| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458454
Identifier: 77458454
GI number: 77458454
Start: 2555407
End: 2556951
Strand: Direct
Name: 77458454
Synonym: Pfl01_2227
Alternate gene names: NA
Gene position: 2555407-2556951 (Clockwise)
Preceding gene: 77458453
Following gene: 77458458
Centisome position: 39.69
GC content: 60.65
Gene sequence:
>1545_bases ATGAGCAATGCCTGGAACGAGGGATATTTCACGGACGAAGGTTACACCTACGGGTACAGCCGGGAAATCAATCCGGTTTT CCAGCGTTATTGTCTGCTGTTGCGCGGTTTCGCCACGCTGGAGAGTACCGACGGTTACCACTGTGAACTGGGTTTCGGTC AGGGCGTCTCGATCAATATCCATGCCGCGGGCAATCCGGGCACCTATGTCGGTACCGACTTTCACCCGGGTCAGGCGTCC CATGCCATCGCTCTCGCACGCGACTGGGGCAGCGATGCGCGACTGTATGACGACAGCTTCGAGCAGTTGCTGGCCCGTCA TGACTTGCCCCAGTTCGACAGCATCAGCCTGCATGGCATCTGGACCTGGGTCAGCCGCGATAACCACAAGCTGATCGTGG AATTCGTCCGTCGCCATCTCAAACCAGGTGGTCTGCTCTACGTCAGCTACAACTGCTTCCCGGGCTGGTCGCCTCAGGCA CCCTTGCGCCAACTGTTCAGCCTGCACGACCGGTTCGCCAGCCAGGCCGGTGCGCGCCCGGATCAGCGTATCGATGCAGC GCTGCAGTTTTCCGAAGCGCTATTGGCGGCCAACCCCAAATATGCCAACTCCGCACCGGGTCTGGACGCCAAGCTCCAGA GCATCAAGGGCCAGGACCGCCAGTACGTCGCCCATGAGTATTTCAACCGCGACTGGAACTGCATGTATTTCACCGACGTG GTTGATGCCCTGGCACCCGCCAAGCTCGATTACGCCACGACAGCCGTGCCGCTGGACTCCGTCGACCCGCTCAACCTGAG CGCCGAAGGCATGGACTTTCTGGAAGGTATCGAGCATCCCGTCATGCGCGAGCAGGCGCGTGACTACTTCGTGAACCAGA GTTTTCGTCGGGACCTCTATGTACGCGGCGCCAACAGACTGTCTGCCACCGAGCACCGCGAGCGCATGCTCGGCACGCGC TTCGTCCTGTTACAGGCGGCCGAGAGCGTGCCAGCCAACGTCACTGGTCCGGCAGGCGCAGCGACATTGCAGACAGAGAT CTATGGCCCGGTACTCGCAGCCCTGGCGGATGACGCCTATGTGCCGAAGACCTTGCGGCATTTGCTGGATCTTGTGCCCT CGTTGGCCTATGGCGACGTCGAGCAGGCCCTCAACGTGCTGATCGGCATGAGCGTCGTGGCGCCCTGTCAGAGCGAGGCG GCCGAAAAGCTGGTGCAGGCCCGCTGCAATACCCTAAACCTGCAGCTGTGCAAGCGTTCGTTGTATGGCAACAAGATTCA GACCCTGGCGAGTCCGGTGACCGGTGGTGGCGTGACGGTCAGCCGCTTCCAGCAGTTGTTCCTGATATCGATCAAGCAAG GCAAAAAACACCCGGATGAATGGGCGCAACTGGCGTGGGGCATCATCGGCGGCCAGGGCGAAGGTCTCCTCAAGGACGGC AGGGCCCTGACCACCGCGGAAGAAAACCTTGCCGAACTGACCGTGCAGGCCCAAGCGTTTGCCGAGAGTACGCTGGTGAT TCTCAAGGCTTTGAAAATCGTCTAG
Upstream 100 bases:
>100_bases ATGGAGGAGGCGTTTGCCTGACGTTTTTCCTCTTGTGATACGTCACGACTACCCCGTATAAGAGCGACTTTCACTTCCGA TATAAGAAAAGGGTGCACGC
Downstream 100 bases:
>100_bases TCGAGACGAGGGACGGCAGGACGTTCTCGCGTCGCCTGTCGTCGTCCGGGGTATTTCGGATTCTTGCGCAAAACCAGAAT GACAGCACCGCGGCTGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MSNAWNEGYFTDEGYTYGYSREINPVFQRYCLLLRGFATLESTDGYHCELGFGQGVSINIHAAGNPGTYVGTDFHPGQAS HAIALARDWGSDARLYDDSFEQLLARHDLPQFDSISLHGIWTWVSRDNHKLIVEFVRRHLKPGGLLYVSYNCFPGWSPQA PLRQLFSLHDRFASQAGARPDQRIDAALQFSEALLAANPKYANSAPGLDAKLQSIKGQDRQYVAHEYFNRDWNCMYFTDV VDALAPAKLDYATTAVPLDSVDPLNLSAEGMDFLEGIEHPVMREQARDYFVNQSFRRDLYVRGANRLSATEHRERMLGTR FVLLQAAESVPANVTGPAGAATLQTEIYGPVLAALADDAYVPKTLRHLLDLVPSLAYGDVEQALNVLIGMSVVAPCQSEA AEKLVQARCNTLNLQLCKRSLYGNKIQTLASPVTGGGVTVSRFQQLFLISIKQGKKHPDEWAQLAWGIIGGQGEGLLKDG RALTTAEENLAELTVQAQAFAESTLVILKALKIV
Sequences:
>Translated_514_residues MSNAWNEGYFTDEGYTYGYSREINPVFQRYCLLLRGFATLESTDGYHCELGFGQGVSINIHAAGNPGTYVGTDFHPGQAS HAIALARDWGSDARLYDDSFEQLLARHDLPQFDSISLHGIWTWVSRDNHKLIVEFVRRHLKPGGLLYVSYNCFPGWSPQA PLRQLFSLHDRFASQAGARPDQRIDAALQFSEALLAANPKYANSAPGLDAKLQSIKGQDRQYVAHEYFNRDWNCMYFTDV VDALAPAKLDYATTAVPLDSVDPLNLSAEGMDFLEGIEHPVMREQARDYFVNQSFRRDLYVRGANRLSATEHRERMLGTR FVLLQAAESVPANVTGPAGAATLQTEIYGPVLAALADDAYVPKTLRHLLDLVPSLAYGDVEQALNVLIGMSVVAPCQSEA AEKLVQARCNTLNLQLCKRSLYGNKIQTLASPVTGGGVTVSRFQQLFLISIKQGKKHPDEWAQLAWGIIGGQGEGLLKDG RALTTAEENLAELTVQAQAFAESTLVILKALKIV >Mature_513_residues SNAWNEGYFTDEGYTYGYSREINPVFQRYCLLLRGFATLESTDGYHCELGFGQGVSINIHAAGNPGTYVGTDFHPGQASH AIALARDWGSDARLYDDSFEQLLARHDLPQFDSISLHGIWTWVSRDNHKLIVEFVRRHLKPGGLLYVSYNCFPGWSPQAP LRQLFSLHDRFASQAGARPDQRIDAALQFSEALLAANPKYANSAPGLDAKLQSIKGQDRQYVAHEYFNRDWNCMYFTDVV DALAPAKLDYATTAVPLDSVDPLNLSAEGMDFLEGIEHPVMREQARDYFVNQSFRRDLYVRGANRLSATEHRERMLGTRF VLLQAAESVPANVTGPAGAATLQTEIYGPVLAALADDAYVPKTLRHLLDLVPSLAYGDVEQALNVLIGMSVVAPCQSEAA EKLVQARCNTLNLQLCKRSLYGNKIQTLASPVTGGGVTVSRFQQLFLISIKQGKKHPDEWAQLAWGIIGGQGEGLLKDGR ALTTAEENLAELTVQAQAFAESTLVILKALKIV
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To R.prowazekii RP789, RP027 and RP028 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013217 - InterPro: IPR018773 [H]
Pfam domain/function: PF08242 Methyltransf_12; PF10119 MethyTransf_Reg [H]
EC number: NA
Molecular weight: Translated: 56745; Mature: 56613
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00036 BZIP_BASIC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAWNEGYFTDEGYTYGYSREINPVFQRYCLLLRGFATLESTDGYHCELGFGQGVSINI CCCCCCCCEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEE HAAGNPGTYVGTDFHPGQASHAIALARDWGSDARLYDDSFEQLLARHDLPQFDSISLHGI EECCCCCCEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEE WTWVSRDNHKLIVEFVRRHLKPGGLLYVSYNCFPGWSPQAPLRQLFSLHDRFASQAGARP EEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC DQRIDAALQFSEALLAANPKYANSAPGLDAKLQSIKGQDRQYVAHEYFNRDWNCMYFTDV HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCEEEHHHH VDALAPAKLDYATTAVPLDSVDPLNLSAEGMDFLEGIEHPVMREQARDYFVNQSFRRDLY HHHHCCCCCCCHHEECCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCHHHHHHHE VRGANRLSATEHRERMLGTRFVLLQAAESVPANVTGPAGAATLQTEIYGPVLAALADDAY EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC VPKTLRHLLDLVPSLAYGDVEQALNVLIGMSVVAPCQSEAAEKLVQARCNTLNLQLCKRS CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHH LYGNKIQTLASPVTGGGVTVSRFQQLFLISIKQGKKHPDEWAQLAWGIIGGQGEGLLKDG HCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC RALTTAEENLAELTVQAQAFAESTLVILKALKIV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNAWNEGYFTDEGYTYGYSREINPVFQRYCLLLRGFATLESTDGYHCELGFGQGVSINI CCCCCCCEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEE HAAGNPGTYVGTDFHPGQASHAIALARDWGSDARLYDDSFEQLLARHDLPQFDSISLHGI EECCCCCCEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEE WTWVSRDNHKLIVEFVRRHLKPGGLLYVSYNCFPGWSPQAPLRQLFSLHDRFASQAGARP EEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC DQRIDAALQFSEALLAANPKYANSAPGLDAKLQSIKGQDRQYVAHEYFNRDWNCMYFTDV HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCEEEHHHH VDALAPAKLDYATTAVPLDSVDPLNLSAEGMDFLEGIEHPVMREQARDYFVNQSFRRDLY HHHHCCCCCCCHHEECCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCHHHHHHHE VRGANRLSATEHRERMLGTRFVLLQAAESVPANVTGPAGAATLQTEIYGPVLAALADDAY EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC VPKTLRHLLDLVPSLAYGDVEQALNVLIGMSVVAPCQSEAAEKLVQARCNTLNLQLCKRS CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHH LYGNKIQTLASPVTGGGVTVSRFQQLFLISIKQGKKHPDEWAQLAWGIIGGQGEGLLKDG HCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC RALTTAEENLAELTVQAQAFAESTLVILKALKIV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]