| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458558
Identifier: 77458558
GI number: 77458558
Start: 2691933
End: 2692373
Strand: Direct
Name: 77458558
Synonym: Pfl01_2331
Alternate gene names: NA
Gene position: 2691933-2692373 (Clockwise)
Preceding gene: 77458557
Following gene: 77458559
Centisome position: 41.81
GC content: 51.02
Gene sequence:
>441_bases ATGAATGATCAAGCGTTCAAAATGTGGCGAGATAAACTGGTTTCATTGGATCGCTACGAGAACCCGGAAGATGCTCGTGA GTTCTCGGCGCTCGTGAGCAGTGTCCGCGACGAACTCGATGCAAAAACCATTGATGTACTACTGTCGACCTTTTGCGATG AAGACGACTACGGTGTGCAAGAGCGCGTGGTGGGTGTTCTTGATCATGCTGAAGCGGGCGTTTTTGCTGAAAGGCTTGCG GTGAACTTCTCAACGTTGCAAAGACAGGCAAGTGGCAAGGAATGGCCTCTTATTCTGATCGGTCGTGTCGTGAACTCGGA CAACGCAGAGAAGATCAAGGCGATTGTCGCGGCTGCGAAGAAGTCCCCGGATCTTGACGCCTTTATTCGAAGTGATGAGT TCCTGGATGAGTATCCCGAGATCGATAGCTACTTCCCCTGA
Upstream 100 bases:
>100_bases TAGCCACTCAGGTCGGACAACCCAGAAAGTACAATGAAGCAATGCAAGAAATGCTGGCGTATGCCAAGTGCCGTAAATTT CTGGATAAGTGAGAGAAACC
Downstream 100 bases:
>100_bases TACGACTCAAGGCCCGCCGTTTTCACGTTTGATGGATTCCACGGCGCCATTTGGCATGCCAGAAGTCAGGTCAAAGGAGA GACAACATGAAAGACGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MNDQAFKMWRDKLVSLDRYENPEDAREFSALVSSVRDELDAKTIDVLLSTFCDEDDYGVQERVVGVLDHAEAGVFAERLA VNFSTLQRQASGKEWPLILIGRVVNSDNAEKIKAIVAAAKKSPDLDAFIRSDEFLDEYPEIDSYFP
Sequences:
>Translated_146_residues MNDQAFKMWRDKLVSLDRYENPEDAREFSALVSSVRDELDAKTIDVLLSTFCDEDDYGVQERVVGVLDHAEAGVFAERLA VNFSTLQRQASGKEWPLILIGRVVNSDNAEKIKAIVAAAKKSPDLDAFIRSDEFLDEYPEIDSYFP >Mature_146_residues MNDQAFKMWRDKLVSLDRYENPEDAREFSALVSSVRDELDAKTIDVLLSTFCDEDDYGVQERVVGVLDHAEAGVFAERLA VNFSTLQRQASGKEWPLILIGRVVNSDNAEKIKAIVAAAKKSPDLDAFIRSDEFLDEYPEIDSYFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16523; Mature: 16523
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDQAFKMWRDKLVSLDRYENPEDAREFSALVSSVRDELDAKTIDVLLSTFCDEDDYGVQ CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH ERVVGVLDHAEAGVFAERLAVNFSTLQRQASGKEWPLILIGRVVNSDNAEKIKAIVAAAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCHHHHHHHHHHHH KSPDLDAFIRSDEFLDEYPEIDSYFP CCCCHHHHHHCHHHHHHCCCCCCCCC >Mature Secondary Structure MNDQAFKMWRDKLVSLDRYENPEDAREFSALVSSVRDELDAKTIDVLLSTFCDEDDYGVQ CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH ERVVGVLDHAEAGVFAERLAVNFSTLQRQASGKEWPLILIGRVVNSDNAEKIKAIVAAAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCHHHHHHHHHHHH KSPDLDAFIRSDEFLDEYPEIDSYFP CCCCHHHHHHCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA