| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77459217
Identifier: 77459217
GI number: 77459217
Start: 3436986
End: 3438572
Strand: Direct
Name: 77459217
Synonym: Pfl01_2995
Alternate gene names: NA
Gene position: 3436986-3438572 (Clockwise)
Preceding gene: 77459216
Following gene: 77459218
Centisome position: 53.38
GC content: 57.4
Gene sequence:
>1587_bases ATGAAGAAGCTCAGTCAGGAGGAGATCACTGGCAAGCTGCACCAGGCCCATTTCCCCCGGGGTCAAGAATTGGAGCGACT GTCCGATCCAGTTACTGACACGCCTATGGTGATGACTCTGGAGCAACTGCGGCCCTACGAACACAACCCGCGTTTCATTC GTAATCCGCTGTACGACGATATCAAGGCTTCGATCCGTGAACGCGGGCTGGATCAACCTCCACCGATTACCCGCCGCCCG GGCGAAACCTATTTCATCATCCGCAACGGCGGCAATACGCGCTTGTCGATTCTCGGGGAGCTGTGGCAAGAAACCCGCGA TGAGCGTTTCTTCCGAATTCATTGCCTGTTCCGGCCTTGGACCAGTGAAATTACCGCCCTACTCGGCCATCTGGTCGAAA GTGATCTGCACGGTCAACTCACTTTCATTGAACGTGCTCTGGCCGTACTTAAACTCAAAACCATGCTCGAAGCAGGTGGT GCTGCGCTCTCACAACGTGAACTGGCGCGACGTCTTGCCGCTGGAGGCTACCCGATTTCACAGTCGCACATAAGCCGGAT GCTCGACACCCTCGAACACTTACTGCCCGCCATTCCACAAACCCTGTATGCCGGAGTGGGTAAGCCCCAGATCGAACGCC TGATCAGTCTGCGCAGTCAGGCCGAACGAACCTGGAACCGTTATTCAACCGCCTCCGTTGCATTCGCCGAATTCTGGCTC GAAACCCTGGCCGGCTTCGACGCCGATCCTGAATCATTCAATCTTGAGCGGATCCAGGATGAGCTGCTCGAACGCATGAG CCACTTGCTCGGACAGTCCTACCGTATGTTAGCCCTGGAGCTGAGCGAAACCCAACGGGTCATCTCGACGCCTAGCGTTA TCGTCACCCCCCCCTCGGAGAACAACCATCTGCCGAGCGTTGATGAAGCCACGGCAGGACCGCCCTCCTCCGAGTCCCAT CCCAAATCAACTGAGACCAGAACCCAGACCGAAACAGCGCGAGAGGAGCTGCTCACAACGCCCGAAACGAATGTCATATC AACGGTCAGCCCTCCGTCACGCGTTCAACAGATTCGCGAGCAGATTGATCGCGAAACCGCCACCGAAACAGCACCGAGCG TCGAGGGCTGCACGACCAACGACCTCTGGACCATTGCACCAGCACTGGATTGCCCCGAACAACTGCGTTTTGCCGTTGCC CAGCTGGCTCGGGAAATGGCCTCTTATGCAGGAGATCCCGAAAGCGTCATCGATCAACCGCACGGCCTGGGCTTCACTCT GGATATCGAGCGGCTTGATCTTGCCGCGTCCCGCTCGACAGGAATTCACCTACTGCTCCTGGCCCTGTTACGCGCTCAAG ACGACGTGAACTGGGAGGATCGCAAACTGTTACCCTCGGCTTTGTTCGGCCAGTTGTTACTGGGGGTCTACCAACTCCCA CTACCGGATCGTCCGACCGTGGATGTGGGACTGGAACGACTGCCCGACCTTGTGCTCATCAAGCTGTATCGTCTCATTCG CCTGGCCCGTCGCCTAATCGATTTAACGCTTTTCCCTGCAGACAACGCACCGGAGGACCTGCCATGA
Upstream 100 bases:
>100_bases CAGAACTTTCCCAACATTTCGAAGGTTCGGGGACTGTCGAGATCGTCAAGTTCGAGGTCGGTGACCATTTGCGCAATCGA CGTTAACTGAGGCAGTTCAA
Downstream 100 bases:
>100_bases GTCTGTCCTTCAATGTGCTAAACCAGGCCATGCTGACCCAAATACTGCATGAGTTGCGTCAGGGTAATCTGCAGCGCTGC AAGGCTCTCGGGCTGGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MKKLSQEEITGKLHQAHFPRGQELERLSDPVTDTPMVMTLEQLRPYEHNPRFIRNPLYDDIKASIRERGLDQPPPITRRP GETYFIIRNGGNTRLSILGELWQETRDERFFRIHCLFRPWTSEITALLGHLVESDLHGQLTFIERALAVLKLKTMLEAGG AALSQRELARRLAAGGYPISQSHISRMLDTLEHLLPAIPQTLYAGVGKPQIERLISLRSQAERTWNRYSTASVAFAEFWL ETLAGFDADPESFNLERIQDELLERMSHLLGQSYRMLALELSETQRVISTPSVIVTPPSENNHLPSVDEATAGPPSSESH PKSTETRTQTETAREELLTTPETNVISTVSPPSRVQQIREQIDRETATETAPSVEGCTTNDLWTIAPALDCPEQLRFAVA QLAREMASYAGDPESVIDQPHGLGFTLDIERLDLAASRSTGIHLLLLALLRAQDDVNWEDRKLLPSALFGQLLLGVYQLP LPDRPTVDVGLERLPDLVLIKLYRLIRLARRLIDLTLFPADNAPEDLP
Sequences:
>Translated_528_residues MKKLSQEEITGKLHQAHFPRGQELERLSDPVTDTPMVMTLEQLRPYEHNPRFIRNPLYDDIKASIRERGLDQPPPITRRP GETYFIIRNGGNTRLSILGELWQETRDERFFRIHCLFRPWTSEITALLGHLVESDLHGQLTFIERALAVLKLKTMLEAGG AALSQRELARRLAAGGYPISQSHISRMLDTLEHLLPAIPQTLYAGVGKPQIERLISLRSQAERTWNRYSTASVAFAEFWL ETLAGFDADPESFNLERIQDELLERMSHLLGQSYRMLALELSETQRVISTPSVIVTPPSENNHLPSVDEATAGPPSSESH PKSTETRTQTETAREELLTTPETNVISTVSPPSRVQQIREQIDRETATETAPSVEGCTTNDLWTIAPALDCPEQLRFAVA QLAREMASYAGDPESVIDQPHGLGFTLDIERLDLAASRSTGIHLLLLALLRAQDDVNWEDRKLLPSALFGQLLLGVYQLP LPDRPTVDVGLERLPDLVLIKLYRLIRLARRLIDLTLFPADNAPEDLP >Mature_528_residues MKKLSQEEITGKLHQAHFPRGQELERLSDPVTDTPMVMTLEQLRPYEHNPRFIRNPLYDDIKASIRERGLDQPPPITRRP GETYFIIRNGGNTRLSILGELWQETRDERFFRIHCLFRPWTSEITALLGHLVESDLHGQLTFIERALAVLKLKTMLEAGG AALSQRELARRLAAGGYPISQSHISRMLDTLEHLLPAIPQTLYAGVGKPQIERLISLRSQAERTWNRYSTASVAFAEFWL ETLAGFDADPESFNLERIQDELLERMSHLLGQSYRMLALELSETQRVISTPSVIVTPPSENNHLPSVDEATAGPPSSESH PKSTETRTQTETAREELLTTPETNVISTVSPPSRVQQIREQIDRETATETAPSVEGCTTNDLWTIAPALDCPEQLRFAVA QLAREMASYAGDPESVIDQPHGLGFTLDIERLDLAASRSTGIHLLLLALLRAQDDVNWEDRKLLPSALFGQLLLGVYQLP LPDRPTVDVGLERLPDLVLIKLYRLIRLARRLIDLTLFPADNAPEDLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59444; Mature: 59444
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSQEEITGKLHQAHFPRGQELERLSDPVTDTPMVMTLEQLRPYEHNPRFIRNPLYDD CCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHCCCCHHH IKASIRERGLDQPPPITRRPGETYFIIRNGGNTRLSILGELWQETRDERFFRIHCLFRPW HHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCH TSEITALLGHLVESDLHGQLTFIERALAVLKLKTMLEAGGAALSQRELARRLAAGGYPIS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC QSHISRMLDTLEHLLPAIPQTLYAGVGKPQIERLISLRSQAERTWNRYSTASVAFAEFWL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETLAGFDADPESFNLERIQDELLERMSHLLGQSYRMLALELSETQRVISTPSVIVTPPSE HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCC NNHLPSVDEATAGPPSSESHPKSTETRTQTETAREELLTTPETNVISTVSPPSRVQQIRE CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHH QIDRETATETAPSVEGCTTNDLWTIAPALDCPEQLRFAVAQLAREMASYAGDPESVIDQP HHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCC HGLGFTLDIERLDLAASRSTGIHLLLLALLRAQDDVNWEDRKLLPSALFGQLLLGVYQLP CCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC LPDRPTVDVGLERLPDLVLIKLYRLIRLARRLIDLTLFPADNAPEDLP CCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC >Mature Secondary Structure MKKLSQEEITGKLHQAHFPRGQELERLSDPVTDTPMVMTLEQLRPYEHNPRFIRNPLYDD CCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHCCCCHHH IKASIRERGLDQPPPITRRPGETYFIIRNGGNTRLSILGELWQETRDERFFRIHCLFRPW HHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCH TSEITALLGHLVESDLHGQLTFIERALAVLKLKTMLEAGGAALSQRELARRLAAGGYPIS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC QSHISRMLDTLEHLLPAIPQTLYAGVGKPQIERLISLRSQAERTWNRYSTASVAFAEFWL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETLAGFDADPESFNLERIQDELLERMSHLLGQSYRMLALELSETQRVISTPSVIVTPPSE HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCC NNHLPSVDEATAGPPSSESHPKSTETRTQTETAREELLTTPETNVISTVSPPSRVQQIRE CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHH QIDRETATETAPSVEGCTTNDLWTIAPALDCPEQLRFAVAQLAREMASYAGDPESVIDQP HHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCC HGLGFTLDIERLDLAASRSTGIHLLLLALLRAQDDVNWEDRKLLPSALFGQLLLGVYQLP CCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC LPDRPTVDVGLERLPDLVLIKLYRLIRLARRLIDLTLFPADNAPEDLP CCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA