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The map label for this gene is fdhD [H]

Identifier: 77458375

GI number: 77458375

Start: 2431181

End: 2432023

Strand: Reverse

Name: fdhD [H]

Synonym: Pfl01_2148

Alternate gene names: 77458375

Gene position: 2432023-2431181 (Counterclockwise)

Preceding gene: 77458376

Following gene: 77458374

Centisome position: 37.77

GC content: 66.19

Gene sequence:

>843_bases
ATGCTGTGCCAAGTTGAACAACTCATCGAACCGGGCGACGCCAACGCCCCCGCGCCACAACCGGCGCAAGTGGCGTACCG
CGAATACCTCGACGACGCGCCGGTGTCCCACGCGGCGCTGGCGGCCGAAATCGCGCTAGCCATCAGCTACAACGGACTGA
ATCAGGCGGTGATGATGGTCTCGCCGGGCAACATCGAGGACTTCATTCGCGGCTTCAGCCTGAGCAACGCCATTGTCGAC
CGCCTCGACGATATCCACGACATCCGCCTGACCCATTTCGACCAGGCCTGCCAGGCCGACGTGCAGATTTCCAGCCGCGC
GTTCTGGGCTCTGAAGGATCATCGCCGGCAGATGGCGGGCACCAGCGGCTGCGGCCTCTGCGGCGTGGAAGCCCTTGAGC
AGGCGCTGCCGCAACTGGAGATCCTGACCCCGACACCGTTGCCACCCGCCGCGCATTTCAACGGCATCCGCCAGCGCATC
GAGCAGGCCCAGCAACTGGCCCGCAGCAGCGGTGCCCTGCACGCGGCGCTGTACTTCGACGCCGACGGCGAAGCACTGCT
GTGCCGCGAAGACATCGGCCGCCACAACGCCCTCGACAAGCTGATCGGCGCCTTGCAATTCGAAGGCCTCGATGCGCGCC
AGGGCTTCGTCGTGGTCACCAGCCGTTGCAGCCTCGAACTGATCCACAAAGCCGTGCGCGCACGCCTCGGCACCCTCGTC
AGCCTGTCCGCCCCTACTGCACTTACGGTGCGCTGGGCGCTCAAGCACCGCCTGAACCTGATCCACGTCCCGCACCGCAA
TGCCCCGCGAGTCTACAGCCCGATCCAGGAGCCCACCGCATGA

Upstream 100 bases:

>100_bases
TCATCGACCAATCCAATCACTGCATCGGAACAAGCGATTGGACGCACTTTTCCCTGCCCCGTAGCCTGAACCCACTTCAG
CGCTTCGTGGGACTTTCAAG

Downstream 100 bases:

>100_bases
GCAACACCCTCACCCACCTCGACGATCAGGGCCGCGCCAACATGGTCGACGTCAGCGACAAAGCCGCGACCCGCCGCGAA
GCCACTGCCCAGGCCTGGGT

Product: formate dehydrogenase subunit FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLCQVEQLIEPGDANAPAPQPAQVAYREYLDDAPVSHAALAAEIALAISYNGLNQAVMMVSPGNIEDFIRGFSLSNAIVD
RLDDIHDIRLTHFDQACQADVQISSRAFWALKDHRRQMAGTSGCGLCGVEALEQALPQLEILTPTPLPPAAHFNGIRQRI
EQAQQLARSSGALHAALYFDADGEALLCREDIGRHNALDKLIGALQFEGLDARQGFVVVTSRCSLELIHKAVRARLGTLV
SLSAPTALTVRWALKHRLNLIHVPHRNAPRVYSPIQEPTA

Sequences:

>Translated_280_residues
MLCQVEQLIEPGDANAPAPQPAQVAYREYLDDAPVSHAALAAEIALAISYNGLNQAVMMVSPGNIEDFIRGFSLSNAIVD
RLDDIHDIRLTHFDQACQADVQISSRAFWALKDHRRQMAGTSGCGLCGVEALEQALPQLEILTPTPLPPAAHFNGIRQRI
EQAQQLARSSGALHAALYFDADGEALLCREDIGRHNALDKLIGALQFEGLDARQGFVVVTSRCSLELIHKAVRARLGTLV
SLSAPTALTVRWALKHRLNLIHVPHRNAPRVYSPIQEPTA
>Mature_280_residues
MLCQVEQLIEPGDANAPAPQPAQVAYREYLDDAPVSHAALAAEIALAISYNGLNQAVMMVSPGNIEDFIRGFSLSNAIVD
RLDDIHDIRLTHFDQACQADVQISSRAFWALKDHRRQMAGTSGCGLCGVEALEQALPQLEILTPTPLPPAAHFNGIRQRI
EQAQQLARSSGALHAALYFDADGEALLCREDIGRHNALDKLIGALQFEGLDARQGFVVVTSRCSLELIHKAVRARLGTLV
SLSAPTALTVRWALKHRLNLIHVPHRNAPRVYSPIQEPTA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=240, Percent_Identity=35.4166666666667, Blast_Score=138, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 30538; Mature: 30538

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCQVEQLIEPGDANAPAPQPAQVAYREYLDDAPVSHAALAAEIALAISYNGLNQAVMMV
CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCCCEEEEE
SPGNIEDFIRGFSLSNAIVDRLDDIHDIRLTHFDQACQADVQISSRAFWALKDHRRQMAG
CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHCC
TSGCGLCGVEALEQALPQLEILTPTPLPPAAHFNGIRQRIEQAQQLARSSGALHAALYFD
CCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
ADGEALLCREDIGRHNALDKLIGALQFEGLDARQGFVVVTSRCSLELIHKAVRARLGTLV
CCCCEEEEHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHE
SLSAPTALTVRWALKHRLNLIHVPHRNAPRVYSPIQEPTA
EECCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLCQVEQLIEPGDANAPAPQPAQVAYREYLDDAPVSHAALAAEIALAISYNGLNQAVMMV
CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCCCEEEEE
SPGNIEDFIRGFSLSNAIVDRLDDIHDIRLTHFDQACQADVQISSRAFWALKDHRRQMAG
CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHCC
TSGCGLCGVEALEQALPQLEILTPTPLPPAAHFNGIRQRIEQAQQLARSSGALHAALYFD
CCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
ADGEALLCREDIGRHNALDKLIGALQFEGLDARQGFVVVTSRCSLELIHKAVRARLGTLV
CCCCEEEEHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHE
SLSAPTALTVRWALKHRLNLIHVPHRNAPRVYSPIQEPTA
EECCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA