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The map label for this gene is ybiT [H]

Identifier: 77458834

GI number: 77458834

Start: 2986185

End: 2987771

Strand: Reverse

Name: ybiT [H]

Synonym: Pfl01_2609

Alternate gene names: 77458834

Gene position: 2987771-2986185 (Counterclockwise)

Preceding gene: 77458835

Following gene: 77458833

Centisome position: 46.41

GC content: 59.99

Gene sequence:

>1587_bases
TTGATCTCCACAGCCAACATCACCATGCAGTTCGGCGCCAAGCCGCTGTTTGAAAACGTTTCGGTCAAATTCAACGGCGG
CAACCGCTATGGCCTGATCGGCGCCAACGGTTGCGGCAAGTCGACCTTCATGAAAATCCTCGGCGGCGACCTCGAGCCGT
CCGGTGGCCAGGTCATGCTGGAGCCGAACGTACGCCTGGGTAAACTGCGCCAGGATCAGTTCGCCTACGAAGAATTCACC
GTGATCGACACCGTGATCATGGGTCACGAAGAGCTGTGGAAGGTCAAGGCCGAGCGCGACCGCATCTACTCGCTGCCGGA
AATGAGCGAAGAAGACGGCATGGCCGTGGCCGAGCTGGAAACCGAGTTCGCCGAGATGGACGGCTACACCGCCGAATCCC
GCGCCGGTGAACTGCTGCTGGGTCTGGGCATTCCGCTGGAACAGCATTTCGGTCCGATGACCGAAGTCGCGCCAGGCTGG
AAACTGCGTGTTCTGTTGGCTCAGGCACTGTTCTCCGATCCGGAAGTGCTGCTGCTCGACGAACCGACCAACCACCTGGA
CATCAACACCATCCGCTGGCTGGAAACGATTTTGACGGCGCGTAACAGCACCATGATCATCATTTCCCACGACCGTCACT
TCCTCAACAGCGTCTGCACCCACATGGCCGACCTGGACTACGGCGAGCTGCGTCTGTTCCCGGGCAACTACGACGAGTAC
ATGACCGCGGCGACCCAGTCCCGCGAGCAACTGCTGTCGGACAACGCCAAGAAGAAAGCCCAGATTGCCGAACTGCAAAC
GTTCGTCAGCCGCTTCTCGGCCAACGCCTCGAAAGCCAAGCAGGCCACTTCCCGCGCCAAGCAGATCGACAAGATCCAGC
TGGCCGAGGTCAAGCCATCGAGCCGCGTGAGCCCGTTCATCCGTTTCGAACAGACCAAGAAGCTGCACCGCCAGGCCGTG
ACCATCGAGCAGATGTCCAAGGGCTTCGACGGCAAGACTCTGTTCAAGAACTTCAGCTTTACCGTTGAAGCCGGCGAGCG
CGTGGCGATCATCGGCCCGAACGGTATCGGCAAGACCACCCTGCTGCGCACCCTGATGGGCGAACTGACCCCGGACACAG
GCTCGGTGAAGTGGACCGAAAGCGCGGAGCTGGGCTACTACGCTCAGGACCATGCCCACGACTTCGAAGAGGACGTCAGC
CTGTTCGACTGGATGGGTCAGTGGACTCAAGGCGAACAAGTGATCCGTGGCACCCTCGGTCGCATGCTGTTCTCCAACGA
CGAGATCCTCAAGTCGGTGAAGGTGATTTCCGGTGGTGAGCAAGGTCGCATGCTGTTCGGCAAGCTGATCCTGCAAAAGC
CGAACGTGCTGGTGATGGACGAACCGACCAACCACCTGGACATGGAATCGATCGAGGCGCTGAACCTGGCGCTGGAAAAC
TACCCGGGCACGCTGATCTTCGTCAGCCACGACCGTGAGTTCGTATCGTCCCTGGCCACGCGCATCATCGAGCTGAGCCC
GAATGGCGTGACCGACTTCAGCGGCACCTACGACGATTACCTGCGCAGCCAAGGCGTAGTGTTCTGA

Upstream 100 bases:

>100_bases
CTCCAGCGGCGATCAGGGAGAGATGTAAAAGCTCAAAATTGCCTCAGGAGTGGCCTCATCGCCAATCCTGAAGCCTGCAA
CCCATTGATAGGTAAAGTAA

Downstream 100 bases:

>100_bases
GTCGAATCGAGCGGTAAACAGAAAGCCCTGTCCTTGTGACGGGGCTTTTTTTGCGTTGAGGAAAAGATCGTTAGCCTGCT
TTCTTTTAGTTTGGCGCCAA

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 528

Protein sequence:

>528_residues
MISTANITMQFGAKPLFENVSVKFNGGNRYGLIGANGCGKSTFMKILGGDLEPSGGQVMLEPNVRLGKLRQDQFAYEEFT
VIDTVIMGHEELWKVKAERDRIYSLPEMSEEDGMAVAELETEFAEMDGYTAESRAGELLLGLGIPLEQHFGPMTEVAPGW
KLRVLLAQALFSDPEVLLLDEPTNHLDINTIRWLETILTARNSTMIIISHDRHFLNSVCTHMADLDYGELRLFPGNYDEY
MTAATQSREQLLSDNAKKKAQIAELQTFVSRFSANASKAKQATSRAKQIDKIQLAEVKPSSRVSPFIRFEQTKKLHRQAV
TIEQMSKGFDGKTLFKNFSFTVEAGERVAIIGPNGIGKTTLLRTLMGELTPDTGSVKWTESAELGYYAQDHAHDFEEDVS
LFDWMGQWTQGEQVIRGTLGRMLFSNDEILKSVKVISGGEQGRMLFGKLILQKPNVLVMDEPTNHLDMESIEALNLALEN
YPGTLIFVSHDREFVSSLATRIIELSPNGVTDFSGTYDDYLRSQGVVF

Sequences:

>Translated_528_residues
MISTANITMQFGAKPLFENVSVKFNGGNRYGLIGANGCGKSTFMKILGGDLEPSGGQVMLEPNVRLGKLRQDQFAYEEFT
VIDTVIMGHEELWKVKAERDRIYSLPEMSEEDGMAVAELETEFAEMDGYTAESRAGELLLGLGIPLEQHFGPMTEVAPGW
KLRVLLAQALFSDPEVLLLDEPTNHLDINTIRWLETILTARNSTMIIISHDRHFLNSVCTHMADLDYGELRLFPGNYDEY
MTAATQSREQLLSDNAKKKAQIAELQTFVSRFSANASKAKQATSRAKQIDKIQLAEVKPSSRVSPFIRFEQTKKLHRQAV
TIEQMSKGFDGKTLFKNFSFTVEAGERVAIIGPNGIGKTTLLRTLMGELTPDTGSVKWTESAELGYYAQDHAHDFEEDVS
LFDWMGQWTQGEQVIRGTLGRMLFSNDEILKSVKVISGGEQGRMLFGKLILQKPNVLVMDEPTNHLDMESIEALNLALEN
YPGTLIFVSHDREFVSSLATRIIELSPNGVTDFSGTYDDYLRSQGVVF
>Mature_528_residues
MISTANITMQFGAKPLFENVSVKFNGGNRYGLIGANGCGKSTFMKILGGDLEPSGGQVMLEPNVRLGKLRQDQFAYEEFT
VIDTVIMGHEELWKVKAERDRIYSLPEMSEEDGMAVAELETEFAEMDGYTAESRAGELLLGLGIPLEQHFGPMTEVAPGW
KLRVLLAQALFSDPEVLLLDEPTNHLDINTIRWLETILTARNSTMIIISHDRHFLNSVCTHMADLDYGELRLFPGNYDEY
MTAATQSREQLLSDNAKKKAQIAELQTFVSRFSANASKAKQATSRAKQIDKIQLAEVKPSSRVSPFIRFEQTKKLHRQAV
TIEQMSKGFDGKTLFKNFSFTVEAGERVAIIGPNGIGKTTLLRTLMGELTPDTGSVKWTESAELGYYAQDHAHDFEEDVS
LFDWMGQWTQGEQVIRGTLGRMLFSNDEILKSVKVISGGEQGRMLFGKLILQKPNVLVMDEPTNHLDMESIEALNLALEN
YPGTLIFVSHDREFVSSLATRIIELSPNGVTDFSGTYDDYLRSQGVVF

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=530, Percent_Identity=30.9433962264151, Blast_Score=273, Evalue=3e-73,
Organism=Homo sapiens, GI27881506, Length=539, Percent_Identity=29.8701298701299, Blast_Score=252, Evalue=7e-67,
Organism=Homo sapiens, GI10947137, Length=539, Percent_Identity=29.8701298701299, Blast_Score=252, Evalue=8e-67,
Organism=Homo sapiens, GI10947135, Length=540, Percent_Identity=30, Blast_Score=231, Evalue=2e-60,
Organism=Homo sapiens, GI69354671, Length=540, Percent_Identity=30, Blast_Score=230, Evalue=2e-60,
Organism=Escherichia coli, GI1787041, Length=529, Percent_Identity=73.7240075614367, Blast_Score=853, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=526, Percent_Identity=32.5095057034221, Blast_Score=306, Evalue=1e-84,
Organism=Escherichia coli, GI1787182, Length=537, Percent_Identity=32.0297951582868, Blast_Score=265, Evalue=8e-72,
Organism=Escherichia coli, GI2367384, Length=516, Percent_Identity=29.8449612403101, Blast_Score=231, Evalue=8e-62,
Organism=Escherichia coli, GI1788165, Length=194, Percent_Identity=29.3814432989691, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1788225, Length=216, Percent_Identity=28.7037037037037, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786398, Length=241, Percent_Identity=29.045643153527, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789891, Length=207, Percent_Identity=24.1545893719807, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87081791, Length=239, Percent_Identity=25.5230125523013, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1787029, Length=241, Percent_Identity=25.7261410788382, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI48994943, Length=244, Percent_Identity=29.0983606557377, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1787758, Length=243, Percent_Identity=25.5144032921811, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1788761, Length=249, Percent_Identity=22.8915662650602, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1789864, Length=244, Percent_Identity=23.7704918032787, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1788450, Length=236, Percent_Identity=26.6949152542373, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786698, Length=198, Percent_Identity=26.7676767676768, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790467, Length=220, Percent_Identity=22.7272727272727, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=540, Percent_Identity=30.7407407407407, Blast_Score=264, Evalue=1e-70,
Organism=Caenorhabditis elegans, GI17553372, Length=533, Percent_Identity=30.5816135084428, Blast_Score=254, Evalue=8e-68,
Organism=Caenorhabditis elegans, GI17559834, Length=542, Percent_Identity=29.520295202952, Blast_Score=252, Evalue=4e-67,
Organism=Saccharomyces cerevisiae, GI6320874, Length=535, Percent_Identity=32.5233644859813, Blast_Score=276, Evalue=6e-75,
Organism=Saccharomyces cerevisiae, GI6321121, Length=537, Percent_Identity=30.9124767225326, Blast_Score=259, Evalue=1e-69,
Organism=Saccharomyces cerevisiae, GI6323278, Length=393, Percent_Identity=26.972010178117, Blast_Score=132, Evalue=9e-32,
Organism=Saccharomyces cerevisiae, GI6324314, Length=393, Percent_Identity=26.972010178117, Blast_Score=129, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6325030, Length=422, Percent_Identity=24.4075829383886, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24666836, Length=530, Percent_Identity=29.811320754717, Blast_Score=271, Evalue=6e-73,
Organism=Drosophila melanogaster, GI24642252, Length=545, Percent_Identity=30.8256880733945, Blast_Score=271, Evalue=1e-72,
Organism=Drosophila melanogaster, GI18859989, Length=545, Percent_Identity=30.8256880733945, Blast_Score=271, Evalue=1e-72,
Organism=Drosophila melanogaster, GI24641342, Length=541, Percent_Identity=29.9445471349353, Blast_Score=258, Evalue=5e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58998; Mature: 58998

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTANITMQFGAKPLFENVSVKFNGGNRYGLIGANGCGKSTFMKILGGDLEPSGGQVML
CCCCEEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEE
EPNVRLGKLRQDQFAYEEFTVIDTVIMGHEELWKVKAERDRIYSLPEMSEEDGMAVAELE
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCCCCCCEEEHHH
TEFAEMDGYTAESRAGELLLGLGIPLEQHFGPMTEVAPGWKLRVLLAQALFSDPEVLLLD
HHHHHHCCCCCCCCCCCEEEECCCCHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCEEEEE
EPTNHLDINTIRWLETILTARNSTMIIISHDRHFLNSVCTHMADLDYGELRLFPGNYDEY
CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEECCCCHHHH
MTAATQSREQLLSDNAKKKAQIAELQTFVSRFSANASKAKQATSRAKQIDKIQLAEVKPS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCC
SRVSPFIRFEQTKKLHRQAVTIEQMSKGFDGKTLFKNFSFTVEAGERVAIIGPNGIGKTT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEECCCEEEEECCCCCCHHH
LLRTLMGELTPDTGSVKWTESAELGYYAQDHAHDFEEDVSLFDWMGQWTQGEQVIRGTLG
HHHHHHHHCCCCCCCEEECCCCCCCCEECHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
RMLFSNDEILKSVKVISGGEQGRMLFGKLILQKPNVLVMDEPTNHLDMESIEALNLALEN
HHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHC
YPGTLIFVSHDREFVSSLATRIIELSPNGVTDFSGTYDDYLRSQGVVF
CCCEEEEEECCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MISTANITMQFGAKPLFENVSVKFNGGNRYGLIGANGCGKSTFMKILGGDLEPSGGQVML
CCCCEEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEE
EPNVRLGKLRQDQFAYEEFTVIDTVIMGHEELWKVKAERDRIYSLPEMSEEDGMAVAELE
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCCCCCCEEEHHH
TEFAEMDGYTAESRAGELLLGLGIPLEQHFGPMTEVAPGWKLRVLLAQALFSDPEVLLLD
HHHHHHCCCCCCCCCCCEEEECCCCHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCEEEEE
EPTNHLDINTIRWLETILTARNSTMIIISHDRHFLNSVCTHMADLDYGELRLFPGNYDEY
CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEECCCCHHHH
MTAATQSREQLLSDNAKKKAQIAELQTFVSRFSANASKAKQATSRAKQIDKIQLAEVKPS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCC
SRVSPFIRFEQTKKLHRQAVTIEQMSKGFDGKTLFKNFSFTVEAGERVAIIGPNGIGKTT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEECCCEEEEECCCCCCHHH
LLRTLMGELTPDTGSVKWTESAELGYYAQDHAHDFEEDVSLFDWMGQWTQGEQVIRGTLG
HHHHHHHHCCCCCCCEEECCCCCCCCEECHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
RMLFSNDEILKSVKVISGGEQGRMLFGKLILQKPNVLVMDEPTNHLDMESIEALNLALEN
HHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHC
YPGTLIFVSHDREFVSSLATRIIELSPNGVTDFSGTYDDYLRSQGVVF
CCCEEEEEECCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]