| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458308
Identifier: 77458308
GI number: 77458308
Start: 2367067
End: 2367906
Strand: Direct
Name: 77458308
Synonym: Pfl01_2081
Alternate gene names: NA
Gene position: 2367067-2367906 (Clockwise)
Preceding gene: 77458307
Following gene: 77458309
Centisome position: 36.76
GC content: 63.33
Gene sequence:
>840_bases ATGCAGATTCCCCACCCCTCCTTGCAGGCCAGCGTCGGGCTCGGCCTGCGTCGCGGTCTGATGAAAGACCTGCAGGCCGC CCGCACCGGCGATTTCGATTTTCTGGAAGTCGCCCCGGAAAACTGGATCGGCGTCGGCGGTGCCCATGGCGCCGCGTTGC GCGAACTGGCCGAGCGCTATCCGTTGTCCTGCCACGGATTGTCGTTGTCGCTCGGCGGCTCGGCGCCGCTGGACGTGGAT TTTCTCCGGGAAGTGCGGACCTTCCTCGATCATCACAAAGTGCCGCTGTACAGCGAACATCTGAGCTATTGCAGCGACGA CGGTCATCTCTATGACCTGCTGCCGTTGCCTTTCACCGAAGAAGCGGTGCACCACGTCGCCGCTCGGGTCCGCCAGGCCC AGGACATTCTTGGCCGGCGTCTGGCGGTGGAAAACGTTTCCTACTACGCCGCGCCCCGGCAGGACATGGACGAAGTGACC TTCACCAACGCCGTGCTGCGCGAGGCCGATTGCGACCTGCTGCTGGACGTGAACAACGTCTACGTCAACTCGATCAACCA CGGTTTCGATCCGCAGACGTTCCTGGCTGCGATTGAGCCGGGCCGGGTGGTCGGCATGCACGTGGCCGGGCACTTCGACG AGTCCGACACGCTGAAGATCGATACCCACGGCGCCTCGGTCAAACCGGTGGTCTGGTCGTTGCTGGCCGACGCCTATGCC CGATTCGGTGCGCAGCCGACGTTGCTGGAGCGGGATTTCAATTTCCCGGCGTTTTCTGAACTGGTGGCCGAGTTGCAAAC CATCCGCCGCCTGCAAACCGAAGGAGGCCCGCGTGGATAA
Upstream 100 bases:
>100_bases CCACTTCCCGCGCATTGCCCACACAGCCGCGATACACCCGCCGGTTTTACTGAACCTGTCAGTCGCCACGCCCGGCGGCT CCTCAGCAGAGATCTTGCCC
Downstream 100 bases:
>100_bases TCTTCTGCGGCAACAACAGGCCCTGACCCGCTATTTGCGCGATCCAGAACATGAAGCGCTGCCGGCCGGCATGAACGCGG CGCGGGTCAATGTCTATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MQIPHPSLQASVGLGLRRGLMKDLQAARTGDFDFLEVAPENWIGVGGAHGAALRELAERYPLSCHGLSLSLGGSAPLDVD FLREVRTFLDHHKVPLYSEHLSYCSDDGHLYDLLPLPFTEEAVHHVAARVRQAQDILGRRLAVENVSYYAAPRQDMDEVT FTNAVLREADCDLLLDVNNVYVNSINHGFDPQTFLAAIEPGRVVGMHVAGHFDESDTLKIDTHGASVKPVVWSLLADAYA RFGAQPTLLERDFNFPAFSELVAELQTIRRLQTEGGPRG
Sequences:
>Translated_279_residues MQIPHPSLQASVGLGLRRGLMKDLQAARTGDFDFLEVAPENWIGVGGAHGAALRELAERYPLSCHGLSLSLGGSAPLDVD FLREVRTFLDHHKVPLYSEHLSYCSDDGHLYDLLPLPFTEEAVHHVAARVRQAQDILGRRLAVENVSYYAAPRQDMDEVT FTNAVLREADCDLLLDVNNVYVNSINHGFDPQTFLAAIEPGRVVGMHVAGHFDESDTLKIDTHGASVKPVVWSLLADAYA RFGAQPTLLERDFNFPAFSELVAELQTIRRLQTEGGPRG >Mature_279_residues MQIPHPSLQASVGLGLRRGLMKDLQAARTGDFDFLEVAPENWIGVGGAHGAALRELAERYPLSCHGLSLSLGGSAPLDVD FLREVRTFLDHHKVPLYSEHLSYCSDDGHLYDLLPLPFTEEAVHHVAARVRQAQDILGRRLAVENVSYYAAPRQDMDEVT FTNAVLREADCDLLLDVNNVYVNSINHGFDPQTFLAAIEPGRVVGMHVAGHFDESDTLKIDTHGASVKPVVWSLLADAYA RFGAQPTLLERDFNFPAFSELVAELQTIRRLQTEGGPRG
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007801 - InterPro: IPR013022 [H]
Pfam domain/function: PF05114 DUF692 [H]
EC number: NA
Molecular weight: Translated: 30779; Mature: 30779
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIPHPSLQASVGLGLRRGLMKDLQAARTGDFDFLEVAPENWIGVGGAHGAALRELAERY CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCHHHHHHHHHHC PLSCHGLSLSLGGSAPLDVDFLREVRTFLDHHKVPLYSEHLSYCSDDGHLYDLLPLPFTE CCEECCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCCCCCH EAVHHVAARVRQAQDILGRRLAVENVSYYAAPRQDMDEVTFTNAVLREADCDLLLDVNNV HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCE YVNSINHGFDPQTFLAAIEPGRVVGMHVAGHFDESDTLKIDTHGASVKPVVWSLLADAYA EEECCCCCCCHHHHHEECCCCCEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHH RFGAQPTLLERDFNFPAFSELVAELQTIRRLQTEGGPRG HHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQIPHPSLQASVGLGLRRGLMKDLQAARTGDFDFLEVAPENWIGVGGAHGAALRELAERY CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCHHHHHHHHHHC PLSCHGLSLSLGGSAPLDVDFLREVRTFLDHHKVPLYSEHLSYCSDDGHLYDLLPLPFTE CCEECCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCCCCCH EAVHHVAARVRQAQDILGRRLAVENVSYYAAPRQDMDEVTFTNAVLREADCDLLLDVNNV HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCE YVNSINHGFDPQTFLAAIEPGRVVGMHVAGHFDESDTLKIDTHGASVKPVVWSLLADAYA EEECCCCCCCHHHHHEECCCCCEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHH RFGAQPTLLERDFNFPAFSELVAELQTIRRLQTEGGPRG HHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA