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The map label for this gene is oprJ [H]

Identifier: 77458981

GI number: 77458981

Start: 3179067

End: 3180476

Strand: Reverse

Name: oprJ [H]

Synonym: Pfl01_2756

Alternate gene names: 77458981

Gene position: 3180476-3179067 (Counterclockwise)

Preceding gene: 77458982

Following gene: 77458979

Centisome position: 49.4

GC content: 62.91

Gene sequence:

>1410_bases
ATGCGTATTTCAGGATTTTCTACGCTGGTGATCGCCATGCTGCTGGCCGGTTGCTCGTTGGCGCCGACCTATGAGCGGCC
CGTTGCACCGGTCGCGGACAACTGGGCGGGCGAGTCGCTGAAACAAGGCGCTCCGATCAACCAATTGGCGTGGCAGGCGT
TCATCGTCGATCCCGATCTGCGCCGTCTGGTGGAGGTTGCGCTGGATAACAATCGCTCATTGCGCCAGACCCTTCTGGAC
ATCGAGCAGGCTCGGGCGCAGTACCGAATTCAGCGGGCTGATCGGGTTCCCGGGCTGAATGCAAGCGCGTCCGGCAATCG
CCAGCGCTTGCCGTCGGACTTGGCCAGCGACGGCCGGGCAGGGGTGGCCAGCCAGTATCAAGTCGGCCTGTCGCTGCCCG
AATACGAGCTGGATCTGTTTGGCCGGGTCAAAAGCCTCAGCGACTCTGCGCTGCAGGAATATCTGGCTACCGAAGAAGCC
GCCCGCGCCGCGCAGATCGCGCTGATCGCCGAAGTCAGTCAGGCCTATCTGGTTCATGACGGCGCCCAGCGTCGTCTGGA
TTTGACTCAACAAACCCTGAGCAGCCGCGAATACTCGTTCGCGCTGATCAGCCAGCGCCGCTCCAGCGGCACGGCGACTG
CGCTGGATTATCAGGAAGCACTGGGGCTGGTGGAGCAGGCGCGGGCCGAGCAGGAACGCAATCTGCGCGAGAAGCAGCAG
GCGTTCAACGCGCTGGTTTTGCTGCTGGGGACAAAGGATGCAGGGAAAGTGATTCCCGAGCGGCTGACGACGCAGCCGAT
GCTGGTGCAGGACATCGCCCCGGATACCACCTCGACGCTGATCGAGCGCCGGCCGGACATTCTTGCGGCCGAGCATCGAC
TGCAAGCGCGCAATGCCGACATCGGCGCGGCACGGGCGGCGTTCTTTCCGCGTATCAGCCTGACCGGCAGCTTTGGTACT
TCCAGCGCGCAGATGTCCGGTCTGTTCGACGGTGGCTCGCGCTCCTGGAGTTTCGTGCCGAACCTTTCGCTGCCGTTGTT
CGATGCCGGTCGCAACAGTGCCGGGCTGAGTCTGGCCGAAGCCCGCAAGGATTCAGCCGTGGCGGCCTATGAAGGCACGA
TTCAGACGGCGTTCCGCGAGGTCGCCGATGCATTGGCCGCCACCGACACCTTGCGCCGGGAGGAAGCCGCGCGCCGCGCA
CTGGCCAACACCAGCACTGAAACCCTGAGTCTGGCCAAGGCCCGTTATGAAGGCGGTATCGACAGCCACCTGCGTTATCT
CGATGCCCAGCGCACCAGTTTCGTCAACGAAACGGCGTTTATCGAAGTCAGCACTCAGCGCCAGATTGCCCTGGTCGATC
TGTTCCGTTCGCTGGGTGGAGGATGGTCATCACAAACAAACGTCAGATAA

Upstream 100 bases:

>100_bases
GGGGGTGTTGTTTGTACCGATCTGTTTTGTCTGGGTGCTGTCGATGCTGCGCAGTAAACCTGCGCCCATTGAACAACCCG
CTTTGACTCAGGAGTGACAC

Downstream 100 bases:

>100_bases
ATCCTGGCAAGAGCTCCTTTGGGTTGGCGCATCCAACCTTTTGCCCCGTAGACCGAGAGGTCACGGGGCTTTTTTGCAGG
AGGATAGAGTGTGGATTATT

Product: RND efflux system outer membrane lipoprotein NodT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MRISGFSTLVIAMLLAGCSLAPTYERPVAPVADNWAGESLKQGAPINQLAWQAFIVDPDLRRLVEVALDNNRSLRQTLLD
IEQARAQYRIQRADRVPGLNASASGNRQRLPSDLASDGRAGVASQYQVGLSLPEYELDLFGRVKSLSDSALQEYLATEEA
ARAAQIALIAEVSQAYLVHDGAQRRLDLTQQTLSSREYSFALISQRRSSGTATALDYQEALGLVEQARAEQERNLREKQQ
AFNALVLLLGTKDAGKVIPERLTTQPMLVQDIAPDTTSTLIERRPDILAAEHRLQARNADIGAARAAFFPRISLTGSFGT
SSAQMSGLFDGGSRSWSFVPNLSLPLFDAGRNSAGLSLAEARKDSAVAAYEGTIQTAFREVADALAATDTLRREEAARRA
LANTSTETLSLAKARYEGGIDSHLRYLDAQRTSFVNETAFIEVSTQRQIALVDLFRSLGGGWSSQTNVR

Sequences:

>Translated_469_residues
MRISGFSTLVIAMLLAGCSLAPTYERPVAPVADNWAGESLKQGAPINQLAWQAFIVDPDLRRLVEVALDNNRSLRQTLLD
IEQARAQYRIQRADRVPGLNASASGNRQRLPSDLASDGRAGVASQYQVGLSLPEYELDLFGRVKSLSDSALQEYLATEEA
ARAAQIALIAEVSQAYLVHDGAQRRLDLTQQTLSSREYSFALISQRRSSGTATALDYQEALGLVEQARAEQERNLREKQQ
AFNALVLLLGTKDAGKVIPERLTTQPMLVQDIAPDTTSTLIERRPDILAAEHRLQARNADIGAARAAFFPRISLTGSFGT
SSAQMSGLFDGGSRSWSFVPNLSLPLFDAGRNSAGLSLAEARKDSAVAAYEGTIQTAFREVADALAATDTLRREEAARRA
LANTSTETLSLAKARYEGGIDSHLRYLDAQRTSFVNETAFIEVSTQRQIALVDLFRSLGGGWSSQTNVR
>Mature_469_residues
MRISGFSTLVIAMLLAGCSLAPTYERPVAPVADNWAGESLKQGAPINQLAWQAFIVDPDLRRLVEVALDNNRSLRQTLLD
IEQARAQYRIQRADRVPGLNASASGNRQRLPSDLASDGRAGVASQYQVGLSLPEYELDLFGRVKSLSDSALQEYLATEEA
ARAAQIALIAEVSQAYLVHDGAQRRLDLTQQTLSSREYSFALISQRRSSGTATALDYQEALGLVEQARAEQERNLREKQQ
AFNALVLLLGTKDAGKVIPERLTTQPMLVQDIAPDTTSTLIERRPDILAAEHRLQARNADIGAARAAFFPRISLTGSFGT
SSAQMSGLFDGGSRSWSFVPNLSLPLFDAGRNSAGLSLAEARKDSAVAAYEGTIQTAFREVADALAATDTLRREEAARRA
LANTSTETLSLAKARYEGGIDSHLRYLDAQRTSFVNETAFIEVSTQRQIALVDLFRSLGGGWSSQTNVR

Specific function: Channel-forming component of a multidrug resistance efflux pump [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI1786785, Length=461, Percent_Identity=38.8286334056399, Blast_Score=311, Evalue=5e-86,
Organism=Escherichia coli, GI2367348, Length=475, Percent_Identity=25.8947368421053, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 51077; Mature: 51077

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISGFSTLVIAMLLAGCSLAPTYERPVAPVADNWAGESLKQGAPINQLAWQAFIVDPDL
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHEEEEECHHH
RRLVEVALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQRLPSDLASDGRA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHCCCCC
GVASQYQVGLSLPEYELDLFGRVKSLSDSALQEYLATEEAARAAQIALIAEVSQAYLVHD
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GAQRRLDLTQQTLSSREYSFALISQRRSSGTATALDYQEALGLVEQARAEQERNLREKQQ
CHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
AFNALVLLLGTKDAGKVIPERLTTQPMLVQDIAPDTTSTLIERRPDILAAEHRLQARNAD
HHHHEEEEEECCCHHHHHHHHHCCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCC
IGAARAAFFPRISLTGSFGTSSAQMSGLFDGGSRSWSFVPNLSLPLFDAGRNSAGLSLAE
CCHHHHHHCCCEEEECCCCCCCHHHCCEECCCCCCCEECCCCCCCEEECCCCCCCCCHHH
ARKDSAVAAYEGTIQTAFREVADALAATDTLRREEAARRALANTSTETLSLAKARYEGGI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH
DSHLRYLDAQRTSFVNETAFIEVSTQRQIALVDLFRSLGGGWSSQTNVR
HHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRISGFSTLVIAMLLAGCSLAPTYERPVAPVADNWAGESLKQGAPINQLAWQAFIVDPDL
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHEEEEECHHH
RRLVEVALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQRLPSDLASDGRA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHCCCCC
GVASQYQVGLSLPEYELDLFGRVKSLSDSALQEYLATEEAARAAQIALIAEVSQAYLVHD
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GAQRRLDLTQQTLSSREYSFALISQRRSSGTATALDYQEALGLVEQARAEQERNLREKQQ
CHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
AFNALVLLLGTKDAGKVIPERLTTQPMLVQDIAPDTTSTLIERRPDILAAEHRLQARNAD
HHHHEEEEEECCCHHHHHHHHHCCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCC
IGAARAAFFPRISLTGSFGTSSAQMSGLFDGGSRSWSFVPNLSLPLFDAGRNSAGLSLAE
CCHHHHHHCCCEEEECCCCCCCHHHCCEECCCCCCCEECCCCCCCEEECCCCCCCCCHHH
ARKDSAVAAYEGTIQTAFREVADALAATDTLRREEAARRALANTSTETLSLAKARYEGGI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH
DSHLRYLDAQRTSFVNETAFIEVSTQRQIALVDLFRSLGGGWSSQTNVR
HHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8878035; 10984043 [H]