| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is qumA [H]
Identifier: 77458937
GI number: 77458937
Start: 3127028
End: 3129433
Strand: Reverse
Name: qumA [H]
Synonym: Pfl01_2712
Alternate gene names: 77458937
Gene position: 3129433-3127028 (Counterclockwise)
Preceding gene: 77458939
Following gene: 77458936
Centisome position: 48.61
GC content: 62.97
Gene sequence:
>2406_bases GTGAAGCAGAGTCAACGCCTCTCGGGCATATCAACATTCATTCTGGTCGGGCTGGGCGTGATCATCGCCCTGCTCGGCCT GGCACTGGCCGCTGGCGGTGTGAAATTGGTCAGCCTGGGAGGCTCCTGGTACTTCCTGGTGGGTGGTCTGGTGATGGCCG TTTCCGGTCTGCTGATCGCGCGGCGCAAGCCTGCCGGTGCCTGGCTGTTCGCGGCGTTTCTGGTTGGGACCGCCATCTGG GCCGTGATCGACGCAGGGCTGGTGTTCTGGCCGGTGTTCTCTCGCCTGTTCATGTTCAGCGCGGTGGGTCTGGTGGTCGC GCTGGTCTATCCGCTGCTCAAACGCGCCAATGGTGACGTTGCAGGTCGCGGTGCTTACGGCGTTGCGGCTGTTCTGGCCG TTGGACTGGCCGTGGCTGCCGGCAACATGTTCGTCGCGCACCCGACCGTCGCCCCTACCGGCACCGGCCCGGGCCTCACC CCGGTCGAGCCGGAAAAGGCGCAGAAAGACTGGGCCCACTACGGCAATACCGAAGGCGGCAGCCGCTTCGCCGCGCTGGA CCAGATCAACCGCAGCAACGTCGACAAGCTGAAAGTGGCGTGGACCTACCACACCGGCGACATCGCCGAGAGCGATGGCA ACGGTGCCGAAGACCAGCTGACCCCACTGCAGATTGGCAACAAGGTGTTCATCTGCACCCCGCACAACAACCTGATTGCG CTGGATGCCGATACCGGTAAAGAGCTCTGGAAAAACGCGATCAACGCTCAATCCAAAGTCTGGCAGCGTTGCCGTGGCAT GGCGTATTTCGACGCCAGCGCCGCCGTCGCCAAACCGGCCAGCGCGCCAGTGAGCGAAACCCCGACCGCTCCAATCGCCA ACTGCACACGTCGCTTGCTGACCAACACCATCGACGCCCGCCTGATCGCGGTTGATGCCGACACCGGCGAGTTCTGCCGG GGTTTCGGCAACAATGGCCAGGTCGATCTGAAGGCCGGTCTGGGTGATGTCCCGGACAGCTACTATCAACTGTCCTCCGC GCCGCTGATGGCCGGCACCACTGTGGTGGTTGGCGGTCGTGTGGCCGACAACGTGCAGACCGACATGCCGGGCGGCGTGA TCCGTGGTTTCGACGTGATGACCGGTGCCATGCGCTGGGCATTCGACCCGGGCAATCCAACCGATCGCAAGGCACCCGCA GACGGCAGCACTTATGTGCGCAGCACGCCGAACAGCTGGGCCCCGATGTCCTACGACCCGGCGACCAACACCGTATTCCT GCCGATGGGCAGTTCTTCCACCGACATCTATGGTGTCGAGCGCAGCAAACTCGATCACACCTACGGTGCCTCCGTCCTGG CGCTGGACGCCAACAGCGGCGAAGAAAAGTGGGTATTCCAGACCGTGCACAACGACCTCTGGGACTTCGACTTGCCGATG CAGCCAAGCCTGATCGACTTCACCAAGGACGGTAAAACCGTACCGGCGGTGGTCATCGGCACCAAGGCCGGGCAGATTTA CGTGCTCGACCGCGCCACTGGCAAACCGTTGACCGACGTAAAGGAAGTGCCGGTCAAGGCCGCCAATATCCCCAACGAGC CGTACTCGCCGACCCAGCCGAAATCCGTGGGCATGCCGCAAATCGGTGCCCAGCACTTGACTGAATCGGACATGTGGGGC GCCACCCCGTACGACCAGCTGCTGTGCCGGATCGATTTCAAGTCGATGCGTTACGACGGCTTGTACACCGCGCCGGGCAC TGACAAATCCCTGAGTTTCCCGGGTTCGCTGGGCGGCATGAACTGGGGCAGCATTTCCACTGACCCGGTGCACGGTTTCA TCTTCGTCAACGACATGCGTCTGGGCCTGTGGATTCAGATGATCCCGTCGCAGAACAAGGCTCAGGCCTCTTCCGGTGGC GAAGCGCTGAACACCGGCATGGGTGCCGTGCCGCTCAAGGGCACGCCTTACGCCGTGAACAAAAACCGCTTCCTGTCGGT CGCCGGCATTCCGTGCCAGGCCCCGCCGTTCGGTACGCTGACCGCCATCGACATGAAAACCCAGAAAGTCGCCTGGCAAG TGCCGGTCGGCACCGTTGAAGACACCGGTCCCTTGGGCATCCGCATGCACCTGCCGATCAAGATCGGTCTGCCAACCCTC GGCGGCACGCTGTCGACCCAGGGCGGCCTGATCTTCATCGCCGGCACCCAGGACTTCTACCTGCGCGCCTTCAACAGCGC CAATGGTGAAGAAATCTGGAAAGCGCGTCTGCCGGTCGGCAGTCAGGGTGGCCCGATGACCTATGTGTCGCCGAAAACCG GCAAGCAATACGTGGTCATCACCGCCGGTGGCGCTCGCCAGTCGACTGATCGCGGTGACTACGTGATGGCTTACGCCCTG CCGTAA
Upstream 100 bases:
>100_bases CTTCGCTGAGCAGCAAACTACACTTCATGCTGATTTAGTGATTTAACTAGGTAGTTACCTAACTATATAATGCACGCCTC ATTTCAACGGGACATTCAAC
Downstream 100 bases:
>100_bases ACCGTCGCGTTCGCCTTCGTTTCACTTGTGCGCGGCACCTTCGGGTGCCGCGTTGTTTCATGTCCTTCGCTCTGGATTTG CGCAATGTCATTGGCTGTTC
Product: Pyrrolo-quinoline quinone
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 801; Mature: 801
Protein sequence:
>801_residues MKQSQRLSGISTFILVGLGVIIALLGLALAAGGVKLVSLGGSWYFLVGGLVMAVSGLLIARRKPAGAWLFAAFLVGTAIW AVIDAGLVFWPVFSRLFMFSAVGLVVALVYPLLKRANGDVAGRGAYGVAAVLAVGLAVAAGNMFVAHPTVAPTGTGPGLT PVEPEKAQKDWAHYGNTEGGSRFAALDQINRSNVDKLKVAWTYHTGDIAESDGNGAEDQLTPLQIGNKVFICTPHNNLIA LDADTGKELWKNAINAQSKVWQRCRGMAYFDASAAVAKPASAPVSETPTAPIANCTRRLLTNTIDARLIAVDADTGEFCR GFGNNGQVDLKAGLGDVPDSYYQLSSAPLMAGTTVVVGGRVADNVQTDMPGGVIRGFDVMTGAMRWAFDPGNPTDRKAPA DGSTYVRSTPNSWAPMSYDPATNTVFLPMGSSSTDIYGVERSKLDHTYGASVLALDANSGEEKWVFQTVHNDLWDFDLPM QPSLIDFTKDGKTVPAVVIGTKAGQIYVLDRATGKPLTDVKEVPVKAANIPNEPYSPTQPKSVGMPQIGAQHLTESDMWG ATPYDQLLCRIDFKSMRYDGLYTAPGTDKSLSFPGSLGGMNWGSISTDPVHGFIFVNDMRLGLWIQMIPSQNKAQASSGG EALNTGMGAVPLKGTPYAVNKNRFLSVAGIPCQAPPFGTLTAIDMKTQKVAWQVPVGTVEDTGPLGIRMHLPIKIGLPTL GGTLSTQGGLIFIAGTQDFYLRAFNSANGEEIWKARLPVGSQGGPMTYVSPKTGKQYVVITAGGARQSTDRGDYVMAYAL P
Sequences:
>Translated_801_residues MKQSQRLSGISTFILVGLGVIIALLGLALAAGGVKLVSLGGSWYFLVGGLVMAVSGLLIARRKPAGAWLFAAFLVGTAIW AVIDAGLVFWPVFSRLFMFSAVGLVVALVYPLLKRANGDVAGRGAYGVAAVLAVGLAVAAGNMFVAHPTVAPTGTGPGLT PVEPEKAQKDWAHYGNTEGGSRFAALDQINRSNVDKLKVAWTYHTGDIAESDGNGAEDQLTPLQIGNKVFICTPHNNLIA LDADTGKELWKNAINAQSKVWQRCRGMAYFDASAAVAKPASAPVSETPTAPIANCTRRLLTNTIDARLIAVDADTGEFCR GFGNNGQVDLKAGLGDVPDSYYQLSSAPLMAGTTVVVGGRVADNVQTDMPGGVIRGFDVMTGAMRWAFDPGNPTDRKAPA DGSTYVRSTPNSWAPMSYDPATNTVFLPMGSSSTDIYGVERSKLDHTYGASVLALDANSGEEKWVFQTVHNDLWDFDLPM QPSLIDFTKDGKTVPAVVIGTKAGQIYVLDRATGKPLTDVKEVPVKAANIPNEPYSPTQPKSVGMPQIGAQHLTESDMWG ATPYDQLLCRIDFKSMRYDGLYTAPGTDKSLSFPGSLGGMNWGSISTDPVHGFIFVNDMRLGLWIQMIPSQNKAQASSGG EALNTGMGAVPLKGTPYAVNKNRFLSVAGIPCQAPPFGTLTAIDMKTQKVAWQVPVGTVEDTGPLGIRMHLPIKIGLPTL GGTLSTQGGLIFIAGTQDFYLRAFNSANGEEIWKARLPVGSQGGPMTYVSPKTGKQYVVITAGGARQSTDRGDYVMAYAL P >Mature_801_residues MKQSQRLSGISTFILVGLGVIIALLGLALAAGGVKLVSLGGSWYFLVGGLVMAVSGLLIARRKPAGAWLFAAFLVGTAIW AVIDAGLVFWPVFSRLFMFSAVGLVVALVYPLLKRANGDVAGRGAYGVAAVLAVGLAVAAGNMFVAHPTVAPTGTGPGLT PVEPEKAQKDWAHYGNTEGGSRFAALDQINRSNVDKLKVAWTYHTGDIAESDGNGAEDQLTPLQIGNKVFICTPHNNLIA LDADTGKELWKNAINAQSKVWQRCRGMAYFDASAAVAKPASAPVSETPTAPIANCTRRLLTNTIDARLIAVDADTGEFCR GFGNNGQVDLKAGLGDVPDSYYQLSSAPLMAGTTVVVGGRVADNVQTDMPGGVIRGFDVMTGAMRWAFDPGNPTDRKAPA DGSTYVRSTPNSWAPMSYDPATNTVFLPMGSSSTDIYGVERSKLDHTYGASVLALDANSGEEKWVFQTVHNDLWDFDLPM QPSLIDFTKDGKTVPAVVIGTKAGQIYVLDRATGKPLTDVKEVPVKAANIPNEPYSPTQPKSVGMPQIGAQHLTESDMWG ATPYDQLLCRIDFKSMRYDGLYTAPGTDKSLSFPGSLGGMNWGSISTDPVHGFIFVNDMRLGLWIQMIPSQNKAQASSGG EALNTGMGAVPLKGTPYAVNKNRFLSVAGIPCQAPPFGTLTAIDMKTQKVAWQVPVGTVEDTGPLGIRMHLPIKIGLPTL GGTLSTQGGLIFIAGTQDFYLRAFNSANGEEIWKARLPVGSQGGPMTYVSPKTGKQYVVITAGGARQSTDRGDYVMAYAL P
Specific function: Gdh Is Probably Involved In Energy Conservation Rather Than In Sugar Metabolism. [C]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial PQQ dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=804, Percent_Identity=40.1741293532338, Blast_Score=542, Evalue=1e-155,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017511 - InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.99.25 [H]
Molecular weight: Translated: 84823; Mature: 84823
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: PS00364 BACTERIAL_PQQ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSQRLSGISTFILVGLGVIIALLGLALAAGGVKLVSLGGSWYFLVGGLVMAVSGLLIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHEE RRKPAGAWLFAAFLVGTAIWAVIDAGLVFWPVFSRLFMFSAVGLVVALVYPLLKRANGDV ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AGRGAYGVAAVLAVGLAVAAGNMFVAHPTVAPTGTGPGLTPVEPEKAQKDWAHYGNTEGG CCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC SRFAALDQINRSNVDKLKVAWTYHTGDIAESDGNGAEDQLTPLQIGNKVFICTPHNNLIA CEEHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEECCCEEEEECCCCCEEE LDADTGKELWKNAINAQSKVWQRCRGMAYFDASAAVAKPASAPVSETPTAPIANCTRRLL EECCCCHHHHHHHHCHHHHHHHHHCCCEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHH TNTIDARLIAVDADTGEFCRGFGNNGQVDLKAGLGDVPDSYYQLSSAPLMAGTTVVVGGR HCCCCEEEEEEECCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHCCCCEEECCEEEECCE VADNVQTDMPGGVIRGFDVMTGAMRWAFDPGNPTDRKAPADGSTYVRSTPNSWAPMSYDP ECCCCCCCCCCCEEECHHHHHCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC ATNTVFLPMGSSSTDIYGVERSKLDHTYGASVLALDANSGEEKWVFQTVHNDLWDFDLPM CCCEEEEECCCCCCEEEECHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCC QPSLIDFTKDGKTVPAVVIGTKAGQIYVLDRATGKPLTDVKEVPVKAANIPNEPYSPTQP CCCEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHHCCEEECCCCCCCCCCCCC KSVGMPQIGAQHLTESDMWGATPYDQLLCRIDFKSMRYDGLYTAPGTDKSLSFPGSLGGM CCCCCCCCCHHHCCCCCCCCCCCHHHHEEEEEHHHCCCCCEEECCCCCCCEECCCCCCCC NWGSISTDPVHGFIFVNDMRLGLWIQMIPSQNKAQASSGGEALNTGMGAVPLKGTPYAVN CCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEC KNRFLSVAGIPCQAPPFGTLTAIDMKTQKVAWQVPVGTVEDTGPLGIRMHLPIKIGLPTL CCCEEEEECCCCCCCCCCCEEEEEECEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCC GGTLSTQGGLIFIAGTQDFYLRAFNSANGEEIWKARLPVGSQGGPMTYVSPKTGKQYVVI CCCEECCCCEEEEECCCCEEEEEECCCCCHHHEEEECCCCCCCCCEEEECCCCCCEEEEE TAGGARQSTDRGDYVMAYALP EECCCCCCCCCCCEEEEEECC >Mature Secondary Structure MKQSQRLSGISTFILVGLGVIIALLGLALAAGGVKLVSLGGSWYFLVGGLVMAVSGLLIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHEE RRKPAGAWLFAAFLVGTAIWAVIDAGLVFWPVFSRLFMFSAVGLVVALVYPLLKRANGDV ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AGRGAYGVAAVLAVGLAVAAGNMFVAHPTVAPTGTGPGLTPVEPEKAQKDWAHYGNTEGG CCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC SRFAALDQINRSNVDKLKVAWTYHTGDIAESDGNGAEDQLTPLQIGNKVFICTPHNNLIA CEEHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEECCCEEEEECCCCCEEE LDADTGKELWKNAINAQSKVWQRCRGMAYFDASAAVAKPASAPVSETPTAPIANCTRRLL EECCCCHHHHHHHHCHHHHHHHHHCCCEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHH TNTIDARLIAVDADTGEFCRGFGNNGQVDLKAGLGDVPDSYYQLSSAPLMAGTTVVVGGR HCCCCEEEEEEECCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHCCCCEEECCEEEECCE VADNVQTDMPGGVIRGFDVMTGAMRWAFDPGNPTDRKAPADGSTYVRSTPNSWAPMSYDP ECCCCCCCCCCCEEECHHHHHCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC ATNTVFLPMGSSSTDIYGVERSKLDHTYGASVLALDANSGEEKWVFQTVHNDLWDFDLPM CCCEEEEECCCCCCEEEECHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCC QPSLIDFTKDGKTVPAVVIGTKAGQIYVLDRATGKPLTDVKEVPVKAANIPNEPYSPTQP CCCEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHHCCEEECCCCCCCCCCCCC KSVGMPQIGAQHLTESDMWGATPYDQLLCRIDFKSMRYDGLYTAPGTDKSLSFPGSLGGM CCCCCCCCCHHHCCCCCCCCCCCHHHHEEEEEHHHCCCCCEEECCCCCCCEECCCCCCCC NWGSISTDPVHGFIFVNDMRLGLWIQMIPSQNKAQASSGGEALNTGMGAVPLKGTPYAVN CCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEC KNRFLSVAGIPCQAPPFGTLTAIDMKTQKVAWQVPVGTVEDTGPLGIRMHLPIKIGLPTL CCCEEEEECCCCCCCCCCCEEEEEECEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCC GGTLSTQGGLIFIAGTQDFYLRAFNSANGEEIWKARLPVGSQGGPMTYVSPKTGKQYVVI CCCEECCCCEEEEECCCCEEEEEECCCCCHHHEEEECCCCCCCCCEEEECCCCCCEEEEE TAGGARQSTDRGDYVMAYALP EECCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10594704 [H]