCGGTGAAGGCTGTACGCATTGTCGCTCAGCACATTGTGGAGGAAGTCCGCCT GGATAAGAATATCGAGCGGGATGTGTTACCGACGCGACTCGACAGTTGGGGCGAACACTGGACGCAGCAAGGACTGGATC AGCCGGCCGATGATGCCTTCCACGATTCCGAACTAGGGGCAAATCACCGCGTTCGGAATCGTGCAGGCCCTGGTTCGGAT TCCGAACCAGGCTTGAACGCCAGCGTTTCCGGCACCGTTCGGAATCCGAACGCCGCCTGTACTGTATTAAAAGAAAGTAC TTGTACTGTACCGCGCGCGACCCCGGCGGTGGATAACCTGCACTGGCCCGATCCGCTGCACCTGAGCCCAAGCGAACGTC AGGTCATCGCTGTGGCGCTGAACAAGCTCAAACCCGCGGATCGTCAGGCGGTGCTCAACGAAGCGGGGGCACGCTGTGCG GCCGGTGGAATCCGCAAGCCAGCGGCGTATCTGATGGGCCTGATCCAGCGTGCGCTGAAAGGTGACTTTCGTCCTTGGGC AGGTCAGGCGGAACCGTCACCCATTGCAGAATCGCCCGCACCACCACCCTCGCGCCCCATTCGAAAACAGGGCGAACCCG TGTCTGCCCTTGCTCAAGCGTGCCTGAATGAGCTGCGCCAACTGCGCGGCAAACGCGGTGGACGTCAGTAG
Upstream 100 bases:
>100_bases GCACCGGCGATCAGCTCGACGCGATGATGATGCTGGCCGAAGAGCAGCAGATCAGCCTGACCATCGTCTGGCAGCAGATT GACCAGTACAGCAACGGCAC
Downstream 100 bases:
>100_bases ATTTGATGCCACTGGCATCAAATCCATGGAGTTCCACTGTGCGAACACGTCGTACCAAACTATGAAACTCTTAGGGAAAA GCCCGGTCCACCCTTCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MNAAPFNRWQRVLQQCTQQLSERWPERPATEHPSNQALQAGFLFSGQAHEVVPRRLLLDCRLTPLERNAWQVFRLMLQGQ GVVTPRYEDLQPYLSNVPYGALASRETIARVLTMLRLTRWLSLVSRGRHPLSGRLQGSLYVLHDEPLTPAEAMELDQDYL ELVGHALGHAVKAVRIVAQHIVEEVRLDKNIERDVLPTRLDSWGEHWTQQGLDQPADDAFHDSELGANHRVRNRAGPGSD SEPGLNASVSGTVRNPNAACTVLKESTCTVPRATPAVDNLHWPDPLHLSPSERQVIAVALNKLKPADRQAVLNEAGARCA AGGIRKPAAYLMGLIQRALKGDFRPWAGQAEPSPIAESPAPPPSRPIRKQGEPVSALAQACLNELRQLRGKRGGRQ
Sequences:
>Translated_396_residues MNAAPFNRWQRVLQQCTQQLSERWPERPATEHPSNQALQAGFLFSGQAHEVVPRRLLLDCRLTPLERNAWQVFRLMLQGQ GVVTPRYEDLQPYLSNVPYGALASRETIARVLTMLRLTRWLSLVSRGRHPLSGRLQGSLYVLHDEPLTPAEAMELDQDYL ELVGHALGHAVKAVRIVAQHIVEEVRLDKNIERDVLPTRLDSWGEHWTQQGLDQPADDAFHDSELGANHRVRNRAGPGSD SEPGLNASVSGTVRNPNAACTVLKESTCTVPRATPAVDNLHWPDPLHLSPSERQVIAVALNKLKPADRQAVLNEAGARCA AGGIRKPAAYLMGLIQRALKGDFRPWAGQAEPSPIAESPAPPPSRPIRKQGEPVSALAQACLNELRQLRGKRGGRQ >Mature_396_residues MNAAPFNRWQRVLQQCTQQLSERWPERPATEHPSNQALQAGFLFSGQAHEVVPRRLLLDCRLTPLERNAWQVFRLMLQGQ GVVTPRYEDLQPYLSNVPYGALASRETIARVLTMLRLTRWLSLVSRGRHPLSGRLQGSLYVLHDEPLTPAEAMELDQDYL ELVGHALGHAVKAVRIVAQHIVEEVRLDKNIERDVLPTRLDSWGEHWTQQGLDQPADDAFHDSELGANHRVRNRAGPGSD SEPGLNASVSGTVRNPNAACTVLKESTCTVPRATPAVDNLHWPDPLHLSPSERQVIAVALNKLKPADRQAVLNEAGARCA AGGIRKPAAYLMGLIQRALKGDFRPWAGQAEPSPIAESPAPPPSRPIRKQGEPVSALAQACLNELRQLRGKRGGRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43838; Mature: 43838
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAPFNRWQRVLQQCTQQLSERWPERPATEHPSNQALQAGFLFSGQAHEVVPRRLLLDC CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCEECCCHHHHHHHHHHHHC RLTPLERNAWQVFRLMLQGQGVVTPRYEDLQPYLSNVPYGALASRETIARVLTMLRLTRW CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LSLVSRGRHPLSGRLQGSLYVLHDEPLTPAEAMELDQDYLELVGHALGHAVKAVRIVAQH HHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH IVEEVRLDKNIERDVLPTRLDSWGEHWTQQGLDQPADDAFHDSELGANHRVRNRAGPGSD HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHCCCCCCHHCCCCCCCC SEPGLNASVSGTVRNPNAACTVLKESTCTVPRATPAVDNLHWPDPLHLSPSERQVIAVAL CCCCCCCCCCCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH NKLKPADRQAVLNEAGARCAAGGIRKPAAYLMGLIQRALKGDFRPWAGQAEPSPIAESPA HHCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PPPSRPIRKQGEPVSALAQACLNELRQLRGKRGGRQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNAAPFNRWQRVLQQCTQQLSERWPERPATEHPSNQALQAGFLFSGQAHEVVPRRLLLDC CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCEECCCHHHHHHHHHHHHC RLTPLERNAWQVFRLMLQGQGVVTPRYEDLQPYLSNVPYGALASRETIARVLTMLRLTRW CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LSLVSRGRHPLSGRLQGSLYVLHDEPLTPAEAMELDQDYLELVGHALGHAVKAVRIVAQH HHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH IVEEVRLDKNIERDVLPTRLDSWGEHWTQQGLDQPADDAFHDSELGANHRVRNRAGPGSD HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHCCCCCCHHCCCCCCCC SEPGLNASVSGTVRNPNAACTVLKESTCTVPRATPAVDNLHWPDPLHLSPSERQVIAVAL CCCCCCCCCCCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH NKLKPADRQAVLNEAGARCAAGGIRKPAAYLMGLIQRALKGDFRPWAGQAEPSPIAESPA HHCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PPPSRPIRKQGEPVSALAQACLNELRQLRGKRGGRQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA