| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459156
Identifier: 77459156
GI number: 77459156
Start: 3376574
End: 3376870
Strand: Direct
Name: 77459156
Synonym: Pfl01_2931
Alternate gene names: NA
Gene position: 3376574-3376870 (Clockwise)
Preceding gene: 77459155
Following gene: 77459159
Centisome position: 52.44
GC content: 60.27
Gene sequence:
>297_bases ATGATCAACCGCCCCATCATCAGCTTCCTGCCCCTTATTGCGCTCGCGGCCTTGGCCGGCTGCGCCACCTCGCAGACCAC CTACCTGAACAACGGCGAACAAGGGCTTAGCATCGACTGCTCCGGCGAAGCCAATTCCTGGGCCAGCTGTTATGAAAAGG CCGACGCGTCCTGTGCCGGAACCGGTTATCGGATCGTCGGGACTGACGGCACACCGGCGCCCAAGGAAGACGACAAGACG CTGGGCGTTGACGTCGGCAACTACAAAAACCGCAGCGTAGTGGTGGTGTGTAAATAG
Upstream 100 bases:
>100_bases TTTTTTTGGGCTGCGCACAAAGAAGTGGCCAATCGCTATAACCTTTTCATGCCAGCGCTGTCATAGCGTCTAGCCCCTCC TCCTCGAAGACGACATTGCC
Downstream 100 bases:
>100_bases CCTTACATGTGAATTTCGGCGAACTTGATCCCCAGCCCGCGCACGACCTCGATCAGGTCGTCGAGTCGGTTGAAGGACTC GACTTCGTCGTTATCGTCGA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MINRPIISFLPLIALAALAGCATSQTTYLNNGEQGLSIDCSGEANSWASCYEKADASCAGTGYRIVGTDGTPAPKEDDKT LGVDVGNYKNRSVVVVCK
Sequences:
>Translated_98_residues MINRPIISFLPLIALAALAGCATSQTTYLNNGEQGLSIDCSGEANSWASCYEKADASCAGTGYRIVGTDGTPAPKEDDKT LGVDVGNYKNRSVVVVCK >Mature_98_residues MINRPIISFLPLIALAALAGCATSQTTYLNNGEQGLSIDCSGEANSWASCYEKADASCAGTGYRIVGTDGTPAPKEDDKT LGVDVGNYKNRSVVVVCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10219; Mature: 10219
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINRPIISFLPLIALAALAGCATSQTTYLNNGEQGLSIDCSGEANSWASCYEKADASCAG CCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCHHHHHHHCCCCCCC TGYRIVGTDGTPAPKEDDKTLGVDVGNYKNRSVVVVCK CCEEEEECCCCCCCCCCCCEECEECCCCCCCEEEEEEC >Mature Secondary Structure MINRPIISFLPLIALAALAGCATSQTTYLNNGEQGLSIDCSGEANSWASCYEKADASCAG CCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCHHHHHHHCCCCCCC TGYRIVGTDGTPAPKEDDKTLGVDVGNYKNRSVVVVCK CCEEEEECCCCCCCCCCCCEECEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA