| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is maeN [H]
Identifier: 77458584
GI number: 77458584
Start: 2715252
End: 2716157
Strand: Reverse
Name: maeN [H]
Synonym: Pfl01_2357
Alternate gene names: 77458584
Gene position: 2716157-2715252 (Counterclockwise)
Preceding gene: 77458586
Following gene: 77458582
Centisome position: 42.19
GC content: 63.02
Gene sequence:
>906_bases ATGAGCGACTCCCTTGAGCAATCCCTGAACGTCGACGGCCCGCGCGCCGACGGCATCATCCAGCGCCTGCGCACCTACGA GATCGGCGTCATCCCGCTGCCGATCTTCCTCGGCATCGCCGTGATCGTGTTTCTGTCGGCCCACCTCGGCTTTCTGCCGA AGAACATGATCGGTGGACTGGCCGTGATCATGACCATGGGCGTGTTCTTCGGCCAGATGGGCTCGCGTCTGCCGATCCTC AGGGAAATCGGTGGCGGCGCCATCCTGTGCCTGATGCTGCCGTCGGTGCTGGTGTTCTACGGCTTCTTCGGCGCGCCGAC GATCGACGCGACCAAAATGCTGATGAAGGAAGCCAACTTCCTGTACTTCGTGATCGCCAGCCTGGTGGTCGGCAGCATCC TGGGCATGAGCCGGTTCATTCTGGTCCAGGGCATGATCCGCATGTTCATCCCCTTGCTGGCCGGCACCCTGGCCGCCGTC GCGAGCGGGCTGATCGTCGGCAAGCTTGCCGGCTACAGCGCTTACCACACGTTCTTTTTCATCATCGTGCCGATCATCGG CGGCGGCATCGGCGAAGGCATCCTGCCGCTGTCCCTGGCCTATTCGACGATCCTCGGCGGCACGCCGGACATCTATGTCG CGCAACTGGTCCCGGCGGCCGTGGTCGGCAACATTGCAGCGATCATCTGCGCCGGTTACCTGGCACGGCTGGCGCTGAAA CGCCCGGCCATCAACGGTGAAGGGGCGCTGATTCGGGCGAAAGCCGAAAACGATAAATTCAAGGTCAGGATGAGTCCGCC ACCGCCATCGACCTGCGACTCATGGGCGCTGGCGTGCTGGTCATCTGTGCGTTCTTCTTGCTCGGTGGCCTGCTGGAAAA GGTCGTCGGGATTCCGGGGCCGGTGA
Upstream 100 bases:
>100_bases TTTGCGAAGGATACCATCGAATCACCGCCTCGCCACCCGAGCCCGGTGCACCGTGGTTTCCCGTCAATCCTCGATAAAAA CAAACATGAGGACATGCGTC
Downstream 100 bases:
>100_bases TGATGATTCTCGCGGCGGTGCTGTTCAAATACGTGCGCGTGCTGCCGGAGAAGCTGGAAAAAGGCGCGCAGTCTTTCTAC AAACTGGTGTCCGCCGCCTT
Product: citrate carrier protein
Products: NA
Alternate protein names: Sodium-dependent malate transporter [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSDSLEQSLNVDGPRADGIIQRLRTYEIGVIPLPIFLGIAVIVFLSAHLGFLPKNMIGGLAVIMTMGVFFGQMGSRLPIL REIGGGAILCLMLPSVLVFYGFFGAPTIDATKMLMKEANFLYFVIASLVVGSILGMSRFILVQGMIRMFIPLLAGTLAAV ASGLIVGKLAGYSAYHTFFFIIVPIIGGGIGEGILPLSLAYSTILGGTPDIYVAQLVPAAVVGNIAAIICAGYLARLALK RPAINGEGALIRAKAENDKFKVRMSPPPPSTCDSWALACWSSVRSSCSVACWKRSSGFRGR
Sequences:
>Translated_301_residues MSDSLEQSLNVDGPRADGIIQRLRTYEIGVIPLPIFLGIAVIVFLSAHLGFLPKNMIGGLAVIMTMGVFFGQMGSRLPIL REIGGGAILCLMLPSVLVFYGFFGAPTIDATKMLMKEANFLYFVIASLVVGSILGMSRFILVQGMIRMFIPLLAGTLAAV ASGLIVGKLAGYSAYHTFFFIIVPIIGGGIGEGILPLSLAYSTILGGTPDIYVAQLVPAAVVGNIAAIICAGYLARLALK RPAINGEGALIRAKAENDKFKVRMSPPPPSTCDSWALACWSSVRSSCSVACWKRSSGFRGR >Mature_300_residues SDSLEQSLNVDGPRADGIIQRLRTYEIGVIPLPIFLGIAVIVFLSAHLGFLPKNMIGGLAVIMTMGVFFGQMGSRLPILR EIGGGAILCLMLPSVLVFYGFFGAPTIDATKMLMKEANFLYFVIASLVVGSILGMSRFILVQGMIRMFIPLLAGTLAAVA SGLIVGKLAGYSAYHTFFFIIVPIIGGGIGEGILPLSLAYSTILGGTPDIYVAQLVPAAVVGNIAAIICAGYLARLALKR PAINGEGALIRAKAENDKFKVRMSPPPPSTCDSWALACWSSVRSSCSVACWKRSSGFRGR
Specific function: Acts as a Na(+)-malate symporter, as it catalyzes malate-dependent uptake of Na(+) and Na(+)-dependent uptake of malate [H]
COG id: COG3493
COG function: function code C; Na+/citrate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:citrate (SCF) symporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004679 - InterPro: IPR018025 [H]
Pfam domain/function: PF03390 2HCT [H]
EC number: NA
Molecular weight: Translated: 31910; Mature: 31778
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSLEQSLNVDGPRADGIIQRLRTYEIGVIPLPIFLGIAVIVFLSAHLGFLPKNMIGGL CCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AVIMTMGVFFGQMGSRLPILREIGGGAILCLMLPSVLVFYGFFGAPTIDATKMLMKEANF HHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH LYFVIASLVVGSILGMSRFILVQGMIRMFIPLLAGTLAAVASGLIVGKLAGYSAYHTFFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH IIVPIIGGGIGEGILPLSLAYSTILGGTPDIYVAQLVPAAVVGNIAAIICAGYLARLALK HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPAINGEGALIRAKAENDKFKVRMSPPPPSTCDSWALACWSSVRSSCSVACWKRSSGFRG CCCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEHHEECCCCCCC R C >Mature Secondary Structure SDSLEQSLNVDGPRADGIIQRLRTYEIGVIPLPIFLGIAVIVFLSAHLGFLPKNMIGGL CCCHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AVIMTMGVFFGQMGSRLPILREIGGGAILCLMLPSVLVFYGFFGAPTIDATKMLMKEANF HHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH LYFVIASLVVGSILGMSRFILVQGMIRMFIPLLAGTLAAVASGLIVGKLAGYSAYHTFFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH IIVPIIGGGIGEGILPLSLAYSTILGGTPDIYVAQLVPAAVVGNIAAIICAGYLARLALK HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPAINGEGALIRAKAENDKFKVRMSPPPPSTCDSWALACWSSVRSSCSVACWKRSSGFRG CCCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEHHEECCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377; 10903309; 12949159 [H]