| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459038
Identifier: 77459038
GI number: 77459038
Start: 3242276
End: 3243436
Strand: Direct
Name: 77459038
Synonym: Pfl01_2813
Alternate gene names: NA
Gene position: 3242276-3243436 (Clockwise)
Preceding gene: 77459037
Following gene: 77459039
Centisome position: 50.36
GC content: 55.3
Gene sequence:
>1161_bases ATGGCTTTGAAGTCACGATGCCCTGTCGCACTGATGATGGCCTGTCTTTATCCGGAAATGGCCTGGAGCATCAATCCGCA AGCCATTGATGTTTACGGATTCGACTTCACGCCATCTTTCCTGTTTTCAGAAAGTTATGACGACAACTTTCGCGAGTTGG AAAACAGCAAGCAGTCCTCCATGGTCACCAAGTTGGCACCCTCTTTCGAGCTCAAGGCCGAGGATCGCAACAGCGCCACC CGGCTGATCTGGCAACCCACTCGCTACATTTATCACGACGAGTCGGATGCCTCGAACACGGCCCAACGCGTACGAGCGGA CAGCATCATGGAGTTCACCGACCGGCATCGTCTGAAGCTCGACGCCGAATACCGCAAATGGGAGCGCACGGAATCCACGG CGGTCGAAGGCATCAACGACAAACTCAATAACAAACGCGTAGGTGGTCTCTACACCTTCGGTGCGAAAAGCGCTGACAAT CAGATCGATCTCGGGGCCAGTTACGCAGAACTTCGCTACGACAACGCCGATGGCATCAACGACGACAAGGAACGCAATAC CACGGCGCTCACCAGCACCTGGTATCACCGCATCGGCAGTAATACCCGAGGGCTGGTGGAATATAACCACACCGATTTTG ATTACCAGCAAGCCAACAGCCCGCGCAGCAGTAAATCCGATGCTGTCATGGCCGGTGCCGTATGGGATTTCACGGCACGC ACGACGGGCAAGGTCCGTATCGGTTACGAAAAAAAGAACTTCGACAACAGCGAATCCAAAGACCTCGACAACCCGACCTG GCAAGTGGATTTGCAATGGAAACCGCGAACCTATTCGACGTTCACCTTCGTCGCGCGCCAGGCCCTCGCCGAGGGCGATG ACGGCGCTGATGCCGTGAAGTCAACGTTCACCCAGGTGGGATGGCGCCACGGCTGGACCGAACGGATTACGACAGTGGCG CAAGCCGGTTACGGGCGTTATGTCTACGAAGGCCAAAGCCGTACCGACAATCTTCAGGACTACAACCTGGCAGTGGTGTA CGCCATGCGCCGTTGGCTGGATATCGAACTGGGTTATCGATATCGCGACAACGATTCCGATGCCGACAATGAAAGCTTCA CCCGCAACGTGTTCCAGATCAGCTTCAACGTCAGCCTTTAA
Upstream 100 bases:
>100_bases CCGGTCTGCCTGCCGCTCAGCGTGATTGAACGTCAACAACCTGGTTTTCACCCCTACAACTAACGACTTGCCTTATATGC CCTAGCTCAGGAGCTATAAC
Downstream 100 bases:
>100_bases GAGGGTCTCGACATGAACGCTCGCACACTTGTCCTTTTGTTCGCGTTGTTTCTCTTGCCTCACGTCCATGCGGCAGATCC TGCCACGCAATACAAACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MALKSRCPVALMMACLYPEMAWSINPQAIDVYGFDFTPSFLFSESYDDNFRELENSKQSSMVTKLAPSFELKAEDRNSAT RLIWQPTRYIYHDESDASNTAQRVRADSIMEFTDRHRLKLDAEYRKWERTESTAVEGINDKLNNKRVGGLYTFGAKSADN QIDLGASYAELRYDNADGINDDKERNTTALTSTWYHRIGSNTRGLVEYNHTDFDYQQANSPRSSKSDAVMAGAVWDFTAR TTGKVRIGYEKKNFDNSESKDLDNPTWQVDLQWKPRTYSTFTFVARQALAEGDDGADAVKSTFTQVGWRHGWTERITTVA QAGYGRYVYEGQSRTDNLQDYNLAVVYAMRRWLDIELGYRYRDNDSDADNESFTRNVFQISFNVSL
Sequences:
>Translated_386_residues MALKSRCPVALMMACLYPEMAWSINPQAIDVYGFDFTPSFLFSESYDDNFRELENSKQSSMVTKLAPSFELKAEDRNSAT RLIWQPTRYIYHDESDASNTAQRVRADSIMEFTDRHRLKLDAEYRKWERTESTAVEGINDKLNNKRVGGLYTFGAKSADN QIDLGASYAELRYDNADGINDDKERNTTALTSTWYHRIGSNTRGLVEYNHTDFDYQQANSPRSSKSDAVMAGAVWDFTAR TTGKVRIGYEKKNFDNSESKDLDNPTWQVDLQWKPRTYSTFTFVARQALAEGDDGADAVKSTFTQVGWRHGWTERITTVA QAGYGRYVYEGQSRTDNLQDYNLAVVYAMRRWLDIELGYRYRDNDSDADNESFTRNVFQISFNVSL >Mature_385_residues ALKSRCPVALMMACLYPEMAWSINPQAIDVYGFDFTPSFLFSESYDDNFRELENSKQSSMVTKLAPSFELKAEDRNSATR LIWQPTRYIYHDESDASNTAQRVRADSIMEFTDRHRLKLDAEYRKWERTESTAVEGINDKLNNKRVGGLYTFGAKSADNQ IDLGASYAELRYDNADGINDDKERNTTALTSTWYHRIGSNTRGLVEYNHTDFDYQQANSPRSSKSDAVMAGAVWDFTART TGKVRIGYEKKNFDNSESKDLDNPTWQVDLQWKPRTYSTFTFVARQALAEGDDGADAVKSTFTQVGWRHGWTERITTVAQ AGYGRYVYEGQSRTDNLQDYNLAVVYAMRRWLDIELGYRYRDNDSDADNESFTRNVFQISFNVSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44377; Mature: 44246
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKSRCPVALMMACLYPEMAWSINPQAIDVYGFDFTPSFLFSESYDDNFRELENSKQSS CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCCCCCHHHHHHCCHHHH MVTKLAPSFELKAEDRNSATRLIWQPTRYIYHDESDASNTAQRVRADSIMEFTDRHRLKL HHHHHCCCCEEEECCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEE DAEYRKWERTESTAVEGINDKLNNKRVGGLYTFGAKSADNQIDLGASYAELRYDNADGIN CHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEECCCCCCCCEECCCCHHEEEECCCCCCC DDKERNTTALTSTWYHRIGSNTRGLVEYNHTDFDYQQANSPRSSKSDAVMAGAVWDFTAR CCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHCCCCCCCCCCEEEEEEEEEEECC TTGKVRIGYEKKNFDNSESKDLDNPTWQVDLQWKPRTYSTFTFVARQALAEGDDGADAVK CCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHH STFTQVGWRHGWTERITTVAQAGYGRYVYEGQSRTDNLQDYNLAVVYAMRRWLDIELGYR HHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHEEEEECEE YRDNDSDADNESFTRNVFQISFNVSL ECCCCCCCCCHHHCCEEEEEEEEECC >Mature Secondary Structure ALKSRCPVALMMACLYPEMAWSINPQAIDVYGFDFTPSFLFSESYDDNFRELENSKQSS CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCCCCCHHHHHHCCHHHH MVTKLAPSFELKAEDRNSATRLIWQPTRYIYHDESDASNTAQRVRADSIMEFTDRHRLKL HHHHHCCCCEEEECCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEE DAEYRKWERTESTAVEGINDKLNNKRVGGLYTFGAKSADNQIDLGASYAELRYDNADGIN CHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEECCCCCCCCEECCCCHHEEEECCCCCCC DDKERNTTALTSTWYHRIGSNTRGLVEYNHTDFDYQQANSPRSSKSDAVMAGAVWDFTAR CCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHCCCCCCCCCCEEEEEEEEEEECC TTGKVRIGYEKKNFDNSESKDLDNPTWQVDLQWKPRTYSTFTFVARQALAEGDDGADAVK CCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHH STFTQVGWRHGWTERITTVAQAGYGRYVYEGQSRTDNLQDYNLAVVYAMRRWLDIELGYR HHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHEEEEECEE YRDNDSDADNESFTRNVFQISFNVSL ECCCCCCCCCHHHCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA