| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is steT [H]
Identifier: 77458570
GI number: 77458570
Start: 2704014
End: 2705378
Strand: Direct
Name: steT [H]
Synonym: Pfl01_2343
Alternate gene names: 77458570
Gene position: 2704014-2705378 (Clockwise)
Preceding gene: 77458569
Following gene: 77458576
Centisome position: 42.0
GC content: 61.68
Gene sequence:
>1365_bases ATGACTCAAACCAATGGCCCCAAGCGGCACCTGCCGGTGTTCCAGGCATTGCTGATCACGCTGGGCATGGTCATCACCAC CGATATTCTCAAAACCGCGCCGACCGTTGCCTTGAACGTCGGGCCGGAACATTTCTATTGGGTCTGGGTGCTTGGCGGAC TGGCGTCGATGGCCGGGGCCTTGTGCTTTGCCGAGATGGCCACCGCGTTCCCGCATCCGGGCGGTGACTATCATTTCCTG CGCACCGCTTATGGCGAGCGCATGGGTTTCCTGTTTGCCTGGTCGCGATTCTCGGTGATGCACACCGGGTGGATCGCGTT GTCGGCGTTCATGTTTGCCGACTACTTCAATGCGGTCGTGCCGTTGGGGCATTACGGATCGGGGCTGTTTGCCGGTGCGA TCATCGCTGCGCTGGTACTGCTGAATCTGACGGGCAAGCACATTGGTTTCATGACTCAGACGGTGCTGGTCGGGCTGCTT GCTCTCGGGTTCCTGAGCATTGCCAGCGCCGGGGTCTGGCTGGCGTGGCAAGGGTTCGAACCAACGCTGCCCAGCGATCC GGTGGTGCCCGAACACACGGGCGCGGCGGGATTTTCAGCGGCGATGATCTTCGTATTTCTGGCCTTCGGCGGCTGGAGCG ATGCAGCGACATTGTCCGCCGAAGTGCGCGATGGTCGACGCGGGATCTTCATCGCCATGCTCGGTGCGCTGACGGTGCTG ATGGCGATCTATCTGGCGCTGAACTGGGCGTTCGTCCAAGGGCTGGGATTCGAAGGCCTGGCGGCGAGCAACGCGCCGGC GGTGGAATTGTTGAACCGCGCCTTCGGTGCCCCGGGCGTGCTGCTGATCCTGCTGATGGTTGGCATCGCGGCCATCGCCA CTATCAACTCAACCTTGCTGGTCGGCGCCCGCACCACCTACGCCGCCGCCCGCGATGTGGCGCAACTGCGCCGCTTCGGT GAGTGGGATGAGCGCGATGGCGTCCCGCGCAAGGCGTTGTTGGCGGAGGGGGCGGTGGCGTTGTTGCTGGTGTTGTTTGG CAGTTTTACCCAGAGCGGTTTCAACACCATGGTTGAGTATCTGACGCCGGTGTACTGGCTGTTTCTGAGTTTGAGCAGTC TCGCGTTGATCATTCTGCGCAGGCGCTTTCCTGAGGTGCCCCGGCCGGTGAGGGTGCCGCTTTATCCGGTTTTGCCGCTG GTGTTTTTTGGGTTGTGCGTTTACATGCTGTATTCCAGCGTGACGGTGGTTGGTTTCGGCGCTTTTCTGGGGATTGGGGT ATTGCTGGTGGGGGCGTTCTTGCTGGCCGGGTTGAGCTGCCTGGTGTCGACACCTCGGCAGGCTCTGCAACGGAGCGTAG ATTAG
Upstream 100 bases:
>100_bases GTCGCCGATCGGCACCAACGGCGCGTATTACTACGCCACCGCGACTTACGGCTTCTGAGTCTTTTCCGCCATGGATGGCG GATCATCAGCGGGAACCTTC
Downstream 100 bases:
>100_bases AAGGACACCACCGCCGGTTGCGACAACCGCAGCACCGACAAATCCCCCGTAATCCGCTTGTACGCCAAACGAATCGCCTC GATGTCACTCTCACGCTTCG
Product: amino acid permease-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MTQTNGPKRHLPVFQALLITLGMVITTDILKTAPTVALNVGPEHFYWVWVLGGLASMAGALCFAEMATAFPHPGGDYHFL RTAYGERMGFLFAWSRFSVMHTGWIALSAFMFADYFNAVVPLGHYGSGLFAGAIIAALVLLNLTGKHIGFMTQTVLVGLL ALGFLSIASAGVWLAWQGFEPTLPSDPVVPEHTGAAGFSAAMIFVFLAFGGWSDAATLSAEVRDGRRGIFIAMLGALTVL MAIYLALNWAFVQGLGFEGLAASNAPAVELLNRAFGAPGVLLILLMVGIAAIATINSTLLVGARTTYAAARDVAQLRRFG EWDERDGVPRKALLAEGAVALLLVLFGSFTQSGFNTMVEYLTPVYWLFLSLSSLALIILRRRFPEVPRPVRVPLYPVLPL VFFGLCVYMLYSSVTVVGFGAFLGIGVLLVGAFLLAGLSCLVSTPRQALQRSVD
Sequences:
>Translated_454_residues MTQTNGPKRHLPVFQALLITLGMVITTDILKTAPTVALNVGPEHFYWVWVLGGLASMAGALCFAEMATAFPHPGGDYHFL RTAYGERMGFLFAWSRFSVMHTGWIALSAFMFADYFNAVVPLGHYGSGLFAGAIIAALVLLNLTGKHIGFMTQTVLVGLL ALGFLSIASAGVWLAWQGFEPTLPSDPVVPEHTGAAGFSAAMIFVFLAFGGWSDAATLSAEVRDGRRGIFIAMLGALTVL MAIYLALNWAFVQGLGFEGLAASNAPAVELLNRAFGAPGVLLILLMVGIAAIATINSTLLVGARTTYAAARDVAQLRRFG EWDERDGVPRKALLAEGAVALLLVLFGSFTQSGFNTMVEYLTPVYWLFLSLSSLALIILRRRFPEVPRPVRVPLYPVLPL VFFGLCVYMLYSSVTVVGFGAFLGIGVLLVGAFLLAGLSCLVSTPRQALQRSVD >Mature_453_residues TQTNGPKRHLPVFQALLITLGMVITTDILKTAPTVALNVGPEHFYWVWVLGGLASMAGALCFAEMATAFPHPGGDYHFLR TAYGERMGFLFAWSRFSVMHTGWIALSAFMFADYFNAVVPLGHYGSGLFAGAIIAALVLLNLTGKHIGFMTQTVLVGLLA LGFLSIASAGVWLAWQGFEPTLPSDPVVPEHTGAAGFSAAMIFVFLAFGGWSDAATLSAEVRDGRRGIFIAMLGALTVLM AIYLALNWAFVQGLGFEGLAASNAPAVELLNRAFGAPGVLLILLMVGIAAIATINSTLLVGARTTYAAARDVAQLRRFGE WDERDGVPRKALLAEGAVALLLVLFGSFTQSGFNTMVEYLTPVYWLFLSLSSLALIILRRRFPEVPRPVRVPLYPVLPLV FFGLCVYMLYSSVTVVGFGAFLGIGVLLVGAFLLAGLSCLVSTPRQALQRSVD
Specific function: Exhibits an obligate exchange activity for serine, threonine and aromatic amino acids [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. L-type amino acid transporter (LAT) (TC 2.A.3.8) family [H]
Homologues:
Organism=Homo sapiens, GI187423910, Length=419, Percent_Identity=24.3436754176611, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI7657591, Length=419, Percent_Identity=24.3436754176611, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI186910308, Length=402, Percent_Identity=23.6318407960199, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI186910306, Length=402, Percent_Identity=23.6318407960199, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI186910304, Length=402, Percent_Identity=23.6318407960199, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI115648063, Length=397, Percent_Identity=23.4256926952141, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI115648022, Length=397, Percent_Identity=23.4256926952141, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI33286428, Length=450, Percent_Identity=24.6666666666667, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI9790235, Length=409, Percent_Identity=26.6503667481663, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI71979932, Length=416, Percent_Identity=23.0769230769231, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI7657683, Length=388, Percent_Identity=22.1649484536082, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI33286430, Length=238, Percent_Identity=24.7899159663866, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI87082250, Length=384, Percent_Identity=20.8333333333333, Blast_Score=74, Evalue=3e-14, Organism=Caenorhabditis elegans, GI32566699, Length=360, Percent_Identity=25, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71993915, Length=404, Percent_Identity=26.2376237623762, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71982608, Length=400, Percent_Identity=24.75, Blast_Score=98, Evalue=7e-21, Organism=Caenorhabditis elegans, GI71982612, Length=400, Percent_Identity=24.75, Blast_Score=98, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17540018, Length=434, Percent_Identity=22.8110599078341, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71995388, Length=403, Percent_Identity=26.7990074441687, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71995382, Length=403, Percent_Identity=26.7990074441687, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI193208714, Length=403, Percent_Identity=23.5732009925558, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI32566695, Length=403, Percent_Identity=23.5732009925558, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17568033, Length=409, Percent_Identity=22.9828850855746, Blast_Score=85, Evalue=8e-17, Organism=Drosophila melanogaster, GI21357367, Length=432, Percent_Identity=25.2314814814815, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI45550968, Length=445, Percent_Identity=25.6179775280899, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI19921172, Length=445, Percent_Identity=25.6179775280899, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24651635, Length=395, Percent_Identity=26.5822784810127, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI24651633, Length=395, Percent_Identity=26.5822784810127, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI221331183, Length=393, Percent_Identity=24.4274809160305, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI17647653, Length=393, Percent_Identity=24.4274809160305, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24664379, Length=393, Percent_Identity=24.4274809160305, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24641993, Length=389, Percent_Identity=22.879177377892, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI24641995, Length=389, Percent_Identity=22.879177377892, Blast_Score=99, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 48653; Mature: 48522
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTNGPKRHLPVFQALLITLGMVITTDILKTAPTVALNVGPEHFYWVWVLGGLASMAGA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHH LCFAEMATAFPHPGGDYHFLRTAYGERMGFLFAWSRFSVMHTGWIALSAFMFADYFNAVV HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLGHYGSGLFAGAIIAALVLLNLTGKHIGFMTQTVLVGLLALGFLSIASAGVWLAWQGFE CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC PTLPSDPVVPEHTGAAGFSAAMIFVFLAFGGWSDAATLSAEVRDGRRGIFIAMLGALTVL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH MAIYLALNWAFVQGLGFEGLAASNAPAVELLNRAFGAPGVLLILLMVGIAAIATINSTLL HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHE VGARTTYAAARDVAQLRRFGEWDERDGVPRKALLAEGAVALLLVLFGSFTQSGFNTMVEY EECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTPVYWLFLSLSSLALIILRRRFPEVPRPVRVPLYPVLPLVFFGLCVYMLYSSVTVVGFG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AFLGIGVLLVGAFLLAGLSCLVSTPRQALQRSVD HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCC >Mature Secondary Structure TQTNGPKRHLPVFQALLITLGMVITTDILKTAPTVALNVGPEHFYWVWVLGGLASMAGA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHH LCFAEMATAFPHPGGDYHFLRTAYGERMGFLFAWSRFSVMHTGWIALSAFMFADYFNAVV HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLGHYGSGLFAGAIIAALVLLNLTGKHIGFMTQTVLVGLLALGFLSIASAGVWLAWQGFE CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC PTLPSDPVVPEHTGAAGFSAAMIFVFLAFGGWSDAATLSAEVRDGRRGIFIAMLGALTVL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH MAIYLALNWAFVQGLGFEGLAASNAPAVELLNRAFGAPGVLLILLMVGIAAIATINSTLL HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHE VGARTTYAAARDVAQLRRFGEWDERDGVPRKALLAEGAVALLLVLFGSFTQSGFNTMVEY EECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTPVYWLFLSLSSLALIILRRRFPEVPRPVRVPLYPVLPLVFFGLCVYMLYSSVTVVGFG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AFLGIGVLLVGAFLLAGLSCLVSTPRQALQRSVD HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]