| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is mmlH [H]
Identifier: 77459023
GI number: 77459023
Start: 3223930
End: 3225219
Strand: Reverse
Name: mmlH [H]
Synonym: Pfl01_2798
Alternate gene names: 77459023
Gene position: 3225219-3223930 (Counterclockwise)
Preceding gene: 77459024
Following gene: 77459022
Centisome position: 50.09
GC content: 57.98
Gene sequence:
>1290_bases ATGTTCAGCTGGTATCGCCAAATCACTCCTCGGGAGCGCAAAACGTTTTGGGCCTGCTTCGGCGGATGGTCCCTCGACGC ACTGGAAGTACAAATGTTTGGCCTGGCGATTCCGGCTTTGATCGCCGCGTTCGCCTTGACCAAGGGCGATGCGGGGTTGA TCAGCGGAGTGACTCTGGTCACGTCAGCTATCGGCGGTTGGGTAGGGGGGACATTGTCCGACCGCTACGGCCGGGTGCGT ACGCTGCAGTGGATGATTGTGTGGTTCTCCTTTTTTACTTTTCTCTCCGCGTTTGTCACCGGTTTTAACCAGCTCTTGAT CGTCAAGGCGCTCCAGGGTTTCGGCATCGGCGGCGAGTGGGCAGCGGGTGCAGTATTGATGGCCGAAACCATCAATCCGC AGTATCGCGGCAAAGTGATGGGCACCGTACAAAGTGCCTGGGCCGTGGGTTGGGGGCTGGCGGTCGGAGTGTTCACACTG ATTTATTCCCTCGTGCCGCAGGACATGGCGTGGCGCGTGATGTTCCTGGTCGGGCTGCTACCGTCGTTTCTGATTATCTG GGTGCGTCGTAATGTCGAGGAGCCCGACAGCTTCCAGCGTCTGCAAAAAGAAAACGCCATCCCGCAAAGTTTCTTCAAAT CCCTGGCCGGCATCTTCCGCCCCGATTTGATCCGCGTAACGCTGTTCGGCGGTCTATTGGGGCTGGGTGCGCACGGTGGT TATCACGCGGTGATGACCTGGCTGCCAACGTTCCTCAAGACTGAGCGCAATCTGTCCGTACTGAATTCTGGTGGCTACCT GGCGGTGATCATTTTTGCGTTCTGGTGCGGATGTGTCGTCAGTGGCTTTTTGATCGATCGGATTGGCCGGCGCAAAAACA TCGTCCTGTTCGCGCTTTGCTGTGTCGTCACGGTGCAGAGTTATGTGTTCTTGCCGCTGACCAATACCCAGATGCTGTTC CTGGGGTTCCCGCTCGGCTTTTTTGCGGCCGGTATTCCCGCAAGCCTTGGCGCGTTATTCAACGAGCTATACCCGGCAGA CGTGCGCGGTGCCGGCGTCGGCTTCTGCTACAACTTTGGCCGAGTGCTTTCCGCGGTGTTCCCGTTCCTCGTCGGTCACA TGAGCGACTCCATGTCCCTTGGATCTGCGATTGGTATCGACGCAGGGATTGCCTATGGCGTTGCGGTGATTGCGGCACTT TGTCTGCCGGAAACCCGTGGACGCAGCCTCGAAGCTTCGAATACATCGGTGACAGTCACGATCAACGGCAACGAGAGTGC GCGGGCCTGA
Upstream 100 bases:
>100_bases CGGTCGCCGCTGGTTTGATCGTTTTGTTTGAGATGACTGGCCCCGAAGCGGCGCGGTTCGCGCTCGGCTGCCTCACGTTC CGCCTATAAGGATAAGAATC
Downstream 100 bases:
>100_bases TGCCCATTACCTTCTATTAGATGAACGCTATGACTGATACCTGCTCTACACCGATCACCGGCATCGACTCCCATGCTCAT GTGTTCAGCCGTGATCTGAA
Product: general substrate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MFSWYRQITPRERKTFWACFGGWSLDALEVQMFGLAIPALIAAFALTKGDAGLISGVTLVTSAIGGWVGGTLSDRYGRVR TLQWMIVWFSFFTFLSAFVTGFNQLLIVKALQGFGIGGEWAAGAVLMAETINPQYRGKVMGTVQSAWAVGWGLAVGVFTL IYSLVPQDMAWRVMFLVGLLPSFLIIWVRRNVEEPDSFQRLQKENAIPQSFFKSLAGIFRPDLIRVTLFGGLLGLGAHGG YHAVMTWLPTFLKTERNLSVLNSGGYLAVIIFAFWCGCVVSGFLIDRIGRRKNIVLFALCCVVTVQSYVFLPLTNTQMLF LGFPLGFFAAGIPASLGALFNELYPADVRGAGVGFCYNFGRVLSAVFPFLVGHMSDSMSLGSAIGIDAGIAYGVAVIAAL CLPETRGRSLEASNTSVTVTINGNESARA
Sequences:
>Translated_429_residues MFSWYRQITPRERKTFWACFGGWSLDALEVQMFGLAIPALIAAFALTKGDAGLISGVTLVTSAIGGWVGGTLSDRYGRVR TLQWMIVWFSFFTFLSAFVTGFNQLLIVKALQGFGIGGEWAAGAVLMAETINPQYRGKVMGTVQSAWAVGWGLAVGVFTL IYSLVPQDMAWRVMFLVGLLPSFLIIWVRRNVEEPDSFQRLQKENAIPQSFFKSLAGIFRPDLIRVTLFGGLLGLGAHGG YHAVMTWLPTFLKTERNLSVLNSGGYLAVIIFAFWCGCVVSGFLIDRIGRRKNIVLFALCCVVTVQSYVFLPLTNTQMLF LGFPLGFFAAGIPASLGALFNELYPADVRGAGVGFCYNFGRVLSAVFPFLVGHMSDSMSLGSAIGIDAGIAYGVAVIAAL CLPETRGRSLEASNTSVTVTINGNESARA >Mature_429_residues MFSWYRQITPRERKTFWACFGGWSLDALEVQMFGLAIPALIAAFALTKGDAGLISGVTLVTSAIGGWVGGTLSDRYGRVR TLQWMIVWFSFFTFLSAFVTGFNQLLIVKALQGFGIGGEWAAGAVLMAETINPQYRGKVMGTVQSAWAVGWGLAVGVFTL IYSLVPQDMAWRVMFLVGLLPSFLIIWVRRNVEEPDSFQRLQKENAIPQSFFKSLAGIFRPDLIRVTLFGGLLGLGAHGG YHAVMTWLPTFLKTERNLSVLNSGGYLAVIIFAFWCGCVVSGFLIDRIGRRKNIVLFALCCVVTVQSYVFLPLTNTQMLF LGFPLGFFAAGIPASLGALFNELYPADVRGAGVGFCYNFGRVLSAVFPFLVGHMSDSMSLGSAIGIDAGIAYGVAVIAAL CLPETRGRSLEASNTSVTVTINGNESARA
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=446, Percent_Identity=23.7668161434978, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI213021148, Length=444, Percent_Identity=21.8468468468468, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI87082404, Length=388, Percent_Identity=24.2268041237113, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI87082231, Length=203, Percent_Identity=28.5714285714286, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790550, Length=401, Percent_Identity=24.9376558603491, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI87081723, Length=376, Percent_Identity=27.6595744680851, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI87082159, Length=367, Percent_Identity=25.8855585831063, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1788942, Length=314, Percent_Identity=24.8407643312102, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1788292, Length=340, Percent_Identity=23.8235294117647, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1789152, Length=377, Percent_Identity=24.1379310344828, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1789941, Length=388, Percent_Identity=27.0618556701031, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46547; Mature: 46547
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSWYRQITPRERKTFWACFGGWSLDALEVQMFGLAIPALIAAFALTKGDAGLISGVTLV CCCHHHCCCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH TSAIGGWVGGTLSDRYGRVRTLQWMIVWFSFFTFLSAFVTGFNQLLIVKALQGFGIGGEW HHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH AAGAVLMAETINPQYRGKVMGTVQSAWAVGWGLAVGVFTLIYSLVPQDMAWRVMFLVGLL HHCCEEEEHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH PSFLIIWVRRNVEEPDSFQRLQKENAIPQSFFKSLAGIFRPDLIRVTLFGGLLGLGAHGG HHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC YHAVMTWLPTFLKTERNLSVLNSGGYLAVIIFAFWCGCVVSGFLIDRIGRRKNIVLFALC HHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH CVVTVQSYVFLPLTNTQMLFLGFPLGFFAAGIPASLGALFNELYPADVRGAGVGFCYNFG HHHHHHHHEEEEECCCEEEEEECCHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH RVLSAVFPFLVGHMSDSMSLGSAIGIDAGIAYGVAVIAALCLPETRGRSLEASNTSVTVT HHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEE INGNESARA ECCCCCCCC >Mature Secondary Structure MFSWYRQITPRERKTFWACFGGWSLDALEVQMFGLAIPALIAAFALTKGDAGLISGVTLV CCCHHHCCCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH TSAIGGWVGGTLSDRYGRVRTLQWMIVWFSFFTFLSAFVTGFNQLLIVKALQGFGIGGEW HHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH AAGAVLMAETINPQYRGKVMGTVQSAWAVGWGLAVGVFTLIYSLVPQDMAWRVMFLVGLL HHCCEEEEHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH PSFLIIWVRRNVEEPDSFQRLQKENAIPQSFFKSLAGIFRPDLIRVTLFGGLLGLGAHGG HHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC YHAVMTWLPTFLKTERNLSVLNSGGYLAVIIFAFWCGCVVSGFLIDRIGRRKNIVLFALC HHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH CVVTVQSYVFLPLTNTQMLFLGFPLGFFAAGIPASLGALFNELYPADVRGAGVGFCYNFG HHHHHHHHEEEEECCCEEEEEECCHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH RVLSAVFPFLVGHMSDSMSLGSAIGIDAGIAYGVAVIAALCLPETRGRSLEASNTSVTVT HHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEE INGNESARA ECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]