| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458823
Identifier: 77458823
GI number: 77458823
Start: 2976405
End: 2976854
Strand: Reverse
Name: 77458823
Synonym: Pfl01_2598
Alternate gene names: NA
Gene position: 2976854-2976405 (Counterclockwise)
Preceding gene: 77458824
Following gene: 77458822
Centisome position: 46.24
GC content: 58.0
Gene sequence:
>450_bases GTGGGGAATATCAATAAAGCCTTCACCTGCCTTCTGCTGATCGGATCAGCTGCCAGCACTTTCCTCAGTTTCAACGTTCA GGCCGAAGGCAATGGCGTGATCGTACTCAATCGTGATGTCCAGCCGATCCCGATCGGCCGAAGCGGTGGCAAAGACCCGT ACCCCACCACCGTCAATGCCAATCCTTCGGGCCGCATCGATCAAGCGATGACCAGCACCGAACTCAACGACGGTGAATTT GCCAGTGTAGCCAGCGGATCCTCGATTCGCGGAAGTATCACCACCCCGACTTCGAACATCCCCGGCATGAACACTGTGAC CAATCCGAATGGCTTGCCTGGTATGGGAGGCGGTCACGGCGGCGGTGCCGGTGGCTCGATCTCCAATACCGTCAACCGTG CCATGAGCTCCGGTCTTGCCCCTCTGACTCGCATGGCTGGAGGCCAATAA
Upstream 100 bases:
>100_bases AACGCATTGAAATTTAAAGATATTTCAAAAGCGGCACAGCTTTCGCTCTCTCCTTCACAACGCTGAACAGGCTCAGCCCA CTGAAGAAGGAATTGCCGTC
Downstream 100 bases:
>100_bases ATGAACCACTCTCTGCTCCTGCTCGCCCTCCTCGGCTGCACCAGCGCAATGGCTGACCCGAGTTCCGTGAACAACGCGAA CATTCAGGAAACCGGAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MGNINKAFTCLLLIGSAASTFLSFNVQAEGNGVIVLNRDVQPIPIGRSGGKDPYPTTVNANPSGRIDQAMTSTELNDGEF ASVASGSSIRGSITTPTSNIPGMNTVTNPNGLPGMGGGHGGGAGGSISNTVNRAMSSGLAPLTRMAGGQ
Sequences:
>Translated_149_residues MGNINKAFTCLLLIGSAASTFLSFNVQAEGNGVIVLNRDVQPIPIGRSGGKDPYPTTVNANPSGRIDQAMTSTELNDGEF ASVASGSSIRGSITTPTSNIPGMNTVTNPNGLPGMGGGHGGGAGGSISNTVNRAMSSGLAPLTRMAGGQ >Mature_148_residues GNINKAFTCLLLIGSAASTFLSFNVQAEGNGVIVLNRDVQPIPIGRSGGKDPYPTTVNANPSGRIDQAMTSTELNDGEFA SVASGSSIRGSITTPTSNIPGMNTVTNPNGLPGMGGGHGGGAGGSISNTVNRAMSSGLAPLTRMAGGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14850; Mature: 14719
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNINKAFTCLLLIGSAASTFLSFNVQAEGNGVIVLNRDVQPIPIGRSGGKDPYPTTVNA CCCHHHHHEEEHHHCCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEECC NPSGRIDQAMTSTELNDGEFASVASGSSIRGSITTPTSNIPGMNTVTNPNGLPGMGGGHG CCCCCCCHHHHHCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC GGAGGSISNTVNRAMSSGLAPLTRMAGGQ CCCCCCHHHHHHHHHHCCCCHHHHHCCCC >Mature Secondary Structure GNINKAFTCLLLIGSAASTFLSFNVQAEGNGVIVLNRDVQPIPIGRSGGKDPYPTTVNA CCHHHHHEEEHHHCCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEECC NPSGRIDQAMTSTELNDGEFASVASGSSIRGSITTPTSNIPGMNTVTNPNGLPGMGGGHG CCCCCCCHHHHHCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC GGAGGSISNTVNRAMSSGLAPLTRMAGGQ CCCCCCHHHHHHHHHHCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA