| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ppnK [H]
Identifier: 77458422
GI number: 77458422
Start: 2478809
End: 2479699
Strand: Direct
Name: ppnK [H]
Synonym: Pfl01_2195
Alternate gene names: 77458422
Gene position: 2478809-2479699 (Clockwise)
Preceding gene: 77458420
Following gene: 77458423
Centisome position: 38.5
GC content: 60.72
Gene sequence:
>891_bases ATGGAGCAATTTCGTAATATCGGCATCATCGGTCGCCTGGGCAGCTCCCAGGTGCTGGATACCGTCCGCCGACTGAAACG CTTCCTGCTCGATCGTCACCTGCATGTGATTCTCGAAGACACCATCGCCGAAGTCCTGCCGGGCCATGGCCTGCAAACTT CTTCACGCAAGATGCTCGGCGAAGTTTGCGACATGGTCATCGTGGTCGGCGGTGACGGCAGCCTGCTCGGCGCAGCGCGG GCACTGGCCAAACACAATATTCCGGTGCTCGGGATCAACCGTGGCAGCCTCGGTTTTCTCACCGACATCCGCCCCGACGA GCTGGAAATCAAGGTCGCCGAAGTGCTCGACGGCCATTATCTGGTGGAAAACCGCTTCCTGCTGCAGGCCGAAGTCCGTC GTCACGCCGAGGCCATCGGCCAGGGCGATGCGCTGAACGACGTGGTGCTGCACCCCGGCAAATCGACGCGGATGATCGAG TTCGAGCTGTACATCGACGGCCAGTTCGTCTGCAGCCAGAAGGCCGACGGCCTGATCGTCGCCACCCCGACCGGTTCCAC CGCTTACGCACTGTCCGCCGGTGGCCCGATCATGCATCCCAAGCTTGACGCTATTGTGATTGTGCCGATGTACCCCCATA CCTTGTCGGGCAGACCGATCGTGGTCGATGGCAATAGTGAGCTGAAAATCGTCGTGTCCAAAGATATGCAGATCTACCCG CAGGTCTCCTGCGACGGGCAGAACCACTTCACCTGCGCGCCGGGCGACACCATCACCGTCAGCAAGAAAGCGCAGAAGCT GCGGCTGATTCATCCGCTCGACCACAACTACTACGAAGTCTGCCGGACCAAGCTCGGCTGGGGCAGCAAGTTGGGTGGTG GAGGCGACTGA
Upstream 100 bases:
>100_bases TCAAACACCGGTGCATCCTCGGGGCTGAAAGGATTTTGTCTATCCGGCGCTTTCGCCCATAATCGTGCTTTTCGCCGTCT CAGTCCCCCGCAGGAGTCCC
Downstream 100 bases:
>100_bases TGCTCGATCCCGCGCGCAGTTATGACCTGATTGGTGACGTGCACGGATGCGCCCTGACCCTGGAACACCTGCTGGACCGT CTCGGTTATCACAAGCAGGG
Product: inorganic polyphosphate/ATP-NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase [H]
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MEQFRNIGIIGRLGSSQVLDTVRRLKRFLLDRHLHVILEDTIAEVLPGHGLQTSSRKMLGEVCDMVIVVGGDGSLLGAAR ALAKHNIPVLGINRGSLGFLTDIRPDELEIKVAEVLDGHYLVENRFLLQAEVRRHAEAIGQGDALNDVVLHPGKSTRMIE FELYIDGQFVCSQKADGLIVATPTGSTAYALSAGGPIMHPKLDAIVIVPMYPHTLSGRPIVVDGNSELKIVVSKDMQIYP QVSCDGQNHFTCAPGDTITVSKKAQKLRLIHPLDHNYYEVCRTKLGWGSKLGGGGD
Sequences:
>Translated_296_residues MEQFRNIGIIGRLGSSQVLDTVRRLKRFLLDRHLHVILEDTIAEVLPGHGLQTSSRKMLGEVCDMVIVVGGDGSLLGAAR ALAKHNIPVLGINRGSLGFLTDIRPDELEIKVAEVLDGHYLVENRFLLQAEVRRHAEAIGQGDALNDVVLHPGKSTRMIE FELYIDGQFVCSQKADGLIVATPTGSTAYALSAGGPIMHPKLDAIVIVPMYPHTLSGRPIVVDGNSELKIVVSKDMQIYP QVSCDGQNHFTCAPGDTITVSKKAQKLRLIHPLDHNYYEVCRTKLGWGSKLGGGGD >Mature_296_residues MEQFRNIGIIGRLGSSQVLDTVRRLKRFLLDRHLHVILEDTIAEVLPGHGLQTSSRKMLGEVCDMVIVVGGDGSLLGAAR ALAKHNIPVLGINRGSLGFLTDIRPDELEIKVAEVLDGHYLVENRFLLQAEVRRHAEAIGQGDALNDVVLHPGKSTRMIE FELYIDGQFVCSQKADGLIVATPTGSTAYALSAGGPIMHPKLDAIVIVPMYPHTLSGRPIVVDGNSELKIVVSKDMQIYP QVSCDGQNHFTCAPGDTITVSKKAQKLRLIHPLDHNYYEVCRTKLGWGSKLGGGGD
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus [H]
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family [H]
Homologues:
Organism=Homo sapiens, GI55743112, Length=325, Percent_Identity=29.2307692307692, Blast_Score=115, Evalue=7e-26, Organism=Escherichia coli, GI1788968, Length=292, Percent_Identity=47.2602739726027, Blast_Score=273, Evalue=1e-74, Organism=Saccharomyces cerevisiae, GI6320794, Length=242, Percent_Identity=30.5785123966942, Blast_Score=129, Evalue=7e-31, Organism=Saccharomyces cerevisiae, GI6322509, Length=240, Percent_Identity=31.25, Blast_Score=128, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6325068, Length=219, Percent_Identity=31.9634703196347, Blast_Score=114, Evalue=2e-26, Organism=Drosophila melanogaster, GI28573830, Length=224, Percent_Identity=38.8392857142857, Blast_Score=125, Evalue=4e-29, Organism=Drosophila melanogaster, GI28573828, Length=255, Percent_Identity=35.6862745098039, Blast_Score=124, Evalue=5e-29, Organism=Drosophila melanogaster, GI28573826, Length=255, Percent_Identity=35.6862745098039, Blast_Score=124, Evalue=5e-29, Organism=Drosophila melanogaster, GI161077047, Length=224, Percent_Identity=38.8392857142857, Blast_Score=124, Evalue=6e-29, Organism=Drosophila melanogaster, GI28573832, Length=224, Percent_Identity=38.8392857142857, Blast_Score=124, Evalue=7e-29, Organism=Drosophila melanogaster, GI20129957, Length=278, Percent_Identity=31.6546762589928, Blast_Score=114, Evalue=5e-26, Organism=Drosophila melanogaster, GI24653422, Length=278, Percent_Identity=31.6546762589928, Blast_Score=114, Evalue=6e-26, Organism=Drosophila melanogaster, GI281363321, Length=280, Percent_Identity=31.4285714285714, Blast_Score=114, Evalue=7e-26, Organism=Drosophila melanogaster, GI24653424, Length=280, Percent_Identity=31.4285714285714, Blast_Score=114, Evalue=7e-26, Organism=Drosophila melanogaster, GI281363323, Length=280, Percent_Identity=31.4285714285714, Blast_Score=114, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 [H]
Pfam domain/function: PF01513 NAD_kinase [H]
EC number: =2.7.1.23 [H]
Molecular weight: Translated: 32213; Mature: 32213
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQFRNIGIIGRLGSSQVLDTVRRLKRFLLDRHLHVILEDTIAEVLPGHGLQTSSRKMLG CCCHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH EVCDMVIVVGGDGSLLGAARALAKHNIPVLGINRGSLGFLTDIRPDELEIKVAEVLDGHY HHCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCEEEEEEHHHCCEE LVENRFLLQAEVRRHAEAIGQGDALNDVVLHPGKSTRMIEFELYIDGQFVCSQKADGLIV EEECEEEEHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEEEEECCEEEECCCCCCEEE ATPTGSTAYALSAGGPIMHPKLDAIVIVPMYPHTLSGRPIVVDGNSELKIVVSKDMQIYP ECCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCEEEE QVSCDGQNHFTCAPGDTITVSKKAQKLRLIHPLDHNYYEVCRTKLGWGSKLGGGGD EEEECCCCCEEECCCCEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MEQFRNIGIIGRLGSSQVLDTVRRLKRFLLDRHLHVILEDTIAEVLPGHGLQTSSRKMLG CCCHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH EVCDMVIVVGGDGSLLGAARALAKHNIPVLGINRGSLGFLTDIRPDELEIKVAEVLDGHY HHCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCEEEEEEHHHCCEE LVENRFLLQAEVRRHAEAIGQGDALNDVVLHPGKSTRMIEFELYIDGQFVCSQKADGLIV EEECEEEEHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEEEEECCEEEECCCCCCEEE ATPTGSTAYALSAGGPIMHPKLDAIVIVPMYPHTLSGRPIVVDGNSELKIVVSKDMQIYP ECCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCEEEE QVSCDGQNHFTCAPGDTITVSKKAQKLRLIHPLDHNYYEVCRTKLGWGSKLGGGGD EEEECCCCCEEECCCCEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA