Click here to switch to the map view.

The map label for this gene is yebS [H]

Identifier: 77458666

GI number: 77458666

Start: 2793815

End: 2794411

Strand: Reverse

Name: yebS [H]

Synonym: Pfl01_2441

Alternate gene names: 77458666

Gene position: 2794411-2793815 (Counterclockwise)

Preceding gene: 77458667

Following gene: 77458665

Centisome position: 43.4

GC content: 60.64

Gene sequence:

>597_bases
ATGGCCAGCACCGATCAACTGATCATCTGCGAGCATTGCGACTGCGTGTACGAAAAAGTCGTGCTGGCCAAACACCAGAA
GACCCTCTGCGTGCGTTGCGGCGCCGTGCTCCAGCGCTACAACAACCTGAGCGTGGAGCAACGGCTGGCCCTGAGCTTCA
CCGCGGCGATGCTGTGGCTGTTCGCCAATTTCTACCCGGTGATGAGCATCAGCATGAAGGGCCTGAAAAACAGCGCGACC
CTCTGGGATTCAGTGCTGGCCCTGAGTCAGGGGCCGATCACCTTCATGGCGATGGTCGCGGCAATCTCGATCATCATCGC
CCCGGCCTTCCAGTTGGTTCTGTTGATCTGGGTCTTGAGCTTCGCCCTCGCCTCGCGCCGTTCACCGGGGTTCAAGCTGT
GCATGCGCTGGCTGGAAACCTTGCGGCCGTGGAGCATGCTCGAAGTGTGTTTGCTTGGCGCAATGGTGGCGGTGTTCAAA
CTGGCGGGCATGCTCGACGTCATTCCCGGCATCGGCCTGTTTGCCTTGGCCGTGCTCAGCCTGTTGCTGATCCGCATCGC
CGGGCGCGACGTGCGTGAACTGTGGGACATCCTATGA

Upstream 100 bases:

>100_bases
GATTTCATCGCCCCACGCGCGTTTCGCAAGGTGACAGTTGTTGAATGCCCCTGCGCTTCTATAGTGAAAGGGTTCAAGTT
CTCCTCCCGCCGAGCGCCCC

Downstream 100 bases:

>100_bases
AACGGCCACCGACTGCCAGCGAACTCAACCTGTGCCTGTGCCACAGCTGCGGACTGGCCTGCGACATGACCGGCGAACCG
CACCAATGCCCGCGCTGCGA

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MASTDQLIICEHCDCVYEKVVLAKHQKTLCVRCGAVLQRYNNLSVEQRLALSFTAAMLWLFANFYPVMSISMKGLKNSAT
LWDSVLALSQGPITFMAMVAAISIIIAPAFQLVLLIWVLSFALASRRSPGFKLCMRWLETLRPWSMLEVCLLGAMVAVFK
LAGMLDVIPGIGLFALAVLSLLLIRIAGRDVRELWDIL

Sequences:

>Translated_198_residues
MASTDQLIICEHCDCVYEKVVLAKHQKTLCVRCGAVLQRYNNLSVEQRLALSFTAAMLWLFANFYPVMSISMKGLKNSAT
LWDSVLALSQGPITFMAMVAAISIIIAPAFQLVLLIWVLSFALASRRSPGFKLCMRWLETLRPWSMLEVCLLGAMVAVFK
LAGMLDVIPGIGLFALAVLSLLLIRIAGRDVRELWDIL
>Mature_197_residues
ASTDQLIICEHCDCVYEKVVLAKHQKTLCVRCGAVLQRYNNLSVEQRLALSFTAAMLWLFANFYPVMSISMKGLKNSATL
WDSVLALSQGPITFMAMVAAISIIIAPAFQLVLLIWVLSFALASRRSPGFKLCMRWLETLRPWSMLEVCLLGAMVAVFKL
AGMLDVIPGIGLFALAVLSLLLIRIAGRDVRELWDIL

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=188, Percent_Identity=25, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 22010; Mature: 21879

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTDQLIICEHCDCVYEKVVLAKHQKTLCVRCGAVLQRYNNLSVEQRLALSFTAAMLWL
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FANFYPVMSISMKGLKNSATLWDSVLALSQGPITFMAMVAAISIIIAPAFQLVLLIWVLS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALASRRSPGFKLCMRWLETLRPWSMLEVCLLGAMVAVFKLAGMLDVIPGIGLFALAVLS
HHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LLLIRIAGRDVRELWDIL
HHHHHHCCCHHHHHHCCC
>Mature Secondary Structure 
ASTDQLIICEHCDCVYEKVVLAKHQKTLCVRCGAVLQRYNNLSVEQRLALSFTAAMLWL
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FANFYPVMSISMKGLKNSATLWDSVLALSQGPITFMAMVAAISIIIAPAFQLVLLIWVLS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALASRRSPGFKLCMRWLETLRPWSMLEVCLLGAMVAVFKLAGMLDVIPGIGLFALAVLS
HHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LLLIRIAGRDVRELWDIL
HHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]