Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77458636

Identifier: 77458636

GI number: 77458636

Start: 2767675

End: 2768367

Strand: Reverse

Name: 77458636

Synonym: Pfl01_2409

Alternate gene names: NA

Gene position: 2768367-2767675 (Counterclockwise)

Preceding gene: 77458637

Following gene: 77458635

Centisome position: 43.0

GC content: 60.61

Gene sequence:

>693_bases
ATGACGAGCCGCGAACTACTCCATAGCAAAGGCTACACCCTGCTCTTTGGAGCAGTTCCGACCATGTGGCTGGCCGCCCT
TCGCCTCGCTTTCGATACCGGTATCAAACCCTCAAACGAATGGCCCGTGCCCCGCGGCATCGATTGGCGCCATTCGCAGC
TGGACACTGACCCGGTTGTTCAGGCCCTCTGCCGATTGCCACCACTGCTGGCGGTGGTGGGCGAGTTGATCGGCGAACGC
TTCTTCCTCTCTCAGGTCGAGGGCCGCGAACCGCTCATCAATGGCGGCCACCAACAACTGCACCGCGACTTGTCGGCGCA
ACGCCCCGGCGACACCGTCAACGCGCTGGTGTACCTCGACGATTACGGCCCGGAAAACGGTGCAACCCGCATCGTCCCCG
GCAGCCATCGCCCTGCTCTGAGCGAGCCCCCATTCGATTTCACTGACGAGTCCCGATCCGTGCAGCTGACGGGCAGCGCG
GGCGACATCCTGATCTTCGATGCCGACCTGATCCACGCCGGCAGCTTGAACTCCAGCGGTGCAGCCCGACGAACCCTGTT
GATTACCTGGTTTTCCGAATCGCTCTACTCAACGCATCTGGAAACGGTGAGCCTCAGAAACATAAAAATGGACACGACCG
AGCGGTTCGATCCGGGAGACTTTGCGTTCGGGATCGTGGAATCATTCATTTGA

Upstream 100 bases:

>100_bases
CGATTGTCTTGGGGTTACGGCAGCGATACCGAGGTTCGCGTTGGCTTGATCACGATCGGCAATACTCGCCCTGATTGTAC
AAAGGGAGACTGATGAAGCC

Downstream 100 bases:

>100_bases
CTTGATTGCCTTAGGCAACTATATAGTTGCCTAAGGCAAATATATGAGCATACCGTAATGTCCACAATCACCGACCGCGC
CGACATCGTTCGGCAATTCA

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Deoxygenase

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MTSRELLHSKGYTLLFGAVPTMWLAALRLAFDTGIKPSNEWPVPRGIDWRHSQLDTDPVVQALCRLPPLLAVVGELIGER
FFLSQVEGREPLINGGHQQLHRDLSAQRPGDTVNALVYLDDYGPENGATRIVPGSHRPALSEPPFDFTDESRSVQLTGSA
GDILIFDADLIHAGSLNSSGAARRTLLITWFSESLYSTHLETVSLRNIKMDTTERFDPGDFAFGIVESFI

Sequences:

>Translated_230_residues
MTSRELLHSKGYTLLFGAVPTMWLAALRLAFDTGIKPSNEWPVPRGIDWRHSQLDTDPVVQALCRLPPLLAVVGELIGER
FFLSQVEGREPLINGGHQQLHRDLSAQRPGDTVNALVYLDDYGPENGATRIVPGSHRPALSEPPFDFTDESRSVQLTGSA
GDILIFDADLIHAGSLNSSGAARRTLLITWFSESLYSTHLETVSLRNIKMDTTERFDPGDFAFGIVESFI
>Mature_229_residues
TSRELLHSKGYTLLFGAVPTMWLAALRLAFDTGIKPSNEWPVPRGIDWRHSQLDTDPVVQALCRLPPLLAVVGELIGERF
FLSQVEGREPLINGGHQQLHRDLSAQRPGDTVNALVYLDDYGPENGATRIVPGSHRPALSEPPFDFTDESRSVQLTGSAG
DILIFDADLIHAGSLNSSGAARRTLLITWFSESLYSTHLETVSLRNIKMDTTERFDPGDFAFGIVESFI

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25401; Mature: 25270

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRELLHSKGYTLLFGAVPTMWLAALRLAFDTGIKPSNEWPVPRGIDWRHSQLDTDPVV
CCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH
QALCRLPPLLAVVGELIGERFFLSQVEGREPLINGGHQQLHRDLSAQRPGDTVNALVYLD
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEE
DYGPENGATRIVPGSHRPALSEPPFDFTDESRSVQLTGSAGDILIFDADLIHAGSLNSSG
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCEEECCCCCCCC
AARRTLLITWFSESLYSTHLETVSLRNIKMDTTERFDPGDFAFGIVESFI
CCCEEEEEEEHHHHHHHHHHHHEEECEEEECCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TSRELLHSKGYTLLFGAVPTMWLAALRLAFDTGIKPSNEWPVPRGIDWRHSQLDTDPVV
CCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH
QALCRLPPLLAVVGELIGERFFLSQVEGREPLINGGHQQLHRDLSAQRPGDTVNALVYLD
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEE
DYGPENGATRIVPGSHRPALSEPPFDFTDESRSVQLTGSAGDILIFDADLIHAGSLNSSG
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCEEECCCCCCCC
AARRTLLITWFSESLYSTHLETVSLRNIKMDTTERFDPGDFAFGIVESFI
CCCEEEEEEEHHHHHHHHHHHHEEECEEEECCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA