| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459161
Identifier: 77459161
GI number: 77459161
Start: 3378343
End: 3379056
Strand: Direct
Name: 77459161
Synonym: Pfl01_2936
Alternate gene names: NA
Gene position: 3378343-3379056 (Clockwise)
Preceding gene: 77459160
Following gene: 77459162
Centisome position: 52.47
GC content: 61.48
Gene sequence:
>714_bases ATGTCACCCTCACCCGCCTCCCCGCTCGATGCGCTCGACTGGATCGGCCTGGAGCAGCAACTGGATCAGGACGGCTGTGC CGTCATTCGCACGCTGCTGCGCCCGGACACCTGTGATCGATTGAGTGCGCTTTACCCGCAAAGTGAACCGTTTCGATCCC AGGTCATCATGGCCCGCCACGGTTTCGGGCGCGGAGAATACAAATACCTGCGCTATCCGCTTCCCCCCGTGGTGGAACGC CTGCGCAGCGCGCTTTACCCGCGACTCGTGCCTCTGGCCAACCGCTGGCATGAACGAATGGGCCTGCCAGCGCGCTTTCC AGAGCAACACAGCGAATTTCTCGCGCGCTGTCACGCCGCCGGTCAACTGCGACCTACCCCGCTCTTGCTGCAATACGGCC CGCAGGACTACAACTGCCTGCATCAGGACCTGTACGGTGAACATGTCTTTCCACTGCAAGTGGCGATTCTTCTGTCAGAA CCTGGCGAAGACTTCACCGGCGGTGAGTTCGTTTTGACTGAACAGCGTCCGAGAATGCAGTCCCGCCCACTGGTGATGGA CCTGAGAAAAGGCGACGCGCTGATCTTTGCCGTCAACCAGCGCCCGGTCAAAGGCGTGCGCGGCGACTATCGGGTGACCA TGCGCCACGGCGTCAGCCGACTGCACAGCGGAACACGGCATACTCTGGGCATCATTTTCCACGACGCGACCTGA
Upstream 100 bases:
>100_bases GCCCTGTAAAACTCGGGTGACAATTCAACCGCAAGCGGCGGAGTGTTGCAGCCGGGTGGACGGCTCAGACTGATACCTGA ATGTGAGCCAAGGAATCAGC
Downstream 100 bases:
>100_bases CGATCATGCAAACCACCTTCGACCTGTTCGCCGACACAGAATCCGAACAACCTCGGCGCGCCGAACAGATCGGCGAGCAA TCCTGGGTGCTGCGCGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MSPSPASPLDALDWIGLEQQLDQDGCAVIRTLLRPDTCDRLSALYPQSEPFRSQVIMARHGFGRGEYKYLRYPLPPVVER LRSALYPRLVPLANRWHERMGLPARFPEQHSEFLARCHAAGQLRPTPLLLQYGPQDYNCLHQDLYGEHVFPLQVAILLSE PGEDFTGGEFVLTEQRPRMQSRPLVMDLRKGDALIFAVNQRPVKGVRGDYRVTMRHGVSRLHSGTRHTLGIIFHDAT
Sequences:
>Translated_237_residues MSPSPASPLDALDWIGLEQQLDQDGCAVIRTLLRPDTCDRLSALYPQSEPFRSQVIMARHGFGRGEYKYLRYPLPPVVER LRSALYPRLVPLANRWHERMGLPARFPEQHSEFLARCHAAGQLRPTPLLLQYGPQDYNCLHQDLYGEHVFPLQVAILLSE PGEDFTGGEFVLTEQRPRMQSRPLVMDLRKGDALIFAVNQRPVKGVRGDYRVTMRHGVSRLHSGTRHTLGIIFHDAT >Mature_236_residues SPSPASPLDALDWIGLEQQLDQDGCAVIRTLLRPDTCDRLSALYPQSEPFRSQVIMARHGFGRGEYKYLRYPLPPVVERL RSALYPRLVPLANRWHERMGLPARFPEQHSEFLARCHAAGQLRPTPLLLQYGPQDYNCLHQDLYGEHVFPLQVAILLSEP GEDFTGGEFVLTEQRPRMQSRPLVMDLRKGDALIFAVNQRPVKGVRGDYRVTMRHGVSRLHSGTRHTLGIIFHDAT
Specific function: Unknown
COG id: COG3826
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018655 [H]
Pfam domain/function: PF09859 DUF2086 [H]
EC number: NA
Molecular weight: Translated: 27001; Mature: 26870
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSPASPLDALDWIGLEQQLDQDGCAVIRTLLRPDTCDRLSALYPQSEPFRSQVIMARH CCCCCCCCCHHHHHCCCHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHC GFGRGEYKYLRYPLPPVVERLRSALYPRLVPLANRWHERMGLPARFPEQHSEFLARCHAA CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC GQLRPTPLLLQYGPQDYNCLHQDLYGEHVFPLQVAILLSEPGEDFTGGEFVLTEQRPRMQ CCCCCCCEEEEECCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCC SRPLVMDLRKGDALIFAVNQRPVKGVRGDYRVTMRHGVSRLHSGTRHTLGIIFHDAT CCCEEEEECCCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEEEECCC >Mature Secondary Structure SPSPASPLDALDWIGLEQQLDQDGCAVIRTLLRPDTCDRLSALYPQSEPFRSQVIMARH CCCCCCCCHHHHHCCCHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHC GFGRGEYKYLRYPLPPVVERLRSALYPRLVPLANRWHERMGLPARFPEQHSEFLARCHAA CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC GQLRPTPLLLQYGPQDYNCLHQDLYGEHVFPLQVAILLSEPGEDFTGGEFVLTEQRPRMQ CCCCCCCEEEEECCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCC SRPLVMDLRKGDALIFAVNQRPVKGVRGDYRVTMRHGVSRLHSGTRHTLGIIFHDAT CCCEEEEECCCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]