Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77459161

Identifier: 77459161

GI number: 77459161

Start: 3378343

End: 3379056

Strand: Direct

Name: 77459161

Synonym: Pfl01_2936

Alternate gene names: NA

Gene position: 3378343-3379056 (Clockwise)

Preceding gene: 77459160

Following gene: 77459162

Centisome position: 52.47

GC content: 61.48

Gene sequence:

>714_bases
ATGTCACCCTCACCCGCCTCCCCGCTCGATGCGCTCGACTGGATCGGCCTGGAGCAGCAACTGGATCAGGACGGCTGTGC
CGTCATTCGCACGCTGCTGCGCCCGGACACCTGTGATCGATTGAGTGCGCTTTACCCGCAAAGTGAACCGTTTCGATCCC
AGGTCATCATGGCCCGCCACGGTTTCGGGCGCGGAGAATACAAATACCTGCGCTATCCGCTTCCCCCCGTGGTGGAACGC
CTGCGCAGCGCGCTTTACCCGCGACTCGTGCCTCTGGCCAACCGCTGGCATGAACGAATGGGCCTGCCAGCGCGCTTTCC
AGAGCAACACAGCGAATTTCTCGCGCGCTGTCACGCCGCCGGTCAACTGCGACCTACCCCGCTCTTGCTGCAATACGGCC
CGCAGGACTACAACTGCCTGCATCAGGACCTGTACGGTGAACATGTCTTTCCACTGCAAGTGGCGATTCTTCTGTCAGAA
CCTGGCGAAGACTTCACCGGCGGTGAGTTCGTTTTGACTGAACAGCGTCCGAGAATGCAGTCCCGCCCACTGGTGATGGA
CCTGAGAAAAGGCGACGCGCTGATCTTTGCCGTCAACCAGCGCCCGGTCAAAGGCGTGCGCGGCGACTATCGGGTGACCA
TGCGCCACGGCGTCAGCCGACTGCACAGCGGAACACGGCATACTCTGGGCATCATTTTCCACGACGCGACCTGA

Upstream 100 bases:

>100_bases
GCCCTGTAAAACTCGGGTGACAATTCAACCGCAAGCGGCGGAGTGTTGCAGCCGGGTGGACGGCTCAGACTGATACCTGA
ATGTGAGCCAAGGAATCAGC

Downstream 100 bases:

>100_bases
CGATCATGCAAACCACCTTCGACCTGTTCGCCGACACAGAATCCGAACAACCTCGGCGCGCCGAACAGATCGGCGAGCAA
TCCTGGGTGCTGCGCGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MSPSPASPLDALDWIGLEQQLDQDGCAVIRTLLRPDTCDRLSALYPQSEPFRSQVIMARHGFGRGEYKYLRYPLPPVVER
LRSALYPRLVPLANRWHERMGLPARFPEQHSEFLARCHAAGQLRPTPLLLQYGPQDYNCLHQDLYGEHVFPLQVAILLSE
PGEDFTGGEFVLTEQRPRMQSRPLVMDLRKGDALIFAVNQRPVKGVRGDYRVTMRHGVSRLHSGTRHTLGIIFHDAT

Sequences:

>Translated_237_residues
MSPSPASPLDALDWIGLEQQLDQDGCAVIRTLLRPDTCDRLSALYPQSEPFRSQVIMARHGFGRGEYKYLRYPLPPVVER
LRSALYPRLVPLANRWHERMGLPARFPEQHSEFLARCHAAGQLRPTPLLLQYGPQDYNCLHQDLYGEHVFPLQVAILLSE
PGEDFTGGEFVLTEQRPRMQSRPLVMDLRKGDALIFAVNQRPVKGVRGDYRVTMRHGVSRLHSGTRHTLGIIFHDAT
>Mature_236_residues
SPSPASPLDALDWIGLEQQLDQDGCAVIRTLLRPDTCDRLSALYPQSEPFRSQVIMARHGFGRGEYKYLRYPLPPVVERL
RSALYPRLVPLANRWHERMGLPARFPEQHSEFLARCHAAGQLRPTPLLLQYGPQDYNCLHQDLYGEHVFPLQVAILLSEP
GEDFTGGEFVLTEQRPRMQSRPLVMDLRKGDALIFAVNQRPVKGVRGDYRVTMRHGVSRLHSGTRHTLGIIFHDAT

Specific function: Unknown

COG id: COG3826

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018655 [H]

Pfam domain/function: PF09859 DUF2086 [H]

EC number: NA

Molecular weight: Translated: 27001; Mature: 26870

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSPASPLDALDWIGLEQQLDQDGCAVIRTLLRPDTCDRLSALYPQSEPFRSQVIMARH
CCCCCCCCCHHHHHCCCHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHC
GFGRGEYKYLRYPLPPVVERLRSALYPRLVPLANRWHERMGLPARFPEQHSEFLARCHAA
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
GQLRPTPLLLQYGPQDYNCLHQDLYGEHVFPLQVAILLSEPGEDFTGGEFVLTEQRPRMQ
CCCCCCCEEEEECCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCC
SRPLVMDLRKGDALIFAVNQRPVKGVRGDYRVTMRHGVSRLHSGTRHTLGIIFHDAT
CCCEEEEECCCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEEEECCC
>Mature Secondary Structure 
SPSPASPLDALDWIGLEQQLDQDGCAVIRTLLRPDTCDRLSALYPQSEPFRSQVIMARH
CCCCCCCCHHHHHCCCHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHC
GFGRGEYKYLRYPLPPVVERLRSALYPRLVPLANRWHERMGLPARFPEQHSEFLARCHAA
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
GQLRPTPLLLQYGPQDYNCLHQDLYGEHVFPLQVAILLSEPGEDFTGGEFVLTEQRPRMQ
CCCCCCCEEEEECCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCC
SRPLVMDLRKGDALIFAVNQRPVKGVRGDYRVTMRHGVSRLHSGTRHTLGIIFHDAT
CCCEEEEECCCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]