| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is aguA [H]
Identifier: 77458600
GI number: 77458600
Start: 2731789
End: 2732907
Strand: Direct
Name: aguA [H]
Synonym: Pfl01_2373
Alternate gene names: 77458600
Gene position: 2731789-2732907 (Clockwise)
Preceding gene: 77458599
Following gene: 77458604
Centisome position: 42.43
GC content: 63.0
Gene sequence:
>1119_bases ATGCCGACTCGTCGCGAGTTCATCAAACAGGTTTCAGTCGCCGTCGGTGCAGGCGCTGCCGTCATGGGTCTTGGCCTGTC CCCGGCGCGGGTACTGGCGGCCAGTGAAGGTCGCTGGTTCATGCCCGACGAGGGCGACAAGCACGAACGCGCCTACATGG CCTTCGGCGCGCAGGACGCGATCTGGGAAGACTTCACCGAAGACGTCCAGGAAGCCCTGGGCCGAATCGCCCGCGCCATC GCCCGCTATGAACCGCTGACCATCTACTGCCGCAGCGGCGAGCGCAGCCTGGCCGAAGAGATTTGCGGCAGCTCCAACAT CACCTACCAGATCGCCAACCTCGACGACATCTGGATGCGCGACATCAGCGCCAACTTCGTCATCGATGACAAGAACGGCC TGGGCGCGGTGGACTTCAACTTCAGCGGCTGGGGCAACAAGCAACAGCATTCGAAGGACGCGAAGATCGCCAAACGCGTG GCGGCCGATGCGCAGGCGACCTACCAGCGCAGCGAACTGGTGGGCGAGGGCGGCGGCATCGAAGTCGACGGTCACGGCAC CGCGATCATGACCGAAAGCTGCTGGGTCAACGAAAACCGCAACCCCGGCTGGAGCAAGGCCGACGTCGAGGCGGAACTGA AAGCACGCCTCGGTCTGCGCAAGATCATCTGGCTGCCGGGCATCAAGGGCAAGGACATCACCGACGCCCACGTCGATTTC TACGCGCGCTTCGTCACGCCCGGCGTGGTGATCGCCAACCTCGACACCGACCCGCGCTCCTACGACAACAAGGTCACCCT GGCGCACCTGGAAATCCTGAAGAAAGCCACCGACGCCGACGGTCGTCCGTTGCAGATCCACACCGTGTCGCCACCGCTGA AACCGCGCAAGACCAAGTTCAACAAGGACAACGACGATTTCGCGGCCGGTTACATCAACTATTTCGTGATCAACGGCGCG GTGATCGCTCCGGAGTTCGGCGACAAGGACGCCGACAAGAAGGCCTTCGACCTGCTGAAAAAGCTCTACCCGAACCGCGA CGTGGTGCAGATCAACATCGACGCCATCGCGGCCGGTGGTGGCGGGATTCACTGCGTGACCAGTCACCAGCCGGCGTAA
Upstream 100 bases:
>100_bases TGCGCGCCCGCATGCGCACCTGGACCAAGTTCAAGACTGCCACTGCCAAGTGATTTTTCCGGGCCGCCCCGGCGGCCCCT TACCCATCAGGAACGTACAC
Downstream 100 bases:
>100_bases GGCTCAGCGTCTGCGCACCGCCACGCATTTGATTTCCACCAGCAGCCCCGGATGGGCCAGCTCGCTGACACCGATGCAGG TCCAGGCGCAGAAGCCTTTG
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: Agmatine iminohydrolase [H]
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MPTRREFIKQVSVAVGAGAAVMGLGLSPARVLAASEGRWFMPDEGDKHERAYMAFGAQDAIWEDFTEDVQEALGRIARAI ARYEPLTIYCRSGERSLAEEICGSSNITYQIANLDDIWMRDISANFVIDDKNGLGAVDFNFSGWGNKQQHSKDAKIAKRV AADAQATYQRSELVGEGGGIEVDGHGTAIMTESCWVNENRNPGWSKADVEAELKARLGLRKIIWLPGIKGKDITDAHVDF YARFVTPGVVIANLDTDPRSYDNKVTLAHLEILKKATDADGRPLQIHTVSPPLKPRKTKFNKDNDDFAAGYINYFVINGA VIAPEFGDKDADKKAFDLLKKLYPNRDVVQINIDAIAAGGGGIHCVTSHQPA
Sequences:
>Translated_372_residues MPTRREFIKQVSVAVGAGAAVMGLGLSPARVLAASEGRWFMPDEGDKHERAYMAFGAQDAIWEDFTEDVQEALGRIARAI ARYEPLTIYCRSGERSLAEEICGSSNITYQIANLDDIWMRDISANFVIDDKNGLGAVDFNFSGWGNKQQHSKDAKIAKRV AADAQATYQRSELVGEGGGIEVDGHGTAIMTESCWVNENRNPGWSKADVEAELKARLGLRKIIWLPGIKGKDITDAHVDF YARFVTPGVVIANLDTDPRSYDNKVTLAHLEILKKATDADGRPLQIHTVSPPLKPRKTKFNKDNDDFAAGYINYFVINGA VIAPEFGDKDADKKAFDLLKKLYPNRDVVQINIDAIAAGGGGIHCVTSHQPA >Mature_371_residues PTRREFIKQVSVAVGAGAAVMGLGLSPARVLAASEGRWFMPDEGDKHERAYMAFGAQDAIWEDFTEDVQEALGRIARAIA RYEPLTIYCRSGERSLAEEICGSSNITYQIANLDDIWMRDISANFVIDDKNGLGAVDFNFSGWGNKQQHSKDAKIAKRVA ADAQATYQRSELVGEGGGIEVDGHGTAIMTESCWVNENRNPGWSKADVEAELKARLGLRKIIWLPGIKGKDITDAHVDFY ARFVTPGVVIANLDTDPRSYDNKVTLAHLEILKKATDADGRPLQIHTVSPPLKPRKTKFNKDNDDFAAGYINYFVINGAV IAPEFGDKDADKKAFDLLKKLYPNRDVVQINIDAIAAGGGGIHCVTSHQPA
Specific function: Unknown
COG id: COG2957
COG function: function code E; Peptidylarginine deiminase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the agmatine deiminase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017754 - InterPro: IPR007466 [H]
Pfam domain/function: PF04371 PAD_porph [H]
EC number: =3.5.3.12 [H]
Molecular weight: Translated: 40766; Mature: 40635
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTRREFIKQVSVAVGAGAAVMGLGLSPARVLAASEGRWFMPDEGDKHERAYMAFGAQDA CCCHHHHHHHHHHHHCCCHHEEECCCCHHHEEEECCCCEECCCCCCCCCEEEEEECCCHH IWEDFTEDVQEALGRIARAIARYEPLTIYCRSGERSLAEEICGSSNITYQIANLDDIWMR HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCEEEECCCCHHHHH DISANFVIDDKNGLGAVDFNFSGWGNKQQHSKDAKIAKRVAADAQATYQRSELVGEGGGI HCCCEEEEECCCCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE EVDGHGTAIMTESCWVNENRNPGWSKADVEAELKARLGLRKIIWLPGIKGKDITDAHVDF EECCCCCEEEECCEEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHH YARFVTPGVVIANLDTDPRSYDNKVTLAHLEILKKATDADGRPLQIHTVSPPLKPRKTKF HHHHCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC NKDNDDFAAGYINYFVINGAVIAPEFGDKDADKKAFDLLKKLYPNRDVVQINIDAIAAGG CCCCCCHHHHEEEEEEEECEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECC GGIHCVTSHQPA CCEEEEECCCCC >Mature Secondary Structure PTRREFIKQVSVAVGAGAAVMGLGLSPARVLAASEGRWFMPDEGDKHERAYMAFGAQDA CCHHHHHHHHHHHHCCCHHEEECCCCHHHEEEECCCCEECCCCCCCCCEEEEEECCCHH IWEDFTEDVQEALGRIARAIARYEPLTIYCRSGERSLAEEICGSSNITYQIANLDDIWMR HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCEEEECCCCHHHHH DISANFVIDDKNGLGAVDFNFSGWGNKQQHSKDAKIAKRVAADAQATYQRSELVGEGGGI HCCCEEEEECCCCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE EVDGHGTAIMTESCWVNENRNPGWSKADVEAELKARLGLRKIIWLPGIKGKDITDAHVDF EECCCCCEEEECCEEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHH YARFVTPGVVIANLDTDPRSYDNKVTLAHLEILKKATDADGRPLQIHTVSPPLKPRKTKF HHHHCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC NKDNDDFAAGYINYFVINGAVIAPEFGDKDADKKAFDLLKKLYPNRDVVQINIDAIAAGG CCCCCCHHHHEEEEEEEECEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECC GGIHCVTSHQPA CCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]