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The map label for this gene is pqqE [H]

Identifier: 77458579

GI number: 77458579

Start: 2711216

End: 2712679

Strand: Reverse

Name: pqqE [H]

Synonym: Pfl01_2352

Alternate gene names: 77458579

Gene position: 2712679-2711216 (Counterclockwise)

Preceding gene: 77458580

Following gene: 77458575

Centisome position: 42.13

GC content: 63.59

Gene sequence:

>1464_bases
ATGACAGACAACCGCCCTGCCCGCTACCTCAGCGACACCGATCTCAAACGCTACGTGCCGGTGCACGTGGTCTGGGAAAT
CACCCTCGCCTGCGACCTCAAGTGTCTGCATTGCGGCTCCCGCGCGGGGCATCGGCGTCCCAATGAACTCAACACCCGCG
AATGCCTCGAGGTGATCGATTCCCTCGCCGCCCTCGGCACCCGCGAGATCACCCTGATCGGCGGCGAAGCCTATTTGCGC
AAGGACTGGACGCAACTGATCCGCGCCATCCACGACCATGGCATGTACTGCGCGATCCAGACCGGTGGGCGCAATCTCAC
ACCGGCGAAGATGCAGGCAGCGGTCGATGCCGGGCTCAACGGGGTCGGCATTTCCCTGGACGGCCTCGCGCCGCTGCACG
ACAAGGTGCGCAACGTGTCCGGTTCGTTCGACAAGGCTGTGGACACCCTGCGCCGGGCCAAGGCGTCGGGGCTGGCGGTG
AGCGTCAACACACAGATCGGCGCGGCCACGTTGCCGGACCTGCCGGAGCTGATGGACACCATCATCGAGCTCGGCGCCAC
CCATTGGCAGATCCAGATCACGGTGGCCATGGGCAACGCCGTCGACCATCCGGAACTGTTGCTCCAGCCGTATAAGCTGC
TGGAAGTGATGCCGCTGCTGGCCCGGTTGTATCGCGAAGGACTGGATCGCGGATTGCTGATGAACGTCGGCAATAACATC
GGTTATTACGGCCCTTACGAACATCTGTGGCGCGGCTTCGGTGATGAGCGCGTGCACTGGAGCGGCTGCGCCGCCGGCCA
GACCGTGCTGGCGCTGGAAGCGGACGGCACGGTGAAAGGTTGCCCGTCACTGGCGACCGTCGGTTTTTCCGGCGGCAACG
TGCGCAACATGAGCCTGCACGATATCTGGCACTACAGCGAAGGCATGCACTTCGGCCGCCTGCGCTCGGTCGATGATCTG
TGGGGCTACTGCCGAAGCTGCTATTACAACGACGTCTGCCGGGGCGGCTGCACCTGGACGTCGCACTCGCTGCTGGGAAA
ACCCGGCAACAATCCTTACTGCCACTACCGAACCCTGGAATTGCAGAAACAGGGTTTGCGCGAGCGCATCGTCAAAGTCG
AGGACGCCGCCCAGCGCTCGTTTGCGGTCGGACGTTTTGACCTGATCACTGAACGCATCGACACCGGCGAAAAAGTCAGC
AGCGTCAGCGACAGCGGGCAAGTGATCAAACTGGCCTGGATCAATCAGGGCCAGTCGTCCCCCGAGGAAGGACGCCTGCC
GACGCAACTGGCCCTGTGCCGCGACTGCCTGCAATACATCCACCCCCACGAATCGATCTGCCCGCACTGCCGCGCCGATG
TCGCCGCCGCCGAGGCCCGGCACCTGAACGACCGGGCCCGGCAGCAGGCAATCATGAAGACGCTGACCGGTTTACTGGCG
GGAGTGCCGAGTTCATTGAGTTGA

Upstream 100 bases:

>100_bases
GTACGGCCCGGGCGCGGTCCTGGGTGACCGCGCCCGGTCTTCCTGCCCATCGAGGTCAGTCCAATCGTGCCGCGCACAGG
CCCGTGCGCAAGGATCTCCC

Downstream 100 bases:

>100_bases
GACGGCGGCGGGTGCCGTTCGCCCGTCTTTCGGGCTTCTTCGGTCGCTCTGATTCTCGGGGCCATCGCTGAAAAAGCCCG
GAAAGTCTGACCGGCGCTGC

Product: radical SAM family protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MTDNRPARYLSDTDLKRYVPVHVVWEITLACDLKCLHCGSRAGHRRPNELNTRECLEVIDSLAALGTREITLIGGEAYLR
KDWTQLIRAIHDHGMYCAIQTGGRNLTPAKMQAAVDAGLNGVGISLDGLAPLHDKVRNVSGSFDKAVDTLRRAKASGLAV
SVNTQIGAATLPDLPELMDTIIELGATHWQIQITVAMGNAVDHPELLLQPYKLLEVMPLLARLYREGLDRGLLMNVGNNI
GYYGPYEHLWRGFGDERVHWSGCAAGQTVLALEADGTVKGCPSLATVGFSGGNVRNMSLHDIWHYSEGMHFGRLRSVDDL
WGYCRSCYYNDVCRGGCTWTSHSLLGKPGNNPYCHYRTLELQKQGLRERIVKVEDAAQRSFAVGRFDLITERIDTGEKVS
SVSDSGQVIKLAWINQGQSSPEEGRLPTQLALCRDCLQYIHPHESICPHCRADVAAAEARHLNDRARQQAIMKTLTGLLA
GVPSSLS

Sequences:

>Translated_487_residues
MTDNRPARYLSDTDLKRYVPVHVVWEITLACDLKCLHCGSRAGHRRPNELNTRECLEVIDSLAALGTREITLIGGEAYLR
KDWTQLIRAIHDHGMYCAIQTGGRNLTPAKMQAAVDAGLNGVGISLDGLAPLHDKVRNVSGSFDKAVDTLRRAKASGLAV
SVNTQIGAATLPDLPELMDTIIELGATHWQIQITVAMGNAVDHPELLLQPYKLLEVMPLLARLYREGLDRGLLMNVGNNI
GYYGPYEHLWRGFGDERVHWSGCAAGQTVLALEADGTVKGCPSLATVGFSGGNVRNMSLHDIWHYSEGMHFGRLRSVDDL
WGYCRSCYYNDVCRGGCTWTSHSLLGKPGNNPYCHYRTLELQKQGLRERIVKVEDAAQRSFAVGRFDLITERIDTGEKVS
SVSDSGQVIKLAWINQGQSSPEEGRLPTQLALCRDCLQYIHPHESICPHCRADVAAAEARHLNDRARQQAIMKTLTGLLA
GVPSSLS
>Mature_486_residues
TDNRPARYLSDTDLKRYVPVHVVWEITLACDLKCLHCGSRAGHRRPNELNTRECLEVIDSLAALGTREITLIGGEAYLRK
DWTQLIRAIHDHGMYCAIQTGGRNLTPAKMQAAVDAGLNGVGISLDGLAPLHDKVRNVSGSFDKAVDTLRRAKASGLAVS
VNTQIGAATLPDLPELMDTIIELGATHWQIQITVAMGNAVDHPELLLQPYKLLEVMPLLARLYREGLDRGLLMNVGNNIG
YYGPYEHLWRGFGDERVHWSGCAAGQTVLALEADGTVKGCPSLATVGFSGGNVRNMSLHDIWHYSEGMHFGRLRSVDDLW
GYCRSCYYNDVCRGGCTWTSHSLLGKPGNNPYCHYRTLELQKQGLRERIVKVEDAAQRSFAVGRFDLITERIDTGEKVSS
VSDSGQVIKLAWINQGQSSPEEGRLPTQLALCRDCLQYIHPHESICPHCRADVAAAEARHLNDRARQQAIMKTLTGLLAG
VPSSLS

Specific function: Together With Moac, Is Involved In The Conversion Of A Guanosine Derivative (Gxp) Into Molybdopterin Precursor Z. [C]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 53675; Mature: 53544

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNRPARYLSDTDLKRYVPVHVVWEITLACDLKCLHCGSRAGHRRPNELNTRECLEVID
CCCCCCCCCCCCCCHHHCCCEEEEEEEEEHHCCCCEECCCCCCCCCCCCCCHHHHHHHHH
SLAALGTREITLIGGEAYLRKDWTQLIRAIHDHGMYCAIQTGGRNLTPAKMQAAVDAGLN
HHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCC
GVGISLDGLAPLHDKVRNVSGSFDKAVDTLRRAKASGLAVSVNTQIGAATLPDLPELMDT
CCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHH
IIELGATHWQIQITVAMGNAVDHPELLLQPYKLLEVMPLLARLYREGLDRGLLMNVGNNI
HHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
GYYGPYEHLWRGFGDERVHWSGCAAGQTVLALEADGTVKGCPSLATVGFSGGNVRNMSLH
CCCCCHHHHHCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCEECCHHH
DIWHYSEGMHFGRLRSVDDLWGYCRSCYYNDVCRGGCTWTSHSLLGKPGNNPYCHYRTLE
HHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHH
LQKQGLRERIVKVEDAAQRSFAVGRFDLITERIDTGEKVSSVSDSGQVIKLAWINQGQSS
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEECCCCCC
PEEGRLPTQLALCRDCLQYIHPHESICPHCRADVAAAEARHLNDRARQQAIMKTLTGLLA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVPSSLS
CCCCCCC
>Mature Secondary Structure 
TDNRPARYLSDTDLKRYVPVHVVWEITLACDLKCLHCGSRAGHRRPNELNTRECLEVID
CCCCCCCCCCCCCHHHCCCEEEEEEEEEHHCCCCEECCCCCCCCCCCCCCHHHHHHHHH
SLAALGTREITLIGGEAYLRKDWTQLIRAIHDHGMYCAIQTGGRNLTPAKMQAAVDAGLN
HHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCC
GVGISLDGLAPLHDKVRNVSGSFDKAVDTLRRAKASGLAVSVNTQIGAATLPDLPELMDT
CCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHH
IIELGATHWQIQITVAMGNAVDHPELLLQPYKLLEVMPLLARLYREGLDRGLLMNVGNNI
HHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
GYYGPYEHLWRGFGDERVHWSGCAAGQTVLALEADGTVKGCPSLATVGFSGGNVRNMSLH
CCCCCHHHHHCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCEECCHHH
DIWHYSEGMHFGRLRSVDDLWGYCRSCYYNDVCRGGCTWTSHSLLGKPGNNPYCHYRTLE
HHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHH
LQKQGLRERIVKVEDAAQRSFAVGRFDLITERIDTGEKVSSVSDSGQVIKLAWINQGQSS
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEECCCCCC
PEEGRLPTQLALCRDCLQYIHPHESICPHCRADVAAAEARHLNDRARQQAIMKTLTGLLA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVPSSLS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA