| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77459173
Identifier: 77459173
GI number: 77459173
Start: 3389408
End: 3389701
Strand: Direct
Name: 77459173
Synonym: Pfl01_2948
Alternate gene names: NA
Gene position: 3389408-3389701 (Clockwise)
Preceding gene: 77459172
Following gene: 77459175
Centisome position: 52.64
GC content: 59.86
Gene sequence:
>294_bases TTGGTCGTGAGAGGTCAATACCTTTACACGTCACCAAGGAGGCGTCTTATGGTCATTCATTTCAAAGTCGACGGGCACCT GGCCTGCGGGCACAAGGGCAACAACCTCTCCGCCAGCAGCGAACTCAATCGAGTGAAGTGCCGCAGTTGCCGCAATACTG ACGCGTACAAGGATGCAGCGCAACGCAGCGCGGCGCGCGGCTCGCCATTCAAAGGATGCGCACACGGCGTCCGACTGGCG TTCCGAGTGGATCGAGCGGTTGACCGCGATGGCCGGACTTCAGCGTTTGCCTAG
Upstream 100 bases:
>100_bases CCGCTGATTCGCAGCACCCTGTCATCGCTCAAACCGATCGACCGGCCGTTGCCACGTTTCAGGTAGGTCATCGATCCACG GTGCACGAAAAAGAACGCCC
Downstream 100 bases:
>100_bases AGGATTTACTGGGCAAGCCTTCGTCTGAACAAAAAAAGGGCCGATTGAATCGGCCTTTTTTTTGCTGTTCGCTGAATGCC GTTACGATTCAGGCCCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MVVRGQYLYTSPRRRLMVIHFKVDGHLACGHKGNNLSASSELNRVKCRSCRNTDAYKDAAQRSAARGSPFKGCAHGVRLA FRVDRAVDRDGRTSAFA
Sequences:
>Translated_97_residues MVVRGQYLYTSPRRRLMVIHFKVDGHLACGHKGNNLSASSELNRVKCRSCRNTDAYKDAAQRSAARGSPFKGCAHGVRLA FRVDRAVDRDGRTSAFA >Mature_97_residues MVVRGQYLYTSPRRRLMVIHFKVDGHLACGHKGNNLSASSELNRVKCRSCRNTDAYKDAAQRSAARGSPFKGCAHGVRLA FRVDRAVDRDGRTSAFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10768; Mature: 10768
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVRGQYLYTSPRRRLMVIHFKVDGHLACGHKGNNLSASSELNRVKCRSCRNTDAYKDAA CEECCCEEEECCCCEEEEEEEEECCEEECCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHH QRSAARGSPFKGCAHGVRLAFRVDRAVDRDGRTSAFA HHHHCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MVVRGQYLYTSPRRRLMVIHFKVDGHLACGHKGNNLSASSELNRVKCRSCRNTDAYKDAA CEECCCEEEECCCCEEEEEEEEECCEEECCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHH QRSAARGSPFKGCAHGVRLAFRVDRAVDRDGRTSAFA HHHHCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA