| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459057
Identifier: 77459057
GI number: 77459057
Start: 3266373
End: 3266924
Strand: Direct
Name: 77459057
Synonym: Pfl01_2832
Alternate gene names: NA
Gene position: 3266373-3266924 (Clockwise)
Preceding gene: 77459056
Following gene: 77459059
Centisome position: 50.73
GC content: 65.58
Gene sequence:
>552_bases ATGGCTTTACCGCTGAAGTTCACCGTGCTCGCCATTGGCCTGCTGCTCGGCGCCTGCAAAAGCGCTCCGATCAGCTTTCA TACCCTGACGCCGACGCAACCGATGGCCGGCCGTGCCGGCTCGGAAATCACCATCGAAGGCATCAGCGTGCCGCCCCAGG TCGACCGCCCGCAAATCGTGATCCGCCAGGGCAACAGCGGCCTGGCGATCCTTGAGACCGAATGGTGGGGCGCCAGCCTC AGCGATGAGTTGCGCAGCGCGCTGGTGGATCAGCTCAGTAATGCCGGCGGCCCGCGCAAAACCTCCGTGCGCATTGATGT GCAACGTTTCGATTCGATACCCGGGCAATACGGGCTGATCGACGTCAAATGGCGCCTGCGCCAAGCCAACGCCGGGGACG ATGCCCTGATCGCCTGCCGGTCGCTGCTACAGACCCCGTCCGGGCCGACCATCGACGATCTGGTGGCGGCCCAGCAGAAC AACGTCAAGCGTCTGGCCGCGTTGATCGGTCAGGCGGCGGGCACTGCGCGGGGCTGTCCACCGGCGTCCTGA
Upstream 100 bases:
>100_bases CTGGGCCGTCATCCGGAATCGTTGATTCGCGGCCGCCCCGACAACGCCGCGCCGCTGGACCTCAAAGGGCCGCCGCGCAA CTGAGCACAGGAGCTGTCCC
Downstream 100 bases:
>100_bases GCGTCCGTCTTCAAAAGGACGGTAAAACGACAACCGTGGGGCTCACGGGTTGTCAGGTCGACCTGCCAGTGCTCGCGATT GCAAATCCGCTGCACCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MALPLKFTVLAIGLLLGACKSAPISFHTLTPTQPMAGRAGSEITIEGISVPPQVDRPQIVIRQGNSGLAILETEWWGASL SDELRSALVDQLSNAGGPRKTSVRIDVQRFDSIPGQYGLIDVKWRLRQANAGDDALIACRSLLQTPSGPTIDDLVAAQQN NVKRLAALIGQAAGTARGCPPAS
Sequences:
>Translated_183_residues MALPLKFTVLAIGLLLGACKSAPISFHTLTPTQPMAGRAGSEITIEGISVPPQVDRPQIVIRQGNSGLAILETEWWGASL SDELRSALVDQLSNAGGPRKTSVRIDVQRFDSIPGQYGLIDVKWRLRQANAGDDALIACRSLLQTPSGPTIDDLVAAQQN NVKRLAALIGQAAGTARGCPPAS >Mature_182_residues ALPLKFTVLAIGLLLGACKSAPISFHTLTPTQPMAGRAGSEITIEGISVPPQVDRPQIVIRQGNSGLAILETEWWGASLS DELRSALVDQLSNAGGPRKTSVRIDVQRFDSIPGQYGLIDVKWRLRQANAGDDALIACRSLLQTPSGPTIDDLVAAQQNN VKRLAALIGQAAGTARGCPPAS
Specific function: Unknown
COG id: COG3009
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19288; Mature: 19157
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPLKFTVLAIGLLLGACKSAPISFHTLTPTQPMAGRAGSEITIEGISVPPQVDRPQIV CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEE IRQGNSGLAILETEWWGASLSDELRSALVDQLSNAGGPRKTSVRIDVQRFDSIPGQYGLI EEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCCEE DVKWRLRQANAGDDALIACRSLLQTPSGPTIDDLVAAQQNNVKRLAALIGQAAGTARGCP EEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC PAS CCC >Mature Secondary Structure ALPLKFTVLAIGLLLGACKSAPISFHTLTPTQPMAGRAGSEITIEGISVPPQVDRPQIV CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEE IRQGNSGLAILETEWWGASLSDELRSALVDQLSNAGGPRKTSVRIDVQRFDSIPGQYGLI EEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCCEE DVKWRLRQANAGDDALIACRSLLQTPSGPTIDDLVAAQQNNVKRLAALIGQAAGTARGCP EEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC PAS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA