| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458501
Identifier: 77458501
GI number: 77458501
Start: 2625271
End: 2625684
Strand: Reverse
Name: 77458501
Synonym: Pfl01_2274
Alternate gene names: NA
Gene position: 2625684-2625271 (Counterclockwise)
Preceding gene: 77458502
Following gene: 77458500
Centisome position: 40.78
GC content: 62.56
Gene sequence:
>414_bases ATGTTCAGCCGAATCCTGCTGGCCGCCACGTTTGCGACCGTTTCGATTTCATCCGCCTCGGCCGTCGAGCCGCAGGCAGG CAAGGTCACCGTGGTGTTCGACCGCGCCCTGCCGAACGTTCCGGGTAAATCCATGAAGGGCGTGCTGGTGGAATACGCAC CCGGTGGTTCTTCGCCGGCACACTTTCATCCGAAGTCCGCGTTCATCTACGCCACGGTGCTTGAGGGCGCCGTGCGCAGC AAGGTCGGCGACGGGCCGGAGAAGGTCTACAAGGCCGGGGAAAACTTCGTCGAGCAACCGGGTGATTTCCACGCGGTGAG CGCCAATGCCAGCAGCACCGAACCGTCCCGTCTGCTGGCGGTATTCGTGCTCGATAGCAACGAGACCGTCCTGGTCAAAC CGGTCAAGCCGTAA
Upstream 100 bases:
>100_bases CGGCAGCAGCAACCCGCGCCTGGGTCCAACGCGCTTTGAAGACTGGCTGGCGAAATCGACCCAGCGCTGAAACACCCCAC CCATTTGAAGGAGTATCGCC
Downstream 100 bases:
>100_bases CCGATCCATACGCCAATCCGCCTCCGGCAGCGTGGCTGCCGGAGAGTACCGCTACGGGGCGCGTTCAAGGTCGGCGTTGC AAAACATGCCCGATCAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Region; Cupin Domain Protein; Cupin 2 Barrel; Cupin Domain-Containing Protein; Cupin Domain-Containing
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MFSRILLAATFATVSISSASAVEPQAGKVTVVFDRALPNVPGKSMKGVLVEYAPGGSSPAHFHPKSAFIYATVLEGAVRS KVGDGPEKVYKAGENFVEQPGDFHAVSANASSTEPSRLLAVFVLDSNETVLVKPVKP
Sequences:
>Translated_137_residues MFSRILLAATFATVSISSASAVEPQAGKVTVVFDRALPNVPGKSMKGVLVEYAPGGSSPAHFHPKSAFIYATVLEGAVRS KVGDGPEKVYKAGENFVEQPGDFHAVSANASSTEPSRLLAVFVLDSNETVLVKPVKP >Mature_137_residues MFSRILLAATFATVSISSASAVEPQAGKVTVVFDRALPNVPGKSMKGVLVEYAPGGSSPAHFHPKSAFIYATVLEGAVRS KVGDGPEKVYKAGENFVEQPGDFHAVSANASSTEPSRLLAVFVLDSNETVLVKPVKP
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14344; Mature: 14344
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSRILLAATFATVSISSASAVEPQAGKVTVVFDRALPNVPGKSMKGVLVEYAPGGSSPA CCCHHEEEEHEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCC HFHPKSAFIYATVLEGAVRSKVGDGPEKVYKAGENFVEQPGDFHAVSANASSTEPSRLLA CCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHCCHHHHCCCCEEEEECCCCCCCCCEEEE VFVLDSNETVLVKPVKP EEEECCCCEEEEEECCC >Mature Secondary Structure MFSRILLAATFATVSISSASAVEPQAGKVTVVFDRALPNVPGKSMKGVLVEYAPGGSSPA CCCHHEEEEHEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCC HFHPKSAFIYATVLEGAVRSKVGDGPEKVYKAGENFVEQPGDFHAVSANASSTEPSRLLA CCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHCCHHHHCCCCEEEEECCCCCCCCCEEEE VFVLDSNETVLVKPVKP EEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA