| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is lip2 [H]
Identifier: 77459088
GI number: 77459088
Start: 3302868
End: 3303722
Strand: Direct
Name: lip2 [H]
Synonym: Pfl01_2863
Alternate gene names: 77459088
Gene position: 3302868-3303722 (Clockwise)
Preceding gene: 77459087
Following gene: 77459089
Centisome position: 51.3
GC content: 60.0
Gene sequence:
>855_bases ATGGATGAAACTTCGTTGACTGTAGAGGACGCCAGAACGGCGTTGCGGCAGGCGCAAGTCACCTGTGTTCATGATCTGGC GATCGAGAGCCATGGCCGTTCACTGCCGCTGCGCCTCTACACACCACCCGGCAAGGGACCGTTTCCCGTGCTGGTTTTCT TTCATGGCGGGGGCTGGGTCACAGGAGACCTGGACACGCATGACGGGTTCTGTCGGTTGATGTGTGAGTGGGCTGGTTGC GCCGTGGTCGCCGTTGATTTCGCCCGCCCTCCGGAACACTTGTTTCCGGCAGCCCTGGAAGACTGTTGGACAGCTTTCAA GTGGGTGACACGGCAAGGCGCCGGTTGCGGACTGGATACTTCAAGCATTGCAGTCGCAGGAGGTGGTTCAGGAGGCGGGA TGGCCGCCGTCATCAGCCAGCGCGACGCCGAATGTGACGAACCATGCATCTGCTTTCAGCTGCTGCTTTACCCTTTGCTC GACTGCAACACTCGCCGCAGCTCCCACACGAGATTCGGGCAAGGACATGGACTGACTGTCGATCTGCTCGAATGGTACCT CGGTCACTACCTGCCGCCCGGTACATCGCGCGTGGACAGACGGCTGTCGCCCCTGCTCAGTGACTCGCTGCATGGACTGC CCCGAACGTTGATCATCACCTGCGGACTTGACGTTCTTCGTGATGAGGGACGTGCCTACGCCAAGCGATTGCGAGCAGCA AATGTCACTGTCGAACACAAAGAGTTTTCGGGGATGCGTCACGGTTTCATGAACTACCCTGCCGCCCATGAAGAGGCCAG ACGCGCCCTGCTGCTTTGCGCCCGGACCCTTCAGGCACAGCTTCGCGGCGAATGA
Upstream 100 bases:
>100_bases CATCCACCGACGACAATGTTGCTGGAAGTCTCTCGACTGGTCAGCCCTGAATACGTTATCGAGATCGAGGCAGAGGCCCG TTCGGGCAGAGGCTGCGGCC
Downstream 100 bases:
>100_bases TGGCCGGGACTGGAATCAACGTCTGCGAGCGGCTTTCCAGACAAGGCAAAAATGCAGACAGCCCGTGCACATATCCCCGT TGTACACGGCAAATTTGCAC
Product: esterase/lipase/thioesterase
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MDETSLTVEDARTALRQAQVTCVHDLAIESHGRSLPLRLYTPPGKGPFPVLVFFHGGGWVTGDLDTHDGFCRLMCEWAGC AVVAVDFARPPEHLFPAALEDCWTAFKWVTRQGAGCGLDTSSIAVAGGGSGGGMAAVISQRDAECDEPCICFQLLLYPLL DCNTRRSSHTRFGQGHGLTVDLLEWYLGHYLPPGTSRVDRRLSPLLSDSLHGLPRTLIITCGLDVLRDEGRAYAKRLRAA NVTVEHKEFSGMRHGFMNYPAAHEEARRALLLCARTLQAQLRGE
Sequences:
>Translated_284_residues MDETSLTVEDARTALRQAQVTCVHDLAIESHGRSLPLRLYTPPGKGPFPVLVFFHGGGWVTGDLDTHDGFCRLMCEWAGC AVVAVDFARPPEHLFPAALEDCWTAFKWVTRQGAGCGLDTSSIAVAGGGSGGGMAAVISQRDAECDEPCICFQLLLYPLL DCNTRRSSHTRFGQGHGLTVDLLEWYLGHYLPPGTSRVDRRLSPLLSDSLHGLPRTLIITCGLDVLRDEGRAYAKRLRAA NVTVEHKEFSGMRHGFMNYPAAHEEARRALLLCARTLQAQLRGE >Mature_284_residues MDETSLTVEDARTALRQAQVTCVHDLAIESHGRSLPLRLYTPPGKGPFPVLVFFHGGGWVTGDLDTHDGFCRLMCEWAGC AVVAVDFARPPEHLFPAALEDCWTAFKWVTRQGAGCGLDTSSIAVAGGGSGGGMAAVISQRDAECDEPCICFQLLLYPLL DCNTRRSSHTRFGQGHGLTVDLLEWYLGHYLPPGTSRVDRRLSPLLSDSLHGLPRTLIITCGLDVLRDEGRAYAKRLRAA NVTVEHKEFSGMRHGFMNYPAAHEEARRALLLCARTLQAQLRGE
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI206597554, Length=293, Percent_Identity=29.6928327645051, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI157041239, Length=130, Percent_Identity=33.8461538461538, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI61966717, Length=284, Percent_Identity=23.943661971831, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI21328446, Length=131, Percent_Identity=29.7709923664122, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1786682, Length=249, Percent_Identity=30.9236947791165, Blast_Score=100, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71996133, Length=319, Percent_Identity=26.9592476489028, Blast_Score=107, Evalue=7e-24, Organism=Caenorhabditis elegans, GI17567059, Length=286, Percent_Identity=27.2727272727273, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI72001146, Length=124, Percent_Identity=32.258064516129, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17540028, Length=160, Percent_Identity=27.5, Blast_Score=78, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 31116; Mature: 31116
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDETSLTVEDARTALRQAQVTCVHDLAIESHGRSLPLRLYTPPGKGPFPVLVFFHGGGWV CCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEEECCCEE TGDLDTHDGFCRLMCEWAGCAVVAVDFARPPEHLFPAALEDCWTAFKWVTRQGAGCGLDT ECCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SSIAVAGGGSGGGMAAVISQRDAECDEPCICFQLLLYPLLDCNTRRSSHTRFGQGHGLTV CCEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH DLLEWYLGHYLPPGTSRVDRRLSPLLSDSLHGLPRTLIITCGLDVLRDEGRAYAKRLRAA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHH NVTVEHKEFSGMRHGFMNYPAAHEEARRALLLCARTLQAQLRGE CCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDETSLTVEDARTALRQAQVTCVHDLAIESHGRSLPLRLYTPPGKGPFPVLVFFHGGGWV CCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEEECCCEE TGDLDTHDGFCRLMCEWAGCAVVAVDFARPPEHLFPAALEDCWTAFKWVTRQGAGCGLDT ECCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SSIAVAGGGSGGGMAAVISQRDAECDEPCICFQLLLYPLLDCNTRRSSHTRFGQGHGLTV CCEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH DLLEWYLGHYLPPGTSRVDRRLSPLLSDSLHGLPRTLIITCGLDVLRDEGRAYAKRLRAA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHH NVTVEHKEFSGMRHGFMNYPAAHEEARRALLLCARTLQAQLRGE CCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]