| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ada [H]
Identifier: 77458385
GI number: 77458385
Start: 2440640
End: 2441722
Strand: Reverse
Name: ada [H]
Synonym: Pfl01_2158
Alternate gene names: 77458385
Gene position: 2441722-2440640 (Counterclockwise)
Preceding gene: 77458387
Following gene: 77458384
Centisome position: 37.92
GC content: 62.88
Gene sequence:
>1083_bases ATGAACATACAGACCGCTGTCCTGCCCCCTCACGCCGAAATGGTTCGCGCCATGCTCGCAAGCGACACTGCCTATGAAGG CGTGTTTTTCACGGCCGTGAAAACCACCGGGATCTTTTGCCGCCCTACCTGCACGGCGCGCAAGCCGAAACCGGAAAACG TCGAGTTCTTCGCCCACGCTGACGATTGCCTGTCCGCTGGTTACCGCGCCTGTTTGCGCTGCAAACCGCTGGATGCCGCG GCCATCGCCCCGGATTGGGTGCAGCAGCTGCTAAAAGCGGTCGACGCCGATCCGGAACTTCGCTGGAGCGATGCGCAATT GCTCGCCGAAGGTATTGAACCGCTGAAGCTGCGGCGCTGGTTCAAGCAGCATTTCGGCATGACCTTCCATGCGTGGCTGC GCACCCGCCGACTCGGCGTGGCGCTGGGCGGGATCAAGCAAGGCACGTCCATCGACCATGCCGCGTTCGACTCCGGTTAT GAATCCCTCAGTGGTTTTCGCGATGCGTTTCAGAAGTCGTTCCACATCACGCCGGGGCGCGCAGCGGCCAGTGAACCGCT GCTGTTCACCCGCCTGACCACGCCATTGGGTCCTATGATTGCCATGGCCGAGCGGCGCGGGCTGGTCTTGCTGGAGTTTC TCGATCGCCCGGCGCTGACCCGCGAAGTCGAGGAATTGCAGAATCGCTACGGCTACGTGGTCGCACCGGGGCAGAACGCG CATTTGCAGCAGATCGACAACGAGCTGGCGCTGTACTTCGCCGGCAAGCTGAGCGAATTCAGTGTGCCACTGCACCTGCC CGGCAGCGAGTTTGCCCAGCAGGTCTGGGCCGAACTTCGGCAAATCCCTTACGGCCAAACCAGCACCTACGGCACCATCG CCGCACGCCTGGGCAAACCCGGCGCCAGCCGAGCAGTGGGGCTGGCCAACGGACACAATCGGCTGTCGATCGTGGTGCCA TGCCATCGGGTGATCGGTGCGGACGGCTCGTTGACCGGATATGGTGGTGGGCAACCGCGCAAGGCGTTTTTGCTCCGGCT GGAGAACGCCGCCGTGCAGCTCACGCAACAACTGGCTTTCTGA
Upstream 100 bases:
>100_bases TCCCGAGTTGTAGCGACCCGATCACTGTAGTGCAGCGGCCCGAAAATTCACTGTCGATTTTTCGGTGGAGCCATCGAATA ACTGGTTTTATCCTCGGCCC
Downstream 100 bases:
>100_bases CCAACGACAAGAAGGGATTTCGATGAACGCGCTCGACACTCAGTTTCACCAGTTGCACCACGATGACCTGCTGATCCTGA CCAACGTTGCCGACGCCACC
Product: transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase
Products: NA
Alternate protein names: Regulatory protein of adaptative response; O-6-methylguanine-DNA alkyltransferase [H]
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MNIQTAVLPPHAEMVRAMLASDTAYEGVFFTAVKTTGIFCRPTCTARKPKPENVEFFAHADDCLSAGYRACLRCKPLDAA AIAPDWVQQLLKAVDADPELRWSDAQLLAEGIEPLKLRRWFKQHFGMTFHAWLRTRRLGVALGGIKQGTSIDHAAFDSGY ESLSGFRDAFQKSFHITPGRAAASEPLLFTRLTTPLGPMIAMAERRGLVLLEFLDRPALTREVEELQNRYGYVVAPGQNA HLQQIDNELALYFAGKLSEFSVPLHLPGSEFAQQVWAELRQIPYGQTSTYGTIAARLGKPGASRAVGLANGHNRLSIVVP CHRVIGADGSLTGYGGGQPRKAFLLRLENAAVQLTQQLAF
Sequences:
>Translated_360_residues MNIQTAVLPPHAEMVRAMLASDTAYEGVFFTAVKTTGIFCRPTCTARKPKPENVEFFAHADDCLSAGYRACLRCKPLDAA AIAPDWVQQLLKAVDADPELRWSDAQLLAEGIEPLKLRRWFKQHFGMTFHAWLRTRRLGVALGGIKQGTSIDHAAFDSGY ESLSGFRDAFQKSFHITPGRAAASEPLLFTRLTTPLGPMIAMAERRGLVLLEFLDRPALTREVEELQNRYGYVVAPGQNA HLQQIDNELALYFAGKLSEFSVPLHLPGSEFAQQVWAELRQIPYGQTSTYGTIAARLGKPGASRAVGLANGHNRLSIVVP CHRVIGADGSLTGYGGGQPRKAFLLRLENAAVQLTQQLAF >Mature_360_residues MNIQTAVLPPHAEMVRAMLASDTAYEGVFFTAVKTTGIFCRPTCTARKPKPENVEFFAHADDCLSAGYRACLRCKPLDAA AIAPDWVQQLLKAVDADPELRWSDAQLLAEGIEPLKLRRWFKQHFGMTFHAWLRTRRLGVALGGIKQGTSIDHAAFDSGY ESLSGFRDAFQKSFHITPGRAAASEPLLFTRLTTPLGPMIAMAERRGLVLLEFLDRPALTREVEELQNRYGYVVAPGQNA HLQQIDNELALYFAGKLSEFSVPLHLPGSEFAQQVWAELRQIPYGQTSTYGTIAARLGKPGASRAVGLANGHNRLSIVVP CHRVIGADGSLTGYGGGQPRKAFLLRLENAAVQLTQQLAF
Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus. It activates the transcription of alkA, alkB and aidB [H]
COG id: COG0350
COG function: function code L; Methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI197304670, Length=167, Percent_Identity=32.3353293413174, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1788542, Length=345, Percent_Identity=33.9130434782609, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI1787596, Length=167, Percent_Identity=41.3173652694611, Blast_Score=119, Evalue=2e-28, Organism=Caenorhabditis elegans, GI115533068, Length=92, Percent_Identity=41.304347826087, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115533070, Length=92, Percent_Identity=41.304347826087, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320001, Length=83, Percent_Identity=46.9879518072289, Blast_Score=85, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004026 - InterPro: IPR016221 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 - InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF02805 Ada_Zn_binding; PF01035 DNA_binding_1; PF00165 HTH_AraC; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 39546; Mature: 39546
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: PS01124 HTH_ARAC_FAMILY_2 ; PS00374 MGMT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIQTAVLPPHAEMVRAMLASDTAYEGVFFTAVKTTGIFCRPTCTARKPKPENVEFFAHA CCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCEEEEEEC DDCLSAGYRACLRCKPLDAAAIAPDWVQQLLKAVDADPELRWSDAQLLAEGIEPLKLRRW HHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHH FKQHFGMTFHAWLRTRRLGVALGGIKQGTSIDHAAFDSGYESLSGFRDAFQKSFHITPGR HHHHCCCCHHHHHHHHHHHHEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCC AAASEPLLFTRLTTPLGPMIAMAERRGLVLLEFLDRPALTREVEELQNRYGYVVAPGQNA CCCCCCEEEEECCCCHHHHHHHHHCCCEEEEHHHCCCHHHHHHHHHHHHCCEEEECCCCC HLQQIDNELALYFAGKLSEFSVPLHLPGSEFAQQVWAELRQIPYGQTSTYGTIAARLGKP HHHHHCCCEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC GASRAVGLANGHNRLSIVVPCHRVIGADGSLTGYGGGQPRKAFLLRLENAAVQLTQQLAF CCCCEEEECCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCHHHHHEEHHHHHHHHHHHHCC >Mature Secondary Structure MNIQTAVLPPHAEMVRAMLASDTAYEGVFFTAVKTTGIFCRPTCTARKPKPENVEFFAHA CCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCEEEEEEC DDCLSAGYRACLRCKPLDAAAIAPDWVQQLLKAVDADPELRWSDAQLLAEGIEPLKLRRW HHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHH FKQHFGMTFHAWLRTRRLGVALGGIKQGTSIDHAAFDSGYESLSGFRDAFQKSFHITPGR HHHHCCCCHHHHHHHHHHHHEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCC AAASEPLLFTRLTTPLGPMIAMAERRGLVLLEFLDRPALTREVEELQNRYGYVVAPGQNA CCCCCCEEEEECCCCHHHHHHHHHCCCEEEEHHHCCCHHHHHHHHHHHHCCEEEECCCCC HLQQIDNELALYFAGKLSEFSVPLHLPGSEFAQQVWAELRQIPYGQTSTYGTIAARLGKP HHHHHCCCEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC GASRAVGLANGHNRLSIVVPCHRVIGADGSLTGYGGGQPRKAFLLRLENAAVQLTQQLAF CCCCEEEECCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCHHHHHEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2987251; 3887409; 9097040; 9278503; 2982792; 3536913; 3009022; 3529081; 1581309; 8202360; 8500619; 8156986 [H]