| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458306
Identifier: 77458306
GI number: 77458306
Start: 2364224
End: 2365270
Strand: Reverse
Name: 77458306
Synonym: Pfl01_2079
Alternate gene names: NA
Gene position: 2365270-2364224 (Counterclockwise)
Preceding gene: 77458310
Following gene: 77458305
Centisome position: 36.74
GC content: 62.46
Gene sequence:
>1047_bases ATGGACGAGGCCAGACTCAACGAATTCATGGGCAAACTGGTCAACGACATGGGCGGCGCGGCGATGCTGGCCAATGTCAT TGTCGGCGAAGAACTCGGCCTTTACCGGGCGATGGCCGACAGTCAGCCGATCAGCCCCGAAACCCTTGCCGAAAAAACCA CCTGCAACCCGCGACTGGTGCGCGAATGGCTGAGCGCCCACGCGGCGTCCGGCTACATGGAACACCACGACGGCAAGTTT CGTTTGCCGGAAGAACAGGCGCTGGCCCTGGCCAAGGAAGATTCGCCGGTGTACGTGGCCGGCGGCCTCGGCGTGGTGGC ATCGTTTTTCCATGACAAGGACAAACTGGTCAAAGCCATGCGCGGCAACGGCGCCCTGCCGTGGGGTGATCACCATCCGT GCATGTTCACCGGCACCGAGCGCTTTTTCCGCCCCGGCTACAAGGGGCATTTGATCGCCGAATGGCTGCCGGCGCTGGAC GGTGTGGTGGCCAAACTCGAAGCAGGCGCCAAGGTCGCCGATATCGGCTGCGGTCATGGTGCGTCCACGGTGATCATGGC CCAGGCCTATCCCAACTCGCGGTTCGTCGGCTTCGACTATCACGCGCCTTCGATCACCGTCGCCACCCAACGGGCCGAAG AAGGCGGCGTCAGCAGTCGCGCGCGGTTCTTCCAGGGCACGGCGAAAAGCTATCCCGGCGATGACTATGACCTGATCTGC TATTTCGACTGCCTGCACGACATGGGCGATCCGGTCGGTGCGGCGAAGCATGCGTTTGAATCGTTGAAGGACGACGGCAC AGTGCTGCTGGTCGAGCCGTTTGCCAACGACACCCTGGACGAAAACATCACGCCGGTCGGGCGCTTGTTCTATGCGGCAT CGACGTTCATTTGCACGCCGAACTCGCTGTCCCAGGAAGTGGGCCTCGGCCTTGGTGCGCAGGCGGGCGAGTCACGCTTG CGCAAGGTGTTTACCGAAGCCGGCTTCAAACACTTCCGGCGGGCGACGCAGACGCCGTTCAACCTGATTCTGGAGGCGCG CAAGTAA
Upstream 100 bases:
>100_bases CAGCAGTGTCGCCCTGCCCGTTTCCACGACCACCGCCCGGTGGTGAATGCCTCGACCCCCAACGCCACCGGACTGTGATT CTGTCAAAGGAGCACATGAA
Downstream 100 bases:
>100_bases AAACCGGGCACAGGACGCGCCTGCCGGGGAGCGTCCGTCAGTGCTAACCTGCAAGGCACTTTTCGCCTGCGGAGCGCTGA TCATGCTCGACCGTCCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; Transcriptional Regulator; Transcriptional Regulatory Protein; SAM-Dependent Methyltransferase; S-Adenosylmethionine-Dependent Methyltransferase; Methyltransferase Protein; Methyltransferase Domain Family
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MDEARLNEFMGKLVNDMGGAAMLANVIVGEELGLYRAMADSQPISPETLAEKTTCNPRLVREWLSAHAASGYMEHHDGKF RLPEEQALALAKEDSPVYVAGGLGVVASFFHDKDKLVKAMRGNGALPWGDHHPCMFTGTERFFRPGYKGHLIAEWLPALD GVVAKLEAGAKVADIGCGHGASTVIMAQAYPNSRFVGFDYHAPSITVATQRAEEGGVSSRARFFQGTAKSYPGDDYDLIC YFDCLHDMGDPVGAAKHAFESLKDDGTVLLVEPFANDTLDENITPVGRLFYAASTFICTPNSLSQEVGLGLGAQAGESRL RKVFTEAGFKHFRRATQTPFNLILEARK
Sequences:
>Translated_348_residues MDEARLNEFMGKLVNDMGGAAMLANVIVGEELGLYRAMADSQPISPETLAEKTTCNPRLVREWLSAHAASGYMEHHDGKF RLPEEQALALAKEDSPVYVAGGLGVVASFFHDKDKLVKAMRGNGALPWGDHHPCMFTGTERFFRPGYKGHLIAEWLPALD GVVAKLEAGAKVADIGCGHGASTVIMAQAYPNSRFVGFDYHAPSITVATQRAEEGGVSSRARFFQGTAKSYPGDDYDLIC YFDCLHDMGDPVGAAKHAFESLKDDGTVLLVEPFANDTLDENITPVGRLFYAASTFICTPNSLSQEVGLGLGAQAGESRL RKVFTEAGFKHFRRATQTPFNLILEARK >Mature_348_residues MDEARLNEFMGKLVNDMGGAAMLANVIVGEELGLYRAMADSQPISPETLAEKTTCNPRLVREWLSAHAASGYMEHHDGKF RLPEEQALALAKEDSPVYVAGGLGVVASFFHDKDKLVKAMRGNGALPWGDHHPCMFTGTERFFRPGYKGHLIAEWLPALD GVVAKLEAGAKVADIGCGHGASTVIMAQAYPNSRFVGFDYHAPSITVATQRAEEGGVSSRARFFQGTAKSYPGDDYDLIC YFDCLHDMGDPVGAAKHAFESLKDDGTVLLVEPFANDTLDENITPVGRLFYAASTFICTPNSLSQEVGLGLGAQAGESRL RKVFTEAGFKHFRRATQTPFNLILEARK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17562972, Length=359, Percent_Identity=28.9693593314763, Blast_Score=131, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17562552, Length=345, Percent_Identity=26.9565217391304, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17562982, Length=341, Percent_Identity=26.9794721407625, Blast_Score=111, Evalue=7e-25, Organism=Caenorhabditis elegans, GI193208453, Length=225, Percent_Identity=27.5555555555556, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37796; Mature: 37796
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEARLNEFMGKLVNDMGGAAMLANVIVGEELGLYRAMADSQPISPETLAEKTTCNPRLV CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHHH REWLSAHAASGYMEHHDGKFRLPEEQALALAKEDSPVYVAGGLGVVASFFHDKDKLVKAM HHHHHHHHHCCCHHHCCCCEECCHHHHHHHCCCCCCEEEECCHHHHHHHHHCHHHHHHHH RGNGALPWGDHHPCMFTGTERFFRPGYKGHLIAEWLPALDGVVAKLEAGAKVADIGCGHG HCCCCCCCCCCCCEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCC ASTVIMAQAYPNSRFVGFDYHAPSITVATQRAEEGGVSSRARFFQGTAKSYPGDDYDLIC CCEEEEEEECCCCEEEEEECCCCEEEEEECCHHHCCCHHHHHHHHCCCCCCCCCCCEEEE YFDCLHDMGDPVGAAKHAFESLKDDGTVLLVEPFANDTLDENITPVGRLFYAASTFICTP HHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHEEECC NSLSQEVGLGLGAQAGESRLRKVFTEAGFKHFRRATQTPFNLILEARK CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCC >Mature Secondary Structure MDEARLNEFMGKLVNDMGGAAMLANVIVGEELGLYRAMADSQPISPETLAEKTTCNPRLV CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHHH REWLSAHAASGYMEHHDGKFRLPEEQALALAKEDSPVYVAGGLGVVASFFHDKDKLVKAM HHHHHHHHHCCCHHHCCCCEECCHHHHHHHCCCCCCEEEECCHHHHHHHHHCHHHHHHHH RGNGALPWGDHHPCMFTGTERFFRPGYKGHLIAEWLPALDGVVAKLEAGAKVADIGCGHG HCCCCCCCCCCCCEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCC ASTVIMAQAYPNSRFVGFDYHAPSITVATQRAEEGGVSSRARFFQGTAKSYPGDDYDLIC CCEEEEEEECCCCEEEEEECCCCEEEEEECCHHHCCCHHHHHHHHCCCCCCCCCCCEEEE YFDCLHDMGDPVGAAKHAFESLKDDGTVLLVEPFANDTLDENITPVGRLFYAASTFICTP HHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHEEECC NSLSQEVGLGLGAQAGESRLRKVFTEAGFKHFRRATQTPFNLILEARK CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA