| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is luxC [H]
Identifier: 77458783
GI number: 77458783
Start: 2929701
End: 2932151
Strand: Reverse
Name: luxC [H]
Synonym: Pfl01_2558
Alternate gene names: 77458783
Gene position: 2932151-2929701 (Counterclockwise)
Preceding gene: 77458784
Following gene: 77458782
Centisome position: 45.54
GC content: 63.81
Gene sequence:
>2451_bases ATGTACCTGATCAACGGACAACTTCACGATGACTGCACCCTCGACGTCGCGCTGCAACAGCTGGACCTGGATTTGCCACA ACGATTGGCCAGGGCGCTCGATACAACGACTGTGCTTGGCGCAGCAGCCATTTTTGCCGAACGTCTGCAAGACCCGGACA TGGCAATGCCCATCGAACCCGAGCAACGCCAGGCACTGATCGGGTTCTGCCAGCCGGACGCGCTGCGGCGCAAGCTTGAG CGCGAACTCGGCGAGCAACCGGGCAGCCTGCGTCGCCTCGACTATCGCCAGTCACGCTTTGAACGCTGGAGCCCGCTGGG CCTGGTGGTTCACATCACCCCCGGCAATGCACCGTTGCTGGCCTTCTGCGCGGTGATCGAAGGCCTGCTGGCGGGCAACG TCAACTGGTTGCGTCCCAGCAGCAGCGATCAGGGGCTGACGGCTCAATTGCTTCATGGCTTGGCGCAGTGCGATGCGACC GGCCAGATCGCCGGGCATATCGCGGTCGTTCCTGCCAGCACCGCCCAGGTCGGCCAATTGTGCCAACGAGCCAACGGCGT GTCGGCGTGGGGCGGTGAATCGGCGCTGCAAGCCATCCGTCAGCAACTGGCGCCCGGATGTCGCTGGATCGACTGGGGTC ATCGCATCAGCTTCATCTACCTGACTCCGGCAGCGGCCACGCCAGAAGCGCTGGACGCCGTGGCCGATGAAGTCTGCCGT CTGGACCAGCAGGCCTGCTCCAGTCCGCAATGGCTGCTGGTGGACAGTGACGACGAAAGCATCCTGCGCGCCATCGGCAA TGACCTGGCCGAGGCGTTCGAGCGTCGATCCCGACACTGGCCGGTTCTGCTGCCTTCGATTCAGGAGGCCTCTGAAATCA CCACCCGCACGGCGATGGCGCGACTGGCCCAGAGCTTCTCCGAGGTCGACGGCCAGGTCTGGCAGGCACCGGACTGGCGC GTCATCTGGACCCACGACCAGCAACTTGCGCCCTCGCCGCTGTTTCGCAGCCTGTTGCTCAAGCCACTGCCACGGGCGCA GGTCAGCGAGCAGCTGTTGCCCTGGCGCAACGTACTGCAAAGCGCCGGGCTGATGTGTGCAGAACACGAAACGGCTGAAC TAGCTCAAACACTGATCGCCGCGGGTGTCACGAGGATCACCCCGGTGCAAGCGATTCACGATGGCTACGAAGGCGAACCC CACGACGGCGTATATGCATTGCAGCGCCTGAGCCGGCGCGTATCGGTCAGCCTGCCGGCCATGGCGCTGGCAACCCGCGC CACGCTCGATCCTCTGCCGACGCCACCCTGCGTGGCCAATCTGCCGATCATGAGCAAAGACGCCTTTGTCACCCGCCCGA TCCACCCGGCGGCCCGCTTGTACTTCCGCTCCGGCGGCAGCAGCGGCATCCCGGCGTTGTCCGGCTTCAGCTACCGCGAC TTCGATCGGCAGATGCGTGCCAGTGCCGACGGTTTGTTCGCGGCGGGTCTCGACCCGAGCCGCGACCGGGTGATGAACCT GTTCTTCAGCGGCGGGTTGTATGGCGGTTTCTTCAGTTTTTCCAAAGTGCTGGAACTGCTGGGTGCCACGCACCTGCCGA TGGGGGCACCGGCCGATGACGATTACCGCGAGATCGCGCAGATCATCATCGATCAGCGGGTCACCGTGCTGGTCGGCATG CCCAGCACCCTGCACCGCTTGTTCCTCAACGAGCAGGCACGGCTGCGCGAATATGGCGGGATCGAAAAAGTCTTCCTCGG TGGCGAACACCCCGGTGAACAAAGCCTCGCACTGATGCGCGACTGCGGCGTCGGGCTGATCCGCTCGGCCATTTACGGCA GTGTCGACGCCGGGCCGCTCGGCCATGCCTGCCCCGCTACAGGCGATGGCGTGTTTCATCTGATGAGCGATATCCAGCAC CTGGAGATTGTGGAATTCGAGTCTGATCGACCGGTGACCGACGGTGAAACCGGGCGTCTGGTGTTCACTTCCATCGAGCG CGAAGGACAGGACGTGCAGCGCTACAACGTCGGTGACAGCGGTCGCTGGCTGCCCGGTGCGTGTGACTGCGGGCTGCCCA CGCCGCGCTTCGAACTGCTGCAACGTCACGGCAGATTGATGCGCATCGGCACCGACTTCATCTGCCTCTCGCAACTGGCA GAGCATCTGCAGACCGACTTCCAGCTGATCCTCGAACACGCCCCGGACGGCCTGGAGCGCATGCGCTTTCGCAGCCCACG GCAACCCGATGATGTTCAGCGTCGCCTGCTGGACTATCCGACCTTGACCACTCTTATCCAGACAGGGCTGCTGACCGTTG AGGTAGAGGTCTGCGGCAGCGACGGCTTTACCCGCAACAAACACAGCGGCAAGACGCCGCTGCTGATCGACAACCGGGGC ATTGGCCCCTGCGCAGACAGGCAAGGAGCCAATCATGAACACACGGTTTGA
Upstream 100 bases:
>100_bases GGTCTATCCACCGACTGGTTCGAACTGCATGGCCGTGCGGCCACCACGGCCGGCCGAAGCTGCGCGATGGCCGCTTCTGA ACTATTGGAGAAGCACTGAT
Downstream 100 bases:
>100_bases ACTGCAAGAGCTGATCACGTTTGCGCGACAGCATTCCGGGTTTTATACGCGTCACTTCGCTGCACTTCCCCAACCGATCA CAGCCCTGGAACAACTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 816; Mature: 816
Protein sequence:
>816_residues MYLINGQLHDDCTLDVALQQLDLDLPQRLARALDTTTVLGAAAIFAERLQDPDMAMPIEPEQRQALIGFCQPDALRRKLE RELGEQPGSLRRLDYRQSRFERWSPLGLVVHITPGNAPLLAFCAVIEGLLAGNVNWLRPSSSDQGLTAQLLHGLAQCDAT GQIAGHIAVVPASTAQVGQLCQRANGVSAWGGESALQAIRQQLAPGCRWIDWGHRISFIYLTPAAATPEALDAVADEVCR LDQQACSSPQWLLVDSDDESILRAIGNDLAEAFERRSRHWPVLLPSIQEASEITTRTAMARLAQSFSEVDGQVWQAPDWR VIWTHDQQLAPSPLFRSLLLKPLPRAQVSEQLLPWRNVLQSAGLMCAEHETAELAQTLIAAGVTRITPVQAIHDGYEGEP HDGVYALQRLSRRVSVSLPAMALATRATLDPLPTPPCVANLPIMSKDAFVTRPIHPAARLYFRSGGSSGIPALSGFSYRD FDRQMRASADGLFAAGLDPSRDRVMNLFFSGGLYGGFFSFSKVLELLGATHLPMGAPADDDYREIAQIIIDQRVTVLVGM PSTLHRLFLNEQARLREYGGIEKVFLGGEHPGEQSLALMRDCGVGLIRSAIYGSVDAGPLGHACPATGDGVFHLMSDIQH LEIVEFESDRPVTDGETGRLVFTSIEREGQDVQRYNVGDSGRWLPGACDCGLPTPRFELLQRHGRLMRIGTDFICLSQLA EHLQTDFQLILEHAPDGLERMRFRSPRQPDDVQRRLLDYPTLTTLIQTGLLTVEVEVCGSDGFTRNKHSGKTPLLIDNRG IGPCADRQGANHEHTV
Sequences:
>Translated_816_residues MYLINGQLHDDCTLDVALQQLDLDLPQRLARALDTTTVLGAAAIFAERLQDPDMAMPIEPEQRQALIGFCQPDALRRKLE RELGEQPGSLRRLDYRQSRFERWSPLGLVVHITPGNAPLLAFCAVIEGLLAGNVNWLRPSSSDQGLTAQLLHGLAQCDAT GQIAGHIAVVPASTAQVGQLCQRANGVSAWGGESALQAIRQQLAPGCRWIDWGHRISFIYLTPAAATPEALDAVADEVCR LDQQACSSPQWLLVDSDDESILRAIGNDLAEAFERRSRHWPVLLPSIQEASEITTRTAMARLAQSFSEVDGQVWQAPDWR VIWTHDQQLAPSPLFRSLLLKPLPRAQVSEQLLPWRNVLQSAGLMCAEHETAELAQTLIAAGVTRITPVQAIHDGYEGEP HDGVYALQRLSRRVSVSLPAMALATRATLDPLPTPPCVANLPIMSKDAFVTRPIHPAARLYFRSGGSSGIPALSGFSYRD FDRQMRASADGLFAAGLDPSRDRVMNLFFSGGLYGGFFSFSKVLELLGATHLPMGAPADDDYREIAQIIIDQRVTVLVGM PSTLHRLFLNEQARLREYGGIEKVFLGGEHPGEQSLALMRDCGVGLIRSAIYGSVDAGPLGHACPATGDGVFHLMSDIQH LEIVEFESDRPVTDGETGRLVFTSIEREGQDVQRYNVGDSGRWLPGACDCGLPTPRFELLQRHGRLMRIGTDFICLSQLA EHLQTDFQLILEHAPDGLERMRFRSPRQPDDVQRRLLDYPTLTTLIQTGLLTVEVEVCGSDGFTRNKHSGKTPLLIDNRG IGPCADRQGANHEHTV >Mature_816_residues MYLINGQLHDDCTLDVALQQLDLDLPQRLARALDTTTVLGAAAIFAERLQDPDMAMPIEPEQRQALIGFCQPDALRRKLE RELGEQPGSLRRLDYRQSRFERWSPLGLVVHITPGNAPLLAFCAVIEGLLAGNVNWLRPSSSDQGLTAQLLHGLAQCDAT GQIAGHIAVVPASTAQVGQLCQRANGVSAWGGESALQAIRQQLAPGCRWIDWGHRISFIYLTPAAATPEALDAVADEVCR LDQQACSSPQWLLVDSDDESILRAIGNDLAEAFERRSRHWPVLLPSIQEASEITTRTAMARLAQSFSEVDGQVWQAPDWR VIWTHDQQLAPSPLFRSLLLKPLPRAQVSEQLLPWRNVLQSAGLMCAEHETAELAQTLIAAGVTRITPVQAIHDGYEGEP HDGVYALQRLSRRVSVSLPAMALATRATLDPLPTPPCVANLPIMSKDAFVTRPIHPAARLYFRSGGSSGIPALSGFSYRD FDRQMRASADGLFAAGLDPSRDRVMNLFFSGGLYGGFFSFSKVLELLGATHLPMGAPADDDYREIAQIIIDQRVTVLVGM PSTLHRLFLNEQARLREYGGIEKVFLGGEHPGEQSLALMRDCGVGLIRSAIYGSVDAGPLGHACPATGDGVFHLMSDIQH LEIVEFESDRPVTDGETGRLVFTSIEREGQDVQRYNVGDSGRWLPGACDCGLPTPRFELLQRHGRLMRIGTDFICLSQLA EHLQTDFQLILEHAPDGLERMRFRSPRQPDDVQRRLLDYPTLTTLIQTGLLTVEVEVCGSDGFTRNKHSGKTPLLIDNRG IGPCADRQGANHEHTV
Specific function: LuxC is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the luxC family [H]
Homologues:
Organism=Escherichia coli, GI1787664, Length=258, Percent_Identity=29.4573643410853, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016162 - InterPro: IPR008670 [H]
Pfam domain/function: PF05893 LuxC [H]
EC number: =1.2.1.50 [H]
Molecular weight: Translated: 89651; Mature: 89651
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLINGQLHDDCTLDVALQQLDLDLPQRLARALDTTTVLGAAAIFAERLQDPDMAMPIEP CEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC EQRQALIGFCQPDALRRKLERELGEQPGSLRRLDYRQSRFERWSPLGLVVHITPGNAPLL HHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH AFCAVIEGLLAGNVNWLRPSSSDQGLTAQLLHGLAQCDATGQIAGHIAVVPASTAQVGQL HHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHH CQRANGVSAWGGESALQAIRQQLAPGCRWIDWGHRISFIYLTPAAATPEALDAVADEVCR HHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHH LDQQACSSPQWLLVDSDDESILRAIGNDLAEAFERRSRHWPVLLPSIQEASEITTRTAMA HHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH RLAQSFSEVDGQVWQAPDWRVIWTHDQQLAPSPLFRSLLLKPLPRAQVSEQLLPWRNVLQ HHHHHHHHHCCCEECCCCCEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH SAGLMCAEHETAELAQTLIAAGVTRITPVQAIHDGYEGEPHDGVYALQRLSRRVSVSLPA HCCCEECCCHHHHHHHHHHHHCCHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCH MALATRATLDPLPTPPCVANLPIMSKDAFVTRPIHPAARLYFRSGGSSGIPALSGFSYRD HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHEECCCCCCCCCCCCCCHHH FDRQMRASADGLFAAGLDPSRDRVMNLFFSGGLYGGFFSFSKVLELLGATHLPMGAPADD HHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC DYREIAQIIIDQRVTVLVGMPSTLHRLFLNEQARLREYGGIEKVFLGGEHPGEQSLALMR HHHHHHHHHHHCCEEEEEECCHHHHHHHHCCHHHHHHHCCCEEEEECCCCCCHHHHHHHH DCGVGLIRSAIYGSVDAGPLGHACPATGDGVFHLMSDIQHLEIVEFESDRPVTDGETGRL HCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCE VFTSIEREGQDVQRYNVGDSGRWLPGACDCGLPTPRFELLQRHGRLMRIGTDFICLSQLA EEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHH EHLQTDFQLILEHAPDGLERMRFRSPRQPDDVQRRLLDYPTLTTLIQTGLLTVEVEVCGS HHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCEEEEEEEECC DGFTRNKHSGKTPLLIDNRGIGPCADRQGANHEHTV CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYLINGQLHDDCTLDVALQQLDLDLPQRLARALDTTTVLGAAAIFAERLQDPDMAMPIEP CEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC EQRQALIGFCQPDALRRKLERELGEQPGSLRRLDYRQSRFERWSPLGLVVHITPGNAPLL HHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH AFCAVIEGLLAGNVNWLRPSSSDQGLTAQLLHGLAQCDATGQIAGHIAVVPASTAQVGQL HHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHH CQRANGVSAWGGESALQAIRQQLAPGCRWIDWGHRISFIYLTPAAATPEALDAVADEVCR HHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHH LDQQACSSPQWLLVDSDDESILRAIGNDLAEAFERRSRHWPVLLPSIQEASEITTRTAMA HHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH RLAQSFSEVDGQVWQAPDWRVIWTHDQQLAPSPLFRSLLLKPLPRAQVSEQLLPWRNVLQ HHHHHHHHHCCCEECCCCCEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH SAGLMCAEHETAELAQTLIAAGVTRITPVQAIHDGYEGEPHDGVYALQRLSRRVSVSLPA HCCCEECCCHHHHHHHHHHHHCCHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCH MALATRATLDPLPTPPCVANLPIMSKDAFVTRPIHPAARLYFRSGGSSGIPALSGFSYRD HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHEECCCCCCCCCCCCCCHHH FDRQMRASADGLFAAGLDPSRDRVMNLFFSGGLYGGFFSFSKVLELLGATHLPMGAPADD HHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC DYREIAQIIIDQRVTVLVGMPSTLHRLFLNEQARLREYGGIEKVFLGGEHPGEQSLALMR HHHHHHHHHHHCCEEEEEECCHHHHHHHHCCHHHHHHHCCCEEEEECCCCCCHHHHHHHH DCGVGLIRSAIYGSVDAGPLGHACPATGDGVFHLMSDIQHLEIVEFESDRPVTDGETGRL HCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCE VFTSIEREGQDVQRYNVGDSGRWLPGACDCGLPTPRFELLQRHGRLMRIGTDFICLSQLA EEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHH EHLQTDFQLILEHAPDGLERMRFRSPRQPDDVQRRLLDYPTLTTLIQTGLLTVEVEVCGS HHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCEEEEEEEECC DGFTRNKHSGKTPLLIDNRGIGPCADRQGANHEHTV CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3347497 [H]