| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458338
Identifier: 77458338
GI number: 77458338
Start: 2398311
End: 2399381
Strand: Direct
Name: 77458338
Synonym: Pfl01_2111
Alternate gene names: NA
Gene position: 2398311-2399381 (Clockwise)
Preceding gene: 77458337
Following gene: 77458340
Centisome position: 37.25
GC content: 56.4
Gene sequence:
>1071_bases ATGAACATGCCAGTCACTTCGCTTCTTCGCCGGTCTTCGGCATTTTTCGGCTTGATGGTGTCCCTCTCGGGGCTTGTCGG TTGCGCGCTGACAGGAACCTATCAGGACGCCACCGGGCCCGACGCCGCCAAGATGCGTTTTGTGGCCAACACTGACAATG CCACCGTCAATTACTTCGACGCCGAGCATTGCGATGGCATGACCACCGGCATCCTGAACAATTTATTTGTCAGAGACAGT CCGCGGCGGGTAGGCATGACCGTGGCGCCTCCAGAGAAGGCCCGTGGTTATCTGGAAGTGAAGTTACCGCCCGAAAAGGA AGTGTTCCTGCAGGTCAATACCCAAGTGGGCTATGGCGTGTGTGGCGCGGTGTTCAGTTTCAGGCCTGAGCGCGCAACGG AGTATGAACTCACCTTCGAACTCAAGGGCAGCCAATGCTCGACATTGATGCAGCGCCTGCAACGGGTTGATGGCAAGGAT GTGCGTACACCCGTCACTATCAGGCGCGATGGATTTGCCGCTTGCGAGGGTCGCAACCCGATCTTTCCGAAACCACCCGC GCTGCTGCCCGATACGCCGGAGCGCACGGCAATGATCGACCGGATCATCGACGGGAGTGCTTTCGTACTCATGAAGTCCG GGTCGGATCAAAAGCCTGTAGCAGCCTTTACTCCCGAAAAACTTGATGCGCTGATCAGCGAGCGCAAGGTCAAACTGGGT TTTGACATGCCAGAGGATTACTGGACGTTGTATCGCCAGAACCTGATCGAATTCGGTAATGAGACGGCGGCCGCTCAAGC TCAAACTCTGGAGCGCTCCACCAATGAGTATCGGCAACGTCTGCGCAGCGCTGAAGACAAGCAACTCAGAGAGTGGTCCC GTGCTGACGATTCCTCTGGCAAACCTGGCAACGCAGCGCCGGCCGATCAGGAAAAGTCGATGATTGTGTATTACTTCCAG ACGTCCAGAGCCGTGACATTGGAAGCGGTGAACCATCACATGGACCGCATGGCAAAAATGGATGCGCAATACAACGTTTG CTCGCGCTATGCCGAGTGCTGGAAACGCTGA
Upstream 100 bases:
>100_bases GATGATGATTGATCAAAGCTGAACAGGCAGGTTTTGAGGGAATGGACGCAATAGTGGCAATTCAGTAGCATCGCGGCTTT TCCCGGCCTTTCCCTCAAGG
Downstream 100 bases:
>100_bases TGGGTCAGGCACATCCAGTGCAATGGACTGGCCTGTTCCAGTCGGCGTGTTCAGTGATGCGAATTAAAAATGAGCGCTCG CCCGGACGCTGGATCGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MNMPVTSLLRRSSAFFGLMVSLSGLVGCALTGTYQDATGPDAAKMRFVANTDNATVNYFDAEHCDGMTTGILNNLFVRDS PRRVGMTVAPPEKARGYLEVKLPPEKEVFLQVNTQVGYGVCGAVFSFRPERATEYELTFELKGSQCSTLMQRLQRVDGKD VRTPVTIRRDGFAACEGRNPIFPKPPALLPDTPERTAMIDRIIDGSAFVLMKSGSDQKPVAAFTPEKLDALISERKVKLG FDMPEDYWTLYRQNLIEFGNETAAAQAQTLERSTNEYRQRLRSAEDKQLREWSRADDSSGKPGNAAPADQEKSMIVYYFQ TSRAVTLEAVNHHMDRMAKMDAQYNVCSRYAECWKR
Sequences:
>Translated_356_residues MNMPVTSLLRRSSAFFGLMVSLSGLVGCALTGTYQDATGPDAAKMRFVANTDNATVNYFDAEHCDGMTTGILNNLFVRDS PRRVGMTVAPPEKARGYLEVKLPPEKEVFLQVNTQVGYGVCGAVFSFRPERATEYELTFELKGSQCSTLMQRLQRVDGKD VRTPVTIRRDGFAACEGRNPIFPKPPALLPDTPERTAMIDRIIDGSAFVLMKSGSDQKPVAAFTPEKLDALISERKVKLG FDMPEDYWTLYRQNLIEFGNETAAAQAQTLERSTNEYRQRLRSAEDKQLREWSRADDSSGKPGNAAPADQEKSMIVYYFQ TSRAVTLEAVNHHMDRMAKMDAQYNVCSRYAECWKR >Mature_356_residues MNMPVTSLLRRSSAFFGLMVSLSGLVGCALTGTYQDATGPDAAKMRFVANTDNATVNYFDAEHCDGMTTGILNNLFVRDS PRRVGMTVAPPEKARGYLEVKLPPEKEVFLQVNTQVGYGVCGAVFSFRPERATEYELTFELKGSQCSTLMQRLQRVDGKD VRTPVTIRRDGFAACEGRNPIFPKPPALLPDTPERTAMIDRIIDGSAFVLMKSGSDQKPVAAFTPEKLDALISERKVKLG FDMPEDYWTLYRQNLIEFGNETAAAQAQTLERSTNEYRQRLRSAEDKQLREWSRADDSSGKPGNAAPADQEKSMIVYYFQ TSRAVTLEAVNHHMDRMAKMDAQYNVCSRYAECWKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39912; Mature: 39912
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMPVTSLLRRSSAFFGLMVSLSGLVGCALTGTYQDATGPDAAKMRFVANTDNATVNYFD CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHEEEEEEECCCCEEEEEC AEHCDGMTTGILNNLFVRDSPRRVGMTVAPPEKARGYLEVKLPPEKEVFLQVNTQVGYGV HHHCCCHHHHHHHHHHCCCCCCCCCEEECCHHHCCCEEEEECCCCCEEEEEEECCCCCHH CGAVFSFRPERATEYELTFELKGSQCSTLMQRLQRVDGKDVRTPVTIRRDGFAACEGRNP HHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCCCC IFPKPPALLPDTPERTAMIDRIIDGSAFVLMKSGSDQKPVAAFTPEKLDALISERKVKLG CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEEECHHHHHHHHHCCCEEEC FDMPEDYWTLYRQNLIEFGNETAAAQAQTLERSTNEYRQRLRSAEDKQLREWSRADDSSG CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC KPGNAAPADQEKSMIVYYFQTSRAVTLEAVNHHMDRMAKMDAQYNVCSRYAECWKR CCCCCCCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MNMPVTSLLRRSSAFFGLMVSLSGLVGCALTGTYQDATGPDAAKMRFVANTDNATVNYFD CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHEEEEEEECCCCEEEEEC AEHCDGMTTGILNNLFVRDSPRRVGMTVAPPEKARGYLEVKLPPEKEVFLQVNTQVGYGV HHHCCCHHHHHHHHHHCCCCCCCCCEEECCHHHCCCEEEEECCCCCEEEEEEECCCCCHH CGAVFSFRPERATEYELTFELKGSQCSTLMQRLQRVDGKDVRTPVTIRRDGFAACEGRNP HHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCCCC IFPKPPALLPDTPERTAMIDRIIDGSAFVLMKSGSDQKPVAAFTPEKLDALISERKVKLG CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEEECHHHHHHHHHCCCEEEC FDMPEDYWTLYRQNLIEFGNETAAAQAQTLERSTNEYRQRLRSAEDKQLREWSRADDSSG CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC KPGNAAPADQEKSMIVYYFQTSRAVTLEAVNHHMDRMAKMDAQYNVCSRYAECWKR CCCCCCCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA