| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fabG [H]
Identifier: 77458693
GI number: 77458693
Start: 2821523
End: 2822287
Strand: Reverse
Name: fabG [H]
Synonym: Pfl01_2468
Alternate gene names: 77458693
Gene position: 2822287-2821523 (Counterclockwise)
Preceding gene: 77458696
Following gene: 77458692
Centisome position: 43.84
GC content: 63.01
Gene sequence:
>765_bases ATGACCGACTTCAAGAACAGCACCCCAAACGAAGTGGCCGGTAAAGTCGCACTGGTCACTGGCGCGGCCAGTGGCATCGG CAAGGCCATCGCACTGCTGCTGCATGCCCGCGGCGCCCAGGTCATTGCTGAAGATATAAACCCTGAGGTGGAAGCACTGG CCCGCCCCGGCCTGGTCCCCCTGGTGGCCGACATCACTCAGGACGGGGCAGCCGAACGCGCGGTCGCCCTGGCCGTCGAG CAATTCGGACGGCTGGACATTCTGGTCAACAACGCCGGCATCATCATCAACAAACTGGTCATCGACATGACCCGCGAAGA CTGGGAACGCATTCAGGCGGTCAACGCCACGGCGGCCTTTTTGCATAGCCGGGAGGCGGTCAAAGCGATGATGCCCAACA AGTCCGGATCGATCGTCAACATCGCGTCCTACGCCTCCTATTTCGCCTTCCCCACCATTGCCGCCTACACCGCCTCCAAG GGCGCGCTGGCCCAACTGACGCGCACCCTGGCGCTTGAAGTCATTGGCCACGGCATCCGGGTCAATGCTGTCGGTGTCGG CGATGTGGTGACCAACATCCTTAACAATGTGGTCGACGACGGCCCTGCCTTTCTCGCCCAACATGGGGAAGCGGCACCGA TCGGCCGCGCCGCCCAACCGGAAGAAATCGCCGAAGTGGTCGCGTTCATCGCCTCGGATCGGGCCAGTTTCATGGTCGGT TCGGTGGTCATGGCCGACGGCGGCATGACGGTCACGGCCGGCTGA
Upstream 100 bases:
>100_bases CCTCACTCCGCTGCGAGACAGTAGGCCCGTCGCCGATGACAGCGCCTCGCCGGCGCCAACACGGCTTATCCCTACTCGAT CAAAAACGCTGGAGAACATC
Downstream 100 bases:
>100_bases GCCGCAGCACAAACGCGCCGCACGGCATGCCCGACCAGCCCGAGAGGATCAGGCAAATCTGCGGCAGTTTCGTCCTAACA CCGCTGCGCTCGGCTACGTA
Product: Short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTDFKNSTPNEVAGKVALVTGAASGIGKAIALLLHARGAQVIAEDINPEVEALARPGLVPLVADITQDGAAERAVALAVE QFGRLDILVNNAGIIINKLVIDMTREDWERIQAVNATAAFLHSREAVKAMMPNKSGSIVNIASYASYFAFPTIAAYTASK GALAQLTRTLALEVIGHGIRVNAVGVGDVVTNILNNVVDDGPAFLAQHGEAAPIGRAAQPEEIAEVVAFIASDRASFMVG SVVMADGGMTVTAG
Sequences:
>Translated_254_residues MTDFKNSTPNEVAGKVALVTGAASGIGKAIALLLHARGAQVIAEDINPEVEALARPGLVPLVADITQDGAAERAVALAVE QFGRLDILVNNAGIIINKLVIDMTREDWERIQAVNATAAFLHSREAVKAMMPNKSGSIVNIASYASYFAFPTIAAYTASK GALAQLTRTLALEVIGHGIRVNAVGVGDVVTNILNNVVDDGPAFLAQHGEAAPIGRAAQPEEIAEVVAFIASDRASFMVG SVVMADGGMTVTAG >Mature_253_residues TDFKNSTPNEVAGKVALVTGAASGIGKAIALLLHARGAQVIAEDINPEVEALARPGLVPLVADITQDGAAERAVALAVEQ FGRLDILVNNAGIIINKLVIDMTREDWERIQAVNATAAFLHSREAVKAMMPNKSGSIVNIASYASYFAFPTIAAYTASKG ALAQLTRTLALEVIGHGIRVNAVGVGDVVTNILNNVVDDGPAFLAQHGEAAPIGRAAQPEEIAEVVAFIASDRASFMVGS VVMADGGMTVTAG
Specific function: Catalyzes A Reversible Reduction Of 5-Ketoglutanate To Form D-Gluconate. Dependent On Nadp, Almost Inactive With NAD. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI7705925, Length=242, Percent_Identity=33.4710743801653, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI15277342, Length=256, Percent_Identity=32.421875, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI32483357, Length=250, Percent_Identity=34, Blast_Score=111, Evalue=7e-25, Organism=Homo sapiens, GI19923817, Length=256, Percent_Identity=28.90625, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI66933014, Length=248, Percent_Identity=33.0645161290323, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI5031737, Length=240, Percent_Identity=32.9166666666667, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI4504505, Length=190, Percent_Identity=31.0526315789474, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI40254992, Length=241, Percent_Identity=28.6307053941909, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=30, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI4758504, Length=253, Percent_Identity=33.201581027668, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI59889578, Length=203, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI10190704, Length=255, Percent_Identity=30.9803921568627, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI31542939, Length=201, Percent_Identity=31.8407960199005, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=35.2331606217617, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI126723191, Length=195, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI109715829, Length=245, Percent_Identity=27.7551020408163, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI20149619, Length=226, Percent_Identity=30.0884955752212, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI7706318, Length=201, Percent_Identity=30.3482587064677, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI83715985, Length=253, Percent_Identity=31.6205533596838, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4503817, Length=239, Percent_Identity=25.1046025104602, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI224922801, Length=173, Percent_Identity=31.2138728323699, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI40807363, Length=205, Percent_Identity=28.2926829268293, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI142976729, Length=219, Percent_Identity=26.4840182648402, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI40254986, Length=195, Percent_Identity=30.2564102564103, Blast_Score=66, Evalue=2e-11, Organism=Escherichia coli, GI1790717, Length=247, Percent_Identity=35.6275303643725, Blast_Score=137, Evalue=6e-34, Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=37.5510204081633, Blast_Score=134, Evalue=4e-33, Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=34.7826086956522, Blast_Score=131, Evalue=3e-32, Organism=Escherichia coli, GI87082160, Length=246, Percent_Identity=34.9593495934959, Blast_Score=131, Evalue=6e-32, Organism=Escherichia coli, GI1788459, Length=250, Percent_Identity=33.6, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1789208, Length=243, Percent_Identity=32.5102880658436, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=34.4, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI2367175, Length=249, Percent_Identity=36.144578313253, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI1787905, Length=251, Percent_Identity=31.8725099601594, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1789378, Length=247, Percent_Identity=31.9838056680162, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI2367365, Length=235, Percent_Identity=33.6170212765957, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1789057, Length=264, Percent_Identity=25.3787878787879, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1787820, Length=237, Percent_Identity=26.1603375527426, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1786701, Length=192, Percent_Identity=30.2083333333333, Blast_Score=66, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193204405, Length=269, Percent_Identity=34.9442379182156, Blast_Score=138, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17531453, Length=261, Percent_Identity=33.3333333333333, Blast_Score=131, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=32.9545454545455, Blast_Score=131, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17562908, Length=268, Percent_Identity=33.955223880597, Blast_Score=125, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17562990, Length=263, Percent_Identity=31.1787072243346, Blast_Score=121, Evalue=3e-28, Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=34.5528455284553, Blast_Score=121, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17560220, Length=269, Percent_Identity=32.3420074349442, Blast_Score=120, Evalue=5e-28, Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=33.6032388663968, Blast_Score=120, Evalue=6e-28, Organism=Caenorhabditis elegans, GI17551412, Length=271, Percent_Identity=33.5793357933579, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17559104, Length=264, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17538480, Length=267, Percent_Identity=32.2097378277154, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17562910, Length=270, Percent_Identity=30.7407407407407, Blast_Score=117, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17560150, Length=266, Percent_Identity=30.8270676691729, Blast_Score=117, Evalue=6e-27, Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=32.1969696969697, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI72000259, Length=268, Percent_Identity=32.4626865671642, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=33.0827067669173, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17563726, Length=263, Percent_Identity=31.9391634980989, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17562904, Length=264, Percent_Identity=31.0606060606061, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=31.5175097276265, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17565030, Length=267, Percent_Identity=32.5842696629214, Blast_Score=107, Evalue=7e-24, Organism=Caenorhabditis elegans, GI115534694, Length=249, Percent_Identity=35.3413654618474, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI25147288, Length=248, Percent_Identity=30.6451612903226, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17560676, Length=246, Percent_Identity=30.8943089430894, Blast_Score=103, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17538486, Length=266, Percent_Identity=30.4511278195489, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI212645366, Length=255, Percent_Identity=32.156862745098, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=32.5490196078431, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17564282, Length=218, Percent_Identity=29.3577981651376, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17555706, Length=248, Percent_Identity=30.6451612903226, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17538182, Length=261, Percent_Identity=31.0344827586207, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17568967, Length=184, Percent_Identity=32.6086956521739, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17536025, Length=266, Percent_Identity=33.8345864661654, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI193203117, Length=246, Percent_Identity=26.0162601626016, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI193203115, Length=247, Percent_Identity=25.9109311740891, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71997099, Length=247, Percent_Identity=29.1497975708502, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17508895, Length=168, Percent_Identity=30.952380952381, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17561272, Length=256, Percent_Identity=28.125, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17508651, Length=249, Percent_Identity=25.7028112449799, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71982365, Length=196, Percent_Identity=27.0408163265306, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193207185, Length=143, Percent_Identity=31.4685314685315, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=185, Percent_Identity=30.8108108108108, Blast_Score=89, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6324126, Length=258, Percent_Identity=26.3565891472868, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323882, Length=193, Percent_Identity=33.6787564766839, Blast_Score=66, Evalue=5e-12, Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=37.3983739837398, Blast_Score=131, Evalue=5e-31, Organism=Drosophila melanogaster, GI24644339, Length=251, Percent_Identity=35.8565737051793, Blast_Score=128, Evalue=4e-30, Organism=Drosophila melanogaster, GI24639444, Length=246, Percent_Identity=35.7723577235772, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI28571526, Length=259, Percent_Identity=33.976833976834, Blast_Score=118, Evalue=4e-27, Organism=Drosophila melanogaster, GI21357041, Length=259, Percent_Identity=31.6602316602317, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI21355319, Length=257, Percent_Identity=32.6848249027237, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI24643142, Length=252, Percent_Identity=34.5238095238095, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24644337, Length=174, Percent_Identity=34.4827586206897, Blast_Score=97, Evalue=9e-21, Organism=Drosophila melanogaster, GI18859837, Length=239, Percent_Identity=29.7071129707113, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI17737361, Length=251, Percent_Identity=31.0756972111554, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24649181, Length=177, Percent_Identity=32.2033898305085, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI21358495, Length=209, Percent_Identity=28.7081339712919, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28571387, Length=197, Percent_Identity=28.9340101522843, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI24641232, Length=214, Percent_Identity=28.0373831775701, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI21355631, Length=176, Percent_Identity=27.8409090909091, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI21357673, Length=194, Percent_Identity=30.4123711340206, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26269; Mature: 26138
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFKNSTPNEVAGKVALVTGAASGIGKAIALLLHARGAQVIAEDINPEVEALARPGLVP CCCCCCCCCHHHHCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCHH LVADITQDGAAERAVALAVEQFGRLDILVNNAGIIINKLVIDMTREDWERIQAVNATAAF HHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH LHSREAVKAMMPNKSGSIVNIASYASYFAFPTIAAYTASKGALAQLTRTLALEVIGHGIR HHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEE VNAVGVGDVVTNILNNVVDDGPAFLAQHGEAAPIGRAAQPEEIAEVVAFIASDRASFMVG EEEEEHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH SVVMADGGMTVTAG EEEEECCCEEEECC >Mature Secondary Structure TDFKNSTPNEVAGKVALVTGAASGIGKAIALLLHARGAQVIAEDINPEVEALARPGLVP CCCCCCCCHHHHCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCHH LVADITQDGAAERAVALAVEQFGRLDILVNNAGIIINKLVIDMTREDWERIQAVNATAAF HHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH LHSREAVKAMMPNKSGSIVNIASYASYFAFPTIAAYTASKGALAQLTRTLALEVIGHGIR HHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEE VNAVGVGDVVTNILNNVVDDGPAFLAQHGEAAPIGRAAQPEEIAEVVAFIASDRASFMVG EEEEEHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH SVVMADGGMTVTAG EEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]