Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yqfN [H]

Identifier: 77458617

GI number: 77458617

Start: 2749783

End: 2750478

Strand: Direct

Name: yqfN [H]

Synonym: Pfl01_2390

Alternate gene names: 77458617

Gene position: 2749783-2750478 (Clockwise)

Preceding gene: 77458616

Following gene: 77458618

Centisome position: 42.71

GC content: 64.37

Gene sequence:

>696_bases
TTGAACGAACAGACATTGTCCATGCGCCTGGAGCGGGTGGCGGCGCACGTGCCCGCCGATGCGCGGCTGGCCGATATCGG
CTCGGATCACGGTTACCTGCCGGTGGCCCTGATGCGCCGTGGCGCGATCGCGGCGGCGGTGGCGGGCGAGATGGCCGAGA
CGCCGTTCCGTTCGGCGCAACGCACCGTGCGCGGAAACGATCTTGAGCAGCAGATTACCGTACGCCTGGCCAATGGCTTG
ATGGCCGTCGAACCGGAAGACGGGATCACGGAAATTACCGTGTGTGGCATGGGCGGCGAAACCATCCGCGACATTCTCGA
AGCCGGCAAGGCGCGTCTCAGCGGCCGCGAGCGTCTGATCCTGCAACCCAACGGCGGCGAACAACCGCTGCGCCAATGGC
TGATGGACAACGACTACCGAATCCTCTGCGAAGAAGTCCTGCGCGAGAACCGCTTCGACTACGAAATCATCGTGGCCGAG
CGGGGCGGGCCGGTTTCCTATACCGCCGAGGAACTGTACTTCGGGCCGCTGCAGTTGCAGGCACGCAGTCCGGCGTTTGT
CTCAAAGTGGCAGCACCGGTTGCGGCACAAGCAGCAGACACTGGCTCATTTCGGGCGGGCACGGCATGCCGTTTGCGAGC
GCAAGGTGCAGGATCTGACGCAGCAAGTGCGCTGGATCACTGACGTGCTGGGGTGA

Upstream 100 bases:

>100_bases
GCGGTTGGTCACATAAATTTGAAATGCCCGCCGTTGCCCCCCAGAATCGCGCCCCGATCCGGCCACCAGCGCCGGGCGTT
CAGAGTGAAAGGGGTTGCGG

Downstream 100 bases:

>100_bases
AGCACGCCCAACGCTGATATCATCCAACCACTTTCAAGCAGGCCAAAAAACACCATGAACCGTCAGAAAAAACTGCAACA
GCTCTTCAAGGAAAAATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MNEQTLSMRLERVAAHVPADARLADIGSDHGYLPVALMRRGAIAAAVAGEMAETPFRSAQRTVRGNDLEQQITVRLANGL
MAVEPEDGITEITVCGMGGETIRDILEAGKARLSGRERLILQPNGGEQPLRQWLMDNDYRILCEEVLRENRFDYEIIVAE
RGGPVSYTAEELYFGPLQLQARSPAFVSKWQHRLRHKQQTLAHFGRARHAVCERKVQDLTQQVRWITDVLG

Sequences:

>Translated_231_residues
MNEQTLSMRLERVAAHVPADARLADIGSDHGYLPVALMRRGAIAAAVAGEMAETPFRSAQRTVRGNDLEQQITVRLANGL
MAVEPEDGITEITVCGMGGETIRDILEAGKARLSGRERLILQPNGGEQPLRQWLMDNDYRILCEEVLRENRFDYEIIVAE
RGGPVSYTAEELYFGPLQLQARSPAFVSKWQHRLRHKQQTLAHFGRARHAVCERKVQDLTQQVRWITDVLG
>Mature_231_residues
MNEQTLSMRLERVAAHVPADARLADIGSDHGYLPVALMRRGAIAAAVAGEMAETPFRSAQRTVRGNDLEQQITVRLANGL
MAVEPEDGITEITVCGMGGETIRDILEAGKARLSGRERLILQPNGGEQPLRQWLMDNDYRILCEEVLRENRFDYEIIVAE
RGGPVSYTAEELYFGPLQLQARSPAFVSKWQHRLRHKQQTLAHFGRARHAVCERKVQDLTQQVRWITDVLG

Specific function: Unknown

COG id: COG2384

COG function: function code R; Predicted SAM-dependent methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006901 [H]

Pfam domain/function: PF04816 DUF633 [H]

EC number: NA

Molecular weight: Translated: 25984; Mature: 25984

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEQTLSMRLERVAAHVPADARLADIGSDHGYLPVALMRRGAIAAAVAGEMAETPFRSAQ
CCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHCHHHHHH
RTVRGNDLEQQITVRLANGLMAVEPEDGITEITVCGMGGETIRDILEAGKARLSGRERLI
HHHCCCCHHHHHHHHHHCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEE
LQPNGGEQPLRQWLMDNDYRILCEEVLRENRFDYEIIVAERGGPVSYTAEELYFGPLQLQ
ECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCEEHHHHEECCEEEE
ARSPAFVSKWQHRLRHKQQTLAHFGRARHAVCERKVQDLTQQVRWITDVLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNEQTLSMRLERVAAHVPADARLADIGSDHGYLPVALMRRGAIAAAVAGEMAETPFRSAQ
CCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHCHHHHHH
RTVRGNDLEQQITVRLANGLMAVEPEDGITEITVCGMGGETIRDILEAGKARLSGRERLI
HHHCCCCHHHHHHHHHHCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEE
LQPNGGEQPLRQWLMDNDYRILCEEVLRENRFDYEIIVAERGGPVSYTAEELYFGPLQLQ
ECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCEEHHHHEECCEEEE
ARSPAFVSKWQHRLRHKQQTLAHFGRARHAVCERKVQDLTQQVRWITDVLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]